Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08360 Brassica napus
A03p21970 Brassica napus
A04p00210 Brassica napus
A05p07140 Brassica napus
A07p22380 Brassica napus
A09p47940 Brassica napus
A09p55000 Brassica napus
Aa31LG10G17030 Aethionema arabicum
Aa31LG2G20740 Aethionema arabicum
Aa31LG5G20220 Aethionema arabicum
Aa31sc43G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.237 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1781 Anthoceros agrestis
Actinidia00756 Actinidia chinensis
Actinidia09136 Actinidia chinensis
Actinidia13471 Actinidia chinensis
Actinidia21115 Actinidia chinensis
Actinidia24892 Actinidia chinensis
Actinidia32450 Actinidia chinensis
Actinidia38275 Actinidia chinensis
Actinidia38850 Actinidia chinensis
Ah.08g215980 Amaranthus hybridus
Ah.16g106380 Amaranthus hybridus
AL4G36530 Arabidopsis lyrata
AL5G36060 Arabidopsis lyrata
AL5G46050 Arabidopsis lyrata
AL7G22450 Arabidopsis lyrata
Aqoxy1G01247 Aquilegia oxysepala
Aqoxy4G00200 Aquilegia oxysepala
Aqoxy4G00202 Aquilegia oxysepala
Aqoxy4G00203 Aquilegia oxysepala
Aqoxy5G00498 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1SUT9Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5U4S75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D7XM6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HLIX3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7DA1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KDTA1N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MNS73A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PPIL2T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4J3I9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W7LA7X Arachis hypogaea
AT2G39220 Arabidopsis thaliana
AT3G54950 Arabidopsis thaliana
AT3G63200 Arabidopsis thaliana
AT4G29800 Arabidopsis thaliana
ATR0100G014 Amborella trichopoda
ATR0115G005 Amborella trichopoda
ATR0626G403 Amborella trichopoda
ATR1098G112 Amborella trichopoda
Atru.chr10.650 Acer truncatum
Atru.chr12.741 Acer truncatum
Atru.chr12.763 Acer truncatum
Atru.chr5.1444 Acer truncatum
AUR62009797 Chenopodium quinoa
AUR62039245 Chenopodium quinoa
BcaB01g03608 Brassica carinata
BcaB01g03657 Brassica carinata
BcaB02g07709 Brassica carinata
BcaB02g08076 Brassica carinata
BcaB02g09139 Brassica carinata
BcaC02g10344 Brassica carinata
BcaC02g12044 Brassica carinata
BcaC07g40799 Brassica carinata
BcaC07g42704 Brassica carinata
BcaC08g44711 Brassica carinata
BcaC09g50633 Brassica carinata
BcaC09g51758 Brassica carinata
BolC1t00928H Brassica oleracea
BolC3t14990H Brassica oleracea
BolC4t22450H Brassica oleracea
BolC4t24534H Brassica oleracea
BolC6t37433H Brassica oleracea
BolC8t50624H Brassica oleracea
BolC8t51369H Brassica oleracea
BraA01t00784Z Brassica rapa
BraA03t11432Z Brassica rapa
BraA04t15740Z Brassica rapa
BraA05t19679Z Brassica rapa
BraA07t29913Z Brassica rapa
BraA09t40249Z Brassica rapa
BraA09t40909Z Brassica rapa
C01p09400 Brassica napus
C03p26060 Brassica napus
C04p08530 Brassica napus
C04p30010 Brassica napus
C06p22460 Brassica napus
C08p30180 Brassica napus
C08p37910 Brassica napus
CAN.G128.63 Capsicum annuum
CAN.G1549.3 Capsicum annuum
CAN.G232.1 Capsicum annuum
CAN.G694.79 Capsicum annuum
CAN.G960.50 Capsicum annuum
CANSAT25G0266 Cannabis sativa
CANSAT35G0394 Cannabis sativa
CARHR133980 Cardamine hirsuta
CARHR164930 Cardamine hirsuta
CARHR237700 Cardamine hirsuta
CARHR291740 Cardamine hirsuta
Carub.0004s1483 Capsella rubella
Carub.0004s2126 Capsella rubella
Carub.0005s2156 Capsella rubella
Carub.0005s2987 Capsella rubella
Ca_00799_v3 Cicer arietinum L.
Ca_08600_v3 Cicer arietinum L.
Ca_09755_v3 Cicer arietinum L.
Ca_10572_v3 Cicer arietinum L.
Ca_21496_v3 Cicer arietinum L.
Ca_29595_v3 Cicer arietinum L.
Ca_30358_v3 Cicer arietinum L.
Cc01_g19430 Coffea canephora
Cc03_g08960 Coffea canephora
Cc06_g22950 Coffea canephora
Cc09_g02050 Coffea canephora
CDE02G2948 Ceratophyllum demersum
CDE04G0881 Ceratophyllum demersum
CDE04G1818 Ceratophyllum demersum
CDE05G2019 Ceratophyllum demersum
CDE05G2731 Ceratophyllum demersum
CDE07G0356 Ceratophyllum demersum
Cfa006145 Carpinus fangiana
Cfa006353 Carpinus fangiana
Cfa021505 Carpinus fangiana
Ciclev10015299m.g Citrus clementina
Ciclev10020528m.g Citrus clementina
Ciclev10031470m.g Citrus clementina
CiPaw.01G273400 Carya illinoinensis
CiPaw.02G174200 Carya illinoinensis
CiPaw.08G105400 Carya illinoinensis
CiPaw.09G150000 Carya illinoinensis
CiPaw.10G111500 Carya illinoinensis
ClCG01G025470 Citrullus lanatus
ClCG05G020960 Citrullus lanatus
ClCG08G007460 Citrullus lanatus
ClCG09G007070 Citrullus lanatus
COL.COLO4_09089 Corchorus olitorius
COL.COLO4_22874 Corchorus olitorius
COL.COLO4_23688 Corchorus olitorius
Cpa.g.sc52.39 Carica papaya
Cpa.g.sc53.72 Carica papaya
CsaV3_5G036350 Cucumis sativus L.
CsaV3_6G036370 Cucumis sativus L.
CsaV3_6G052720 Cucumis sativus L.
CsaV3_7G028100 Cucumis sativus L.
CSS0000251 Camellia sinensis var. sinensis
CSS0001595 Camellia sinensis var. sinensis
CSS0028197 Camellia sinensis var. sinensis
CSS0032226 Camellia sinensis var. sinensis
CSS0037036 Camellia sinensis var. sinensis
DCAR_001339 Daucus carota
DCAR_002730 Daucus carota
DCAR_003805 Daucus carota
DCAR_004312 Daucus carota
DCAR_006443 Daucus carota
DCAR_007798 Daucus carota
DCAR_010305 Daucus carota
DCAR_012479 Daucus carota
DCAR_018051 Daucus carota
Dinv06333 Davidia involucrata
Dinv11779 Davidia involucrata
Dinv31328 Davidia involucrata
Dinv32931 Davidia involucrata
Dinv34757 Davidia involucrata
Duzib106G0841 Durio zibethinus
Duzib114G0874 Durio zibethinus
Duzib128G1776 Durio zibethinus
Duzib133G1407 Durio zibethinus
Duzib138G0504 Durio zibethinus
Duzib235G0085 Durio zibethinus
ECA232G1667 Erigeron canadensis
ECA233G2902 Erigeron canadensis
ECA238G0177 Erigeron canadensis
ECA238G2459 Erigeron canadensis
ECA247G1219 Erigeron canadensis
ECA248G3909 Erigeron canadensis
EL10Ac2g03250 Beta vulgaris
EL10Ac5g12038 Beta vulgaris
EL10Ac7g15789 Beta vulgaris
EL10Ac7g16980 Beta vulgaris
Eucgr.D01034 Eucalyptus grandis
Eucgr.G02825 Eucalyptus grandis
Eucgr.H01476 Eucalyptus grandis
Eucgr.J01089 Eucalyptus grandis
FAN01G2314 Fragaria x ananassa
FAN03G1090 Fragaria x ananassa
FAN04G2350 Fragaria x ananassa
FAN06G1395 Fragaria x ananassa
FAN06G3989 Fragaria x ananassa
FAN10G1448 Fragaria x ananassa
FAN10G1474 Fragaria x ananassa
FAN10G3801 Fragaria x ananassa
FAN15G0387 Fragaria x ananassa
FAN16G2924 Fragaria x ananassa
FAN20G0917 Fragaria x ananassa
FAN21G3746 Fragaria x ananassa
FAN24G1059 Fragaria x ananassa
FAN25G1902 Fragaria x ananassa
FAN25G3502 Fragaria x ananassa
FAN27G3051 Fragaria x ananassa
FvH4_2g23520 Fragaria vesca
FvH4_3g11650 Fragaria vesca
FvH4_7g19660 Fragaria vesca
Glyma.02G147100 Glycine max
Glyma.03G154200 Glycine max
Glyma.09G022000 Glycine max
Glyma.10G026800 Glycine max
Glyma.10G211300 Glycine max
Glyma.15G128300 Glycine max
Glyma.19G156700 Glycine max
Glyma.20G179600 Glycine max
Gohir.A05G113100 Gossypium hirsutum
Gohir.A05G412700 Gossypium hirsutum
Gohir.A08G186000 Gossypium hirsutum
Gohir.A10G206300 Gossypium hirsutum
Gohir.A11G122900 Gossypium hirsutum
Gohir.A12G004900 Gossypium hirsutum
Gohir.D04G003300 Gossypium hirsutum
Gohir.D05G113600 Gossypium hirsutum
Gohir.D08G204100 Gossypium hirsutum
Gohir.D10G214400 Gossypium hirsutum
Gohir.D11G128200 Gossypium hirsutum
Gohir.D12G004500 Gossypium hirsutum
Gorai.004G216100 Gossypium raimondii
Gorai.007G137100 Gossypium raimondii
Gorai.008G004400 Gossypium raimondii
Gorai.009G117600 Gossypium raimondii
Gorai.011G240000 Gossypium raimondii
Gorai.012G004400 Gossypium raimondii
GSVIVG01001146001 Vitis vinifera
GSVIVG01016286001 Vitis vinifera
GSVIVG01037945001 Vitis vinifera
HanXRQChr08g0218941 Helianthus annuus
HanXRQChr09g0245241 Helianthus annuus
HanXRQChr09g0249691 Helianthus annuus
HanXRQChr09g0258061 Helianthus annuus
HanXRQChr12g0368831 Helianthus annuus
HanXRQChr14g0456931 Helianthus annuus
HanXRQChr15g0466701 Helianthus annuus
HanXRQChr15g0496651 Helianthus annuus
Haze_00810 Corylus avellana
Haze_04705 Corylus avellana
Haze_13631 Corylus avellana
Haze_16898 Corylus avellana
Hma1.2p1_0822F.1_g224520 Hydrangea macrophylla
HPP92_012193 Vanilla planifolia
HPP92_012664 Vanilla planifolia
HPP92_013910 Vanilla planifolia
HPP92_013991 Vanilla planifolia
HPP92_015682 Vanilla planifolia
HPP92_026342 Vanilla planifolia
HPP92_026343 Vanilla planifolia
Hund12042 Selenicereus undatus
Hund18736 Selenicereus undatus
Hund20867 Selenicereus undatus
Lalb_Chr02g0142161 Lupinus albus
Lalb_Chr02g0142761 Lupinus albus
Lalb_Chr06g0162281 Lupinus albus
Lalb_Chr06g0162981 Lupinus albus
Lalb_Chr15g0088701 Lupinus albus
Lalb_Chr18g0057861 Lupinus albus
Lalb_Chr20g0119971 Lupinus albus
Lalb_Chr21g0306061 Lupinus albus
Lj1A46T44 Lonicera japonica
Lj1A914G41 Lonicera japonica
Lj1g0002717 Lotus japonicus
Lj2A1172T33 Lonicera japonica
Lj2A339T48 Lonicera japonica
Lj5g0011033 Lotus japonicus
Lj5g0027760 Lotus japonicus
Lj6g0008480 Lotus japonicus
Lsat_1_v5_gn_2_114320 Lactuca sativa
Lsat_1_v5_gn_2_60440 Lactuca sativa
Lsat_1_v5_gn_5_188060 Lactuca sativa
Lsat_1_v5_gn_8_119240 Lactuca sativa
Lsat_1_v5_gn_8_167121 Lactuca sativa
Lsat_1_v5_gn_8_19340 Lactuca sativa
Lsat_1_v5_gn_9_3620 Lactuca sativa
Lsat_1_v5_gn_9_69360 Lactuca sativa
Manes.01G207400 Manihot esculenta
Manes.03G069632 Manihot esculenta
Manes.05G076900 Manihot esculenta
Manes.07G101200 Manihot esculenta
Manes.10G045300 Manihot esculenta
Mapoly0123s0003 Marchantia polymorpha
MBI02_g15888_MAGBIO Magnolia biondii
MBI02_g36733_MAGBIO Magnolia biondii
MBI02_g36734_MAGBIO Magnolia biondii
MBI06_g24642_MAGBIO Magnolia biondii
MBI10_g18715_MAGBIO Magnolia biondii
MD01G1108800 Malus domestica
MD03G1264100 Malus domestica
MD05G1261500 Malus domestica
MD07G1175100 Malus domestica
MD11G1284700 Malus domestica
MD16G1222700 Malus domestica
Medtr0368s0010 Medicago truncatula
Medtr1g072190 Medicago truncatula
Medtr1g095165 Medicago truncatula
Medtr2g029510 Medicago truncatula
Medtr7g094940 Medicago truncatula
MELO3C007037.2 Cucumis melo
MELO3C012433.2 Cucumis melo
MELO3C015831.2 Cucumis melo
MELO3C019791.2 Cucumis melo
Migut.D00300 Erythranthe guttata
Migut.F01775 Erythranthe guttata
Migut.F02002 Erythranthe guttata
Migut.J01889 Erythranthe guttata
Migut.N02051 Erythranthe guttata
MSTRG.17444 Avicennia marina
MSTRG.19935 Avicennia marina
MSTRG.21557 Avicennia marina
MSTRG.27457 Avicennia marina
MSTRG.365 Avicennia marina
MSTRG.9183 Avicennia marina
Nitab4.5_0000458g0080 Nicotiana tabacum
Nitab4.5_0000476g0150 Nicotiana tabacum
Nitab4.5_0000759g0150 Nicotiana tabacum
Nitab4.5_0001029g0020 Nicotiana tabacum
Nitab4.5_0001228g0010 Nicotiana tabacum
Nitab4.5_0002445g0010 Nicotiana tabacum
Nitab4.5_0003144g0010 Nicotiana tabacum
Nitab4.5_0007223g0040 Nicotiana tabacum
Nitab4.5_0008228g0030 Nicotiana tabacum
Nitab4.5_0009953g0010 Nicotiana tabacum
Nitab4.5_0013024g0010 Nicotiana tabacum
Nitab4.5_0013086g0010 Nicotiana tabacum
Nn1g02252 Nelumbo nucifera
Nn1g05989 Nelumbo nucifera
Nn2g10775 Nelumbo nucifera
Nn2g13089 Nelumbo nucifera
Nn7g37695 Nelumbo nucifera
Nn8g39621 Nelumbo nucifera
Oeu009200.1 Olea europaea
Oeu012402.1 Olea europaea
Oeu027480.1 Olea europaea
Oeu033850.2 Olea europaea
Oeu037563.1 Olea europaea
Oeu052764.1 Olea europaea
Oeu060000.1 Olea europaea
Os03g0254400 Oryza sativa ssp. japonica
Os03g0416400 Oryza sativa ssp. japonica
Os03g0640000 Oryza sativa ssp. japonica
Os03g0784100 Oryza sativa ssp. japonica
Os06g0677000 Oryza sativa ssp. japonica
Os07g0144500 Oryza sativa ssp. japonica
Os12g0611300 Oryza sativa ssp. japonica
Peaxi162Scf00003g04840 Petunia axillaris
Peaxi162Scf00156g01213 Petunia axillaris
Peaxi162Scf00249g00619 Petunia axillaris
Peaxi162Scf00641g00065 Petunia axillaris
Peaxi162Scf00747g00120 Petunia axillaris
Peaxi162Scf00783g00224 Petunia axillaris
PGR044G2676 Punica granatum
PGR083G1565 Punica granatum
PGR119G1337 Punica granatum
PGR142G1771 Punica granatum
PGSC0003DMG400008357 Solanum tuberosum
PGSC0003DMG400012878 Solanum tuberosum
PGSC0003DMG400020128 Solanum tuberosum
PGSC0003DMG400023463 Solanum tuberosum
PGSC0003DMG400023699 Solanum tuberosum
Phvul.001G151400 Phaseolus vulgaris
Phvul.006G130400 Phaseolus vulgaris
Phvul.007G094300 Phaseolus vulgaris
Phvul.007G172300 Phaseolus vulgaris
Potri.002G052600 Populus trichocarpa
Potri.005G210100 Populus trichocarpa
Potri.008G040500 Populus trichocarpa
Potri.010G221700 Populus trichocarpa
Potri.012G123900 Populus trichocarpa
Potri.015G122700 Populus trichocarpa
Pp3c5_9670 Physcomitrium patens
Pp3c6_20800 Physcomitrium patens
Prupe.2G214300 Prunus persica
Prupe.4G104000 Prunus persica
Prupe.8G240600 Prunus persica
Psat1g168640 Pisum sativum
Psat3g064440 Pisum sativum
Psat6g060240 Pisum sativum
Psat6g184320 Pisum sativum
PSO339G1334 Papaver somniferum
PSO339G3133 Papaver somniferum
PSO384G1296 Papaver somniferum
PSO384G2905 Papaver somniferum
PSO675G0109 Papaver somniferum
PSO675G1985 Papaver somniferum
PSO675G3186 Papaver somniferum
PSO675G3187 Papaver somniferum
PSO675G7525 Papaver somniferum
PSO832G2660 Papaver somniferum
QL05p065271 Quercus lobata
QL08p056049 Quercus lobata
QL12p021694 Quercus lobata
RcHm_v2.0_Chr1g0363481 Rosa chinensis
RcHm_v2.0_Chr5g0018711 Rosa chinensis
RcHm_v2.0_Chr6g0290991 Rosa chinensis
Rhsim09G0152300 Rhododendron simsii
Rhsim13G0025300 Rhododendron simsii
Sabra02G0042700 Salix brachista
Sabra05G0160200 Salix brachista
Sabra08G0027600 Salix brachista
Sabra10G0171600 Salix brachista
Sabra12G0094100 Salix brachista
Sabra15G0138700 Salix brachista
SalBow3G0542 Salvia bowleyana
SalBow4G0961 Salvia bowleyana
SalBow4G3203 Salvia bowleyana
SalBow6G0154 Salvia bowleyana
SalBow6G1081 Salvia bowleyana
Sc09g0006450 Simmondsia chinensis
Sc24g0002760 Simmondsia chinensis
Sed0005393 Sechium edule
Sed0005425 Sechium edule
Sed0011782 Sechium edule
Sed0012442 Sechium edule
Sed0021392 Sechium edule
Sed0021736 Sechium edule
Sed0026307 Sechium edule
SEGI_20810 Sequoiadendron giganteum
SEGI_39545 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00482 Striga asiatica
SGA_v2.0_scaffold341G49366 Striga asiatica
SGA_v2.0_scaffold62G21423 Striga asiatica
SGA_v2.0_scaffold69G23019 Striga asiatica
SGA_v2.0_scaffold81G26008 Striga asiatica
SMO334G0008 Selaginella moellendorffii
SMO367G0092 Selaginella moellendorffii
Solyc05g056030.3 Solanum lycopersicum
Solyc09g065240.3 Solanum lycopersicum
Solyc10g078530.2 Solanum lycopersicum
Solyc10g080690.2 Solanum lycopersicum
Sopen05g034440 Solanum pennellii
Sopen09g026960 Solanum pennellii
Sopen10g029180 Solanum pennellii
Sopen10g031230 Solanum pennellii
Sp4g21550 Schrenkiella parvula
Sp5g00330 Schrenkiella parvula
Sp5g07470 Schrenkiella parvula
Sp7g27610 Schrenkiella parvula
SpUn0018_0120 Schrenkiella parvula
TAR015G0001 Trochodendron aralioides
TAR362G0525 Trochodendron aralioides
TAR623G1514 Trochodendron aralioides
TAR627G0763 Trochodendron aralioides
TAR629G0106 Trochodendron aralioides
TAR633G1273 Trochodendron aralioides
TAR633G2698 Trochodendron aralioides
TAR636G0601 Trochodendron aralioides
TAR636G1576 Trochodendron aralioides
TAR636G3665 Trochodendron aralioides
THA.LOC104802232 Tarenaya hassleriana
THA.LOC104806083 Tarenaya hassleriana
THA.LOC104809879 Tarenaya hassleriana
THA.LOC104823046 Tarenaya hassleriana
Thecc.01G278700 Theobroma cacao
Thecc.06G015700 Theobroma cacao
Thecc.10G072800 Theobroma cacao
Thhalv10006027m.g Eutrema salsugineum
Thhalv10010298m.g Eutrema salsugineum
Thhalv10016579m.g Eutrema salsugineum
Thhalv10027483m.g Eutrema salsugineum
TPR.G1906 Trifolium pratense
TPR.G40549 Trifolium pratense
TPR.G9926 Trifolium pratense
TWI14G0447 Tripterygium wilfordii
TWI38G1451 Tripterygium wilfordii
TWI59G1017 Tripterygium wilfordii
TWI63G0982 Tripterygium wilfordii
unitig_0.g114 Utricularia gibba
unitig_21.g20295 Utricularia gibba
unitig_37.g12300 Utricularia gibba
unitig_37.g12301 Utricularia gibba
unitig_37.g12302 Utricularia gibba
unitig_46.g18589 Utricularia gibba
unitig_46.g18590 Utricularia gibba
unitig_60.g25701 Utricularia gibba
unitig_744.g24483 Utricularia gibba
unitig_744.g24624 Utricularia gibba
unitig_744.g24625 Utricularia gibba
unitig_899.g14439 Utricularia gibba
vmacro02575 Vaccinium macrocarpon
vmacro04875 Vaccinium macrocarpon
vmacro13567 Vaccinium macrocarpon
vmacro14919 Vaccinium macrocarpon
VMungo0540G1161 Vigna mungo
VMungo0720G0864 Vigna mungo
VMungo0720G2994 Vigna mungo
VMungo1383G3165 Vigna mungo
Zm00001eb011000 Zea mays
Zm00001eb031610 Zea mays
Zm00001eb050700 Zea mays
Zm00001eb050710 Zea mays
Zm00001eb059800 Zea mays
Zm00001eb135980 Zea mays
Zm00001eb218760 Zea mays
Zm00001eb224740 Zea mays
Zm00001eb299880 Zea mays
Zm00001eb387900 Zea mays

User provided reference genes

Program Settings