Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17960 Brassica napus
A03p14080 Brassica napus
A04p09890 Brassica napus
A06p14340 Brassica napus
A08p09920 Brassica napus
A09p04520 Brassica napus
A09p13050 Brassica napus
Aa31LG11G7540 Aethionema arabicum
Aa31LG5G12220 Aethionema arabicum
Aa31sc124G30 Aethionema arabicum
Aa31sc337G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2881 Anthoceros agrestis
Actinidia00110 Actinidia chinensis
Actinidia09767 Actinidia chinensis
Actinidia10758 Actinidia chinensis
Actinidia10759 Actinidia chinensis
Actinidia23359 Actinidia chinensis
Actinidia23796 Actinidia chinensis
Actinidia23797 Actinidia chinensis
Actinidia30015 Actinidia chinensis
Actinidia30016 Actinidia chinensis
Actinidia34542 Actinidia chinensis
Actinidia35379 Actinidia chinensis
Actinidia35380 Actinidia chinensis
Ah.01g001760 Amaranthus hybridus
Ah.02g111150 Amaranthus hybridus
Ah.02g111510 Amaranthus hybridus
Ah.04g166350 Amaranthus hybridus
AL3G42360 Arabidopsis lyrata
AL7G26140 Arabidopsis lyrata
AL7G44560 Arabidopsis lyrata
AL8G21300 Arabidopsis lyrata
AL8G30950 Arabidopsis lyrata
Aqoxy1G02536 Aquilegia oxysepala
Aqoxy1G02840 Aquilegia oxysepala
Aqoxy1G04065 Aquilegia oxysepala
Aqoxy242s001 Aquilegia oxysepala
Aqoxy3G01622 Aquilegia oxysepala
Aqoxy4G01110 Aquilegia oxysepala
Aqoxy6G02055 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0V2EN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1TW5Y7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCE2Q1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2XTER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIK8JJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZPNK8K Arachis hypogaea
AT2G04750 Arabidopsis thaliana
AT4G26700 Arabidopsis thaliana
AT5G35700 Arabidopsis thaliana
AT5G48460 Arabidopsis thaliana
AT5G55400 Arabidopsis thaliana
ATR0686G225 Amborella trichopoda
ATR0712G007 Amborella trichopoda
Atru.chr2.3582 Acer truncatum
Atru.chr4.396 Acer truncatum
Atru.chr6.3320 Acer truncatum
Atru.chr6.3324 Acer truncatum
Atru.chr6.3325 Acer truncatum
Atru.chr6.3544 Acer truncatum
AUR62008120 Chenopodium quinoa
AUR62015094 Chenopodium quinoa
AUR62015916 Chenopodium quinoa
AUR62017554 Chenopodium quinoa
AUR62024754 Chenopodium quinoa
AUR62028698 Chenopodium quinoa
BcaB01g03838 Brassica carinata
BcaB01g04344 Brassica carinata
BcaB04g19578 Brassica carinata
BcaB05g21497 Brassica carinata
BcaB06g26973 Brassica carinata
BcaC01g06360 Brassica carinata
BcaC02g09489 Brassica carinata
BcaC04g22773 Brassica carinata
BcaC04g23775 Brassica carinata
BcaC07g37651 Brassica carinata
BcaC09g52256 Brassica carinata
BolC1t02207H Brassica oleracea
BolC3t14071H Brassica oleracea
BolC4t25915H Brassica oleracea
BolC8t48024H Brassica oleracea
BolC9t53410H Brassica oleracea
BolC9t54451H Brassica oleracea
BraA01t01751Z Brassica rapa
BraA03t10708Z Brassica rapa
BraA04t16651Z Brassica rapa
BraA08t32986Z Brassica rapa
BraA09t36087Z Brassica rapa
BraA09t36949Z Brassica rapa
C01p22780 Brassica napus
C03p16520 Brassica napus
C04p43370 Brassica napus
C09p04830 Brassica napus
C09p15460 Brassica napus
C09p44670 Brassica napus
CAN.G283.3 Capsicum annuum
CAN.G290.18 Capsicum annuum
CAN.G337.46 Capsicum annuum
CAN.G874.28 Capsicum annuum
CANSAT01G1496 Cannabis sativa
CANSAT64G0561 Cannabis sativa
CARHR102710 Cardamine hirsuta
CARHR102720 Cardamine hirsuta
CARHR102730 Cardamine hirsuta
CARHR183620 Cardamine hirsuta
CARHR216980 Cardamine hirsuta
CARHR234310 Cardamine hirsuta
CARHR268740 Cardamine hirsuta
Carub.0003s2636 Capsella rubella
Carub.0007s1415 Capsella rubella
Carub.0007s3144 Capsella rubella
Carub.0008s0804 Capsella rubella
Carub.0008s1574 Capsella rubella
Ca_06355_v3 Cicer arietinum L.
Ca_06476_v3 Cicer arietinum L.
Ca_07478_v3 Cicer arietinum L.
Ca_23186_v3 Cicer arietinum L.
Ca_30804_v3 Cicer arietinum L.
CBR_g31249 Chara braunii
Cc00_g13250 Coffea canephora
Cc01_g16120 Coffea canephora
Cc05_g14480 Coffea canephora
CDE05G0119 Ceratophyllum demersum
CDE05G0796 Ceratophyllum demersum
CDE05G1279 Ceratophyllum demersum
Cfa014279 Carpinus fangiana
Cfa020259 Carpinus fangiana
Cfa025438 Carpinus fangiana
Ciclev10007569m.g Citrus clementina
Ciclev10014495m.g Citrus clementina
Ciclev10014518m.g Citrus clementina
CiPaw.04G194000 Carya illinoinensis
CiPaw.11G196500 Carya illinoinensis
CiPaw.14G043700 Carya illinoinensis
ClCG02G002490 Citrullus lanatus
ClCG09G008200 Citrullus lanatus
ClCG10G004860 Citrullus lanatus
COL.COLO4_08762 Corchorus olitorius
COL.COLO4_09752 Corchorus olitorius
COL.COLO4_26570 Corchorus olitorius
COL.COLO4_35985 Corchorus olitorius
Cpa.g.sc12.224 Carica papaya
Cpa.g.sc8.71 Carica papaya
Cpa.g.sc987.2 Carica papaya
Cre16.g679650 Chlamydomonas reinhardtii
CsaV3_3G004520 Cucumis sativus L.
CsaV3_5G014600 Cucumis sativus L.
CsaV3_7G002890 Cucumis sativus L.
CsaV3_7G026850 Cucumis sativus L.
CSS0002372 Camellia sinensis var. sinensis
CSS0015251 Camellia sinensis var. sinensis
CSS0020387 Camellia sinensis var. sinensis
CSS0024789 Camellia sinensis var. sinensis
CSS0048004 Camellia sinensis var. sinensis
DCAR_009886 Daucus carota
DCAR_012910 Daucus carota
DCAR_013203 Daucus carota
DCAR_018620 Daucus carota
DCAR_019720 Daucus carota
DCAR_021118 Daucus carota
DCAR_022597 Daucus carota
DCAR_024387 Daucus carota
Dinv07832 Davidia involucrata
Dinv10441 Davidia involucrata
Dinv28810 Davidia involucrata
Dinv40817 Davidia involucrata
Duzib133G0568 Durio zibethinus
Duzib138G1470 Durio zibethinus
Duzib138G1660 Durio zibethinus
Duzib170G0241 Durio zibethinus
Duzib211G0465 Durio zibethinus
Duzib213G0685 Durio zibethinus
Duzib268G0281 Durio zibethinus
ECA234G2096 Erigeron canadensis
ECA236G0045 Erigeron canadensis
ECA236G0241 Erigeron canadensis
ECA240G3094 Erigeron canadensis
ECA240G3778 Erigeron canadensis
ECA246G4111 Erigeron canadensis
EL10Ac2g02961 Beta vulgaris
EL10Ac3g05657 Beta vulgaris
EL10Ac4g07645 Beta vulgaris
EL10Ac5g10624 Beta vulgaris
EL10Ac5g10642 Beta vulgaris
Eucgr.F00638 Eucalyptus grandis
Eucgr.K00712 Eucalyptus grandis
Eucgr.K02088 Eucalyptus grandis
FAN02G3642 Fragaria x ananassa
FAN05G2095 Fragaria x ananassa
FAN09G2328 Fragaria x ananassa
FAN11G1386 Fragaria x ananassa
FAN14G4366 Fragaria x ananassa
FAN14G4437 Fragaria x ananassa
FAN15G0496 Fragaria x ananassa
FAN16G0326 Fragaria x ananassa
FAN21G2835 Fragaria x ananassa
FAN24G3363 Fragaria x ananassa
FAN25G2141 Fragaria x ananassa
FAN27G2033 Fragaria x ananassa
FAN27G2721 Fragaria x ananassa
FvH4_2g17780 Fragaria vesca
FvH4_3g23730 Fragaria vesca
FvH4_6g41540 Fragaria vesca
Glyma.02G296300 Glycine max
Glyma.02G307900 Glycine max
Glyma.03G090000 Glycine max
Glyma.08G305500 Glycine max
Glyma.08G344100 Glycine max
Glyma.14G005200 Glycine max
Glyma.14G017400 Glycine max
Glyma.16G083100 Glycine max
Glyma.18G152200 Glycine max
Glyma.18G184100 Glycine max
Gohir.A01G085400 Gossypium hirsutum
Gohir.A07G086200 Gossypium hirsutum
Gohir.A07G159100 Gossypium hirsutum
Gohir.A07G189200 Gossypium hirsutum
Gohir.A11G142600 Gossypium hirsutum
Gohir.A11G277800 Gossypium hirsutum
Gohir.D01G071800 Gossypium hirsutum
Gohir.D07G091300 Gossypium hirsutum
Gohir.D07G167300 Gossypium hirsutum
Gohir.D07G195520 Gossypium hirsutum
Gohir.D11G148900 Gossypium hirsutum
Gohir.D11G287900 Gossypium hirsutum
Gorai.001G097800 Gossypium raimondii
Gorai.001G218900 Gossypium raimondii
Gorai.002G094600 Gossypium raimondii
Gorai.007G159700 Gossypium raimondii
Gorai.007G311700 Gossypium raimondii
Gorai.N003200 Gossypium raimondii
GSVIVG01003818001 Vitis vinifera
GSVIVG01006225001 Vitis vinifera
GSVIVG01030417001 Vitis vinifera
GSVIVG01037750001 Vitis vinifera
HanXRQChr02g0042011 Helianthus annuus
HanXRQChr03g0076921 Helianthus annuus
HanXRQChr09g0269611 Helianthus annuus
HanXRQChr10g0306341 Helianthus annuus
HanXRQChr12g0373901 Helianthus annuus
HanXRQChr16g0507741 Helianthus annuus
HanXRQChr16g0523381 Helianthus annuus
HanXRQChr16g0526941 Helianthus annuus
HanXRQChr17g0546351 Helianthus annuus
Haze_03499 Corylus avellana
Haze_09761 Corylus avellana
Haze_12724 Corylus avellana
Haze_26355 Corylus avellana
Hma1.2p1_0036F.1_g022990 Hydrangea macrophylla
HPP92_003011 Vanilla planifolia
HPP92_006951 Vanilla planifolia
HPP92_006957 Vanilla planifolia
HPP92_007480 Vanilla planifolia
HPP92_027545 Vanilla planifolia
Hund02796 Selenicereus undatus
Hund08353 Selenicereus undatus
Hund08361 Selenicereus undatus
Hund09469 Selenicereus undatus
Hund23175 Selenicereus undatus
Lalb_Chr04g0247151 Lupinus albus
Lalb_Chr10g0107211 Lupinus albus
Lalb_Chr17g0348731 Lupinus albus
Lalb_Chr17g0349261 Lupinus albus
Lalb_Chr19g0126131 Lupinus albus
Lj1A101G43 Lonicera japonica
Lj1A882T68 Lonicera japonica
Lj1g0013759 Lotus japonicus
Lj2A1117G16 Lonicera japonica
Lj2A1117T19 Lonicera japonica
Lj3g0008493 Lotus japonicus
Lj8A132T60 Lonicera japonica
LjContig00081g0018909 Lotus japonicus
LjContig00272g0014747 Lotus japonicus
Lsat_1_v5_gn_5_124700 Lactuca sativa
Lsat_1_v5_gn_5_3241 Lactuca sativa
Lsat_1_v5_gn_7_113520 Lactuca sativa
Lsat_1_v5_gn_8_66921 Lactuca sativa
Lsat_1_v5_gn_8_98080 Lactuca sativa
Lsat_1_v5_gn_9_119101 Lactuca sativa
Lsat_1_v5_gn_9_90921 Lactuca sativa
Manes.03G134702 Manihot esculenta
Manes.03G134800 Manihot esculenta
Manes.12G054300 Manihot esculenta
Manes.12G060600 Manihot esculenta
Manes.13G054500 Manihot esculenta
Manes.15G064800 Manihot esculenta
Mapoly0002s0131 Marchantia polymorpha
MBI07_g35532_MAGBIO Magnolia biondii
MBI07_g47675_MAGBIO Magnolia biondii
MBI16_g31716_MAGBIO Magnolia biondii
MBI19_g06143_MAGBIO Magnolia biondii
MD03G1190800 Malus domestica
MD04G1101600 Malus domestica
MD05G1159000 Malus domestica
MD09G1119000 Malus domestica
MD10G1151800 Malus domestica
MD11G1207500 Malus domestica
MD17G1109900 Malus domestica
Medtr5g094160 Medicago truncatula
Medtr5g098130 Medicago truncatula
Medtr7g052820 Medicago truncatula
Medtr8g011460 Medicago truncatula
MELO3C010130.2 Cucumis melo
MELO3C012727.2 Cucumis melo
MELO3C014150.2 Cucumis melo
MELO3C018887.2 Cucumis melo
MELO3C029669.2 Cucumis melo
MELO3C032531.2 Cucumis melo
Migut.D00737 Erythranthe guttata
Migut.F01581 Erythranthe guttata
Migut.M00005 Erythranthe guttata
Migut.M01696 Erythranthe guttata
MSTRG.14937 Avicennia marina
MSTRG.18496 Avicennia marina
Nitab4.5_0000038g0140 Nicotiana tabacum
Nitab4.5_0000130g0200 Nicotiana tabacum
Nitab4.5_0001160g0090 Nicotiana tabacum
Nitab4.5_0001348g0050 Nicotiana tabacum
Nitab4.5_0003859g0020 Nicotiana tabacum
Nitab4.5_0005874g0050 Nicotiana tabacum
Nitab4.5_0008746g0010 Nicotiana tabacum
Nitab4.5_0013208g0010 Nicotiana tabacum
Nn171s44487 Nelumbo nucifera
Nn172s44492 Nelumbo nucifera
Nn1g03311 Nelumbo nucifera
Nn1g04217 Nelumbo nucifera
Nn1g04219 Nelumbo nucifera
Nn1g07386 Nelumbo nucifera
Nn1g07968 Nelumbo nucifera
Nn1g08002 Nelumbo nucifera
Nn1g08010 Nelumbo nucifera
Nn1g08011 Nelumbo nucifera
Nn1g08018 Nelumbo nucifera
Nn1g08025 Nelumbo nucifera
Nn1g08283 Nelumbo nucifera
Nn253s45904 Nelumbo nucifera
Nn333s46380 Nelumbo nucifera
Nn3g20202 Nelumbo nucifera
Nn5g27467 Nelumbo nucifera
Nn8g40581 Nelumbo nucifera
Nn8g40594 Nelumbo nucifera
Oeu003657.1 Olea europaea
Oeu005511.1 Olea europaea
Oeu005982.1 Olea europaea
Oeu029948.2 Olea europaea
Oeu034543.3 Olea europaea
Oeu047669.1 Olea europaea
Oeu057830.1 Olea europaea
Oeu057831.1 Olea europaea
Os01g0514600 Oryza sativa ssp. japonica
Os02g0588300 Oryza sativa ssp. japonica
Os02g0719100 Oryza sativa ssp. japonica
Peaxi162Scf00047g01925 Petunia axillaris
Peaxi162Scf00235g00842 Petunia axillaris
Peaxi162Scf00335g00076 Petunia axillaris
Peaxi162Scf01242g00015 Petunia axillaris
Peaxi162Scf01333g00113 Petunia axillaris
PGR044G1189 Punica granatum
PGR083G1338 Punica granatum
PGR142G1196 Punica granatum
PGSC0003DMG400006431 Solanum tuberosum
PGSC0003DMG400013902 Solanum tuberosum
PGSC0003DMG400013942 Solanum tuberosum
PGSC0003DMG400031339 Solanum tuberosum
PGSC0003DMG401020115 Solanum tuberosum
PGSC0003DMG402022197 Solanum tuberosum
Phvul.008G136800 Phaseolus vulgaris
Phvul.008G273500 Phaseolus vulgaris
Phvul.008G287800 Phaseolus vulgaris
Phvul.010G031500 Phaseolus vulgaris
Potri.001G360100 Populus trichocarpa
Potri.002G251600 Populus trichocarpa
Potri.011G086500 Populus trichocarpa
Potri.014G163100 Populus trichocarpa
Pp3c15_21790 Physcomitrium patens
Pp3c9_20460 Physcomitrium patens
PRCOL_00003542 Prasinoderma coloniale
Prupe.3G205200 Prunus persica
Prupe.4G227900 Prunus persica
Prupe.8G190200 Prunus persica
Psat2g003640 Pisum sativum
Psat2g010520 Pisum sativum
Psat3g038520 Pisum sativum
Psat3g150960 Pisum sativum
Psat4g206600 Pisum sativum
Psat5g208880 Pisum sativum
Psat7g119440 Pisum sativum
Psat7g152080 Pisum sativum
Psat7g152120 Pisum sativum
PSO017G1161 Papaver somniferum
PSO210G4379 Papaver somniferum
PSO302G0311 Papaver somniferum
PSO541G3472 Papaver somniferum
PSO675G1730 Papaver somniferum
PSO675G7091 Papaver somniferum
QL08p008328 Quercus lobata
QL08p029580 Quercus lobata
QL09p046418 Quercus lobata
RcHm_v2.0_Chr2g0157211 Rosa chinensis
RcHm_v2.0_Chr5g0041891 Rosa chinensis
RcHm_v2.0_Chr6g0282801 Rosa chinensis
Rhsim03G0072100 Rhododendron simsii
Rhsim04G0015900 Rhododendron simsii
Rhsim04G0045600 Rhododendron simsii
Rhsim04G0244500 Rhododendron simsii
Rhsim13G0052800 Rhododendron simsii
Sabra02G0191200 Salix brachista
Sabra11G0089700 Salix brachista
Sabra11G0092800 Salix brachista
Sabra14G0124500 Salix brachista
Sabra15G0069200 Salix brachista
Sabra15G0069400 Salix brachista
Sabra15G0072900 Salix brachista
Sabra15G0073000 Salix brachista
Sabra16G0237600 Salix brachista
Sabra17G0059000 Salix brachista
Sabra17G0059100 Salix brachista
Sabra17G0059200 Salix brachista
Sabra18G0055500 Salix brachista
SalBow3G0552 Salvia bowleyana
SalBow6G4306 Salvia bowleyana
SalBow8G5100 Salvia bowleyana
Sc05g0001750 Simmondsia chinensis
Sc18g0004230 Simmondsia chinensis
Sc20g0003850 Simmondsia chinensis
Sc21g0000990 Simmondsia chinensis
Sed0000162 Sechium edule
Sed0007167 Sechium edule
Sed0009502 Sechium edule
Sed0010512 Sechium edule
Sed0012166 Sechium edule
SEGI_01009 Sequoiadendron giganteum
SEGI_02562 Sequoiadendron giganteum
SEGI_26536 Sequoiadendron giganteum
SEGI_30127 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37533 Striga asiatica
SGA_v2.0_scaffold168G38512 Striga asiatica
SGA_v2.0_scaffold29G12074 Striga asiatica
SHI10105 Sapria himalayana
SMO169G0027 Selaginella moellendorffii
SMO271G0005 Selaginella moellendorffii
SMO271G0012 Selaginella moellendorffii
SMO271G0042 Selaginella moellendorffii
SMO271G0071 Selaginella moellendorffii
SMO271G0111 Selaginella moellendorffii
SMO308G0004 Selaginella moellendorffii
SMO308G0030 Selaginella moellendorffii
Solyc06g083070.3 Solanum lycopersicum
Solyc07g049600.4 Solanum lycopersicum
Solyc07g065080.4 Solanum lycopersicum
Solyc09g056170.3 Solanum lycopersicum
Solyc12g005920.2 Solanum lycopersicum
Sopen06g034460 Solanum pennellii
Sopen07g025000 Solanum pennellii
Sopen07g033290 Solanum pennellii
Sopen09g019470 Solanum pennellii
Sopen12g001870 Solanum pennellii
Sp2g18830 Schrenkiella parvula
Sp3g23380 Schrenkiella parvula
Sp6g17320 Schrenkiella parvula
Sp7g06540 Schrenkiella parvula
Sp7g24670 Schrenkiella parvula
TAR365G0756 Trochodendron aralioides
TAR627G0479 Trochodendron aralioides
TAR629G1148 Trochodendron aralioides
THA.LOC104802644 Tarenaya hassleriana
THA.LOC104808859 Tarenaya hassleriana
THA.LOC104809867 Tarenaya hassleriana
THA.LOC104817692 Tarenaya hassleriana
THA.LOC104818998 Tarenaya hassleriana
Thecc.01G186200 Theobroma cacao
Thecc.01G210900 Theobroma cacao
Thecc.07G025100 Theobroma cacao
Thhalv10003006m.g Eutrema salsugineum
Thhalv10003746m.g Eutrema salsugineum
Thhalv10003785m.g Eutrema salsugineum
Thhalv10012845m.g Eutrema salsugineum
Thhalv10024581m.g Eutrema salsugineum
TPR.G15059 Trifolium pratense
TPR.G26821 Trifolium pratense
TPR.G28989 Trifolium pratense
TPR.G30648 Trifolium pratense
TPR.G34609 Trifolium pratense
TPR.G40101 Trifolium pratense
TWI18G1048 Tripterygium wilfordii
TWI36G0180 Tripterygium wilfordii
TWI38G0881 Tripterygium wilfordii
TWI75G0067 Tripterygium wilfordii
TWI75G1139 Tripterygium wilfordii
unitig_37.g12599 Utricularia gibba
unitig_52.g16867 Utricularia gibba
unitig_747.g21648 Utricularia gibba
vmacro02817 Vaccinium macrocarpon
vmacro09382 Vaccinium macrocarpon
vmacro09680 Vaccinium macrocarpon
vmacro11576 Vaccinium macrocarpon
VMungo0331G1776 Vigna mungo
VMungo0647G0166 Vigna mungo
VMungo0647G0244 Vigna mungo
VMungo1383G2458 Vigna mungo
Zm00001eb132450 Zea mays
Zm00001eb189400 Zea mays
Zm00001eb245630 Zea mays
Zm00001eb252890 Zea mays

User provided reference genes

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