Gene: PGSC0003DMG402022197

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG402022197
  • Transcript Identifier PGSC0003DMT400057138
  • Gene Type Coding gene
  • Location ST4.03ch07 : 55208155-55213877 : negative

Gene Family Information

  • ID HOM05D001236
  • #Genes/#Species 503/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37432859
  • id PGSC0003DMG402022197.v4.03
  • uniprot M1C0H9

Descriptions

  • Description Fimbrin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030036
ISO
PLAZA Integrative Orthologyactin cytoskeleton organization AT5G35700
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT5G35700
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT4G26700
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT5G35700
GO:0051639
IBA
GOA Databaseactin filament network formation
GO:0051017
IBA
IEA
GOA Databaseactin filament bundle assembly
GO:0051017
IEA
InterProactin filament bundle assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0051015
IBA
IEA
GOA Databaseactin filament binding
GO:0051015
IEA
InterProactin filament binding
GO:0003779
IEA
GOA Databaseactin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032432
IBA
GOA Databaseactin filament bundle
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G55400
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G35700
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G04750
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005884
IBA
GOA Databaseactin filament

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001715 Calponin homology domain
IPR036872 CH domain superfamily
IPR039959 Fimbrin/Plastin
IPR011992 EF-hand domain pair
Mapman id Description
20.2.2.4 Cytoskeleton organisation.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor