Gene: BraA01t01751Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA01t01751Z
- Transcript Identifier BraA01t01751Z
- Gene Type Coding gene
- Location A01 : 9268286-9278665 : positive
Gene Family Information
- ID HOM05D001236
- #Genes/#Species 503/99
- Phylogenetic origin
- ID ORTHO05D001090
- #Genes/#Species 492/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot A0A3P5Z8X8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051017 | IEA | GOA Database | actin filament bundle assembly | |
| GO:0051017 | IEA | InterPro | actin filament bundle assembly | |
| GO:0006265 | IEA | GOA Database | DNA topological change | |
| GO:0006265 | IEA | InterPro | DNA topological change | |
| GO:0051639 | ISO | PLAZA Integrative Orthology | actin filament network formation | AT4G26700 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT4G26700 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003779 | IEA | GOA Database | actin binding | |
| GO:0051015 | IEA | GOA Database | actin filament binding | |
| GO:0051015 | IEA | InterPro | actin filament binding | |
| GO:0003917 | IEA | GOA Database | DNA topoisomerase type I (single strand cut, ATP-independent) activity | |
| GO:0003917 | IEA | InterPro | DNA topoisomerase type I (single strand cut, ATP-independent) activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | GOA Database | chromosome | |
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001715 | Calponin homology domain |
| IPR013500 | DNA topoisomerase I, catalytic core, eukaryotic-type |
| IPR036872 | CH domain superfamily |
| IPR014727 | DNA topoisomerase I, catalytic core, alpha/beta subdomain |
| IPR025834 | Topoisomerase I C-terminal domain |
| IPR011010 | DNA breaking-rejoining enzyme, catalytic core |
| IPR013499 | DNA topoisomerase I, eukaryotic-type |
| IPR011992 | EF-hand domain pair |
| IPR039959 | Fimbrin/Plastin |
| Mapman id | Description |
|---|---|
| 20.2.2.4 | Cytoskeleton organisation.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor |