Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22428 Vaccinium macrocarpon HOM05D005396 ORTHO05D006400 1.9e-124 449.1 217 100.0
vmacro04253 Vaccinium macrocarpon HOM05D005396 ORTHO05D006400 1.4e-90 336.7 218 79.4
Rhsim13G0228100 Rhododendron simsii HOM05D005396 ORTHO05D006400 4.4e-73 278.5 223 67.3
RhsimUnG0154800 Rhododendron simsii HOM05D005396 ORTHO05D006400 5.8e-73 278.1 223 67.3
Actinidia06861 Actinidia chinensis HOM05D005396 ORTHO05D006400 3.4e-65 252.3 216 61.6
Hma1.2p1_0143F.1_g064480 Hydrangea macrophylla HOM05D005396 ORTHO05D006400 4.6e-54 215.3 220 53.6
Prupe.6G153500 Prunus persica HOM05D005396 ORTHO05D006400 3.3e-52 209.1 216 54.6
TAR623G1186 Trochodendron aralioides HOM05D005396 ORTHO05D006400 9.6e-52 207.6 217 51.6
Cfa013848 Carpinus fangiana HOM05D005396 ORTHO05D006400 4.8e-51 205.3 219 51.6
Hund20984 Selenicereus undatus HOM05D005396 ORTHO05D006400 8.1e-51 204.5 222 50.9
RcHm_v2.0_Chr5g0056531 Rosa chinensis HOM05D005396 ORTHO05D006400 9.0e-50 201.1 217 49.3
CSS0010626 Camellia sinensis var. sinensis HOM05D005396 ORTHO05D006400 3.4e-49 199.1 164 62.2
QL93p0267_0015 Quercus lobata HOM05D005396 ORTHO05D006400 2.2e-48 196.4 216 50.5
Sc12g0000550 Simmondsia chinensis HOM05D005396 ORTHO05D006400 2.2e-48 196.4 219 50.2
Eucgr.J00626 Eucalyptus grandis HOM05D005396 ORTHO05D006400 2.9e-48 196.1 219 49.8
MD11G1180700 Malus domestica HOM05D005396 ORTHO05D006400 3.8e-48 195.7 217 51.2
CiPaw.07G159800 Carya illinoinensis HOM05D005396 ORTHO05D006400 4.9e-48 195.3 217 50.2
FAN11G0079 Fragaria x ananassa HOM05D005396 ORTHO05D006400 1.1e-47 194.1 214 48.6
FvH4_3g30540 Fragaria vesca HOM05D005396 ORTHO05D006400 1.4e-47 193.7 214 48.6
FAN16G3367 Fragaria x ananassa HOM05D005396 ORTHO05D006400 2.4e-47 193.0 214 48.6
HanXRQChr01g0021191 Helianthus annuus HOM05D005396 ORTHO05D006400 4.2e-47 192.2 207 49.3
BNapus_Darmor_BZH_scaffold_38p01120 Brassica napus HOM05D005396 ORTHO05D006400 7.1e-47 191.4 222 48.6
BraA02t05619Z Brassica rapa HOM05D005396 ORTHO05D006400 7.1e-47 191.4 222 48.6
PGR119G0906 Punica granatum HOM05D005396 ORTHO05D006400 1.6e-46 190.3 219 50.7
Atru.chr3.1131 Acer truncatum HOM05D005396 ORTHO05D006400 4.6e-46 188.7 223 48.0
Nn4g25074 Nelumbo nucifera HOM05D005396 ORTHO05D006400 4.6e-46 188.7 216 46.3
Nitab4.5_0001568g0090 Nicotiana tabacum HOM05D005396 ORTHO05D006400 4.6e-46 188.7 185 54.6
Sopen01g002210 Solanum pennellii HOM05D005396 ORTHO05D006400 6.0e-46 188.3 201 50.7
Solyc01g006210.4 Solanum lycopersicum HOM05D005396 ORTHO05D006400 7.9e-46 188.0 200 51.5
Atru.chr3.1122 Acer truncatum HOM05D005396 ORTHO05D006400 1.0e-45 187.6 223 47.5
Ciclev10017900m.g Citrus clementina HOM05D005396 ORTHO05D006400 1.0e-45 187.6 216 49.1
Peaxi162Scf00441g00618 Petunia axillaris HOM05D005396 ORTHO05D006400 1.0e-45 187.6 219 48.4
Aqoxy5G02307 Aquilegia oxysepala HOM05D005396 ORTHO05D006400 1.8e-45 186.8 218 46.8
Migut.N02270 Erythranthe guttata HOM05D005396 ORTHO05D006400 1.8e-45 186.8 216 50.0
CAN.G140.42 Capsicum annuum HOM05D005396 ORTHO05D006400 3.0e-45 186.0 200 50.5
AL6G32750 Arabidopsis lyrata HOM05D005396 ORTHO05D006400 3.9e-45 185.7 220 47.7
MSTRG.17554 Avicennia marina HOM05D005396 ORTHO05D006400 5.1e-45 185.3 220 47.7
BcaC03g13834 Brassica carinata HOM05D005396 ORTHO05D006400 5.1e-45 185.3 223 48.4
BolC2t07100H Brassica oleracea HOM05D005396 ORTHO05D006400 5.1e-45 185.3 223 48.4
PGSC0003DMG400032195 Solanum tuberosum HOM05D005396 ORTHO05D006400 5.1e-45 185.3 200 50.0
FAN25G1745 Fragaria x ananassa HOM05D005396 ORTHO05D006400 6.7e-45 184.9 208 47.6
GSVIVG01037451001 Vitis vinifera HOM05D005396 ORTHO05D006400 6.7e-45 184.9 219 47.5
Aa31LG1G13640 Aethionema arabicum HOM05D005396 ORTHO05D006400 8.7e-45 184.5 219 46.6
Sabra04G0132800 Salix brachista HOM05D005396 ORTHO05D006400 8.7e-45 184.5 220 48.6
Cc01_g01860 Coffea canephora HOM05D005396 ORTHO05D006400 1.1e-44 184.1 217 46.5
A10p18950 Brassica napus HOM05D005396 ORTHO05D006400 1.5e-44 183.7 218 46.3
BraA10t43972Z Brassica rapa HOM05D005396 ORTHO05D006400 1.5e-44 183.7 218 46.3
Carub.0006s1945 Capsella rubella HOM05D005396 ORTHO05D006400 1.5e-44 183.7 218 45.0
Thecc.09G337500 Theobroma cacao HOM05D005396 ORTHO05D006400 1.5e-44 183.7 225 46.2
Sp6g23380 Schrenkiella parvula HOM05D005396 ORTHO05D006400 1.9e-44 183.3 171 53.8
Cpa.g.sc103.64 Carica papaya HOM05D005396 ORTHO05D006400 2.5e-44 183.0 228 45.2
AUR62001615 Chenopodium quinoa HOM05D005396 ORTHO05D006400 2.5e-44 183.0 182 54.4
Oeu058539.1 Olea europaea HOM05D005396 ORTHO05D006400 2.5e-44 183.0 223 47.5
Thhalv10013965m.g Eutrema salsugineum HOM05D005396 ORTHO05D006400 5.6e-44 181.8 163 55.2
SalBow2G1218 Salvia bowleyana HOM05D005396 ORTHO05D006400 5.6e-44 181.8 220 45.5
ECA248G0004 Erigeron canadensis HOM05D005396 ORTHO05D006400 7.4e-44 181.4 186 50.5
Potri.004G195600 Populus trichocarpa HOM05D005396 ORTHO05D006400 7.4e-44 181.4 218 48.6
AT5G21140 Arabidopsis thaliana HOM05D005396 ORTHO05D006400 2.1e-43 179.9 216 46.8
BcaB08g36475 Brassica carinata HOM05D005396 ORTHO05D006400 2.8e-43 179.5 160 57.5
Nitab4.5_0005132g0020 Nicotiana tabacum HOM05D005396 ORTHO05D006400 3.6e-43 179.1 191 51.3
BcaB05g22770 Brassica carinata HOM05D005396 ORTHO05D006400 6.2e-43 178.3 218 45.9
Lsat_1_v5_gn_1_68341 Lactuca sativa HOM05D005396 ORTHO05D006400 6.2e-43 178.3 202 48.0
BcaC04g19522 Brassica carinata HOM05D005396 ORTHO05D006400 8.1e-43 177.9 218 45.4
BolC9t58356H Brassica oleracea HOM05D005396 ORTHO05D006400 1.1e-42 177.6 218 45.4
DCAR_024368 Daucus carota HOM05D005396 ORTHO05D006400 1.8e-42 176.8 171 52.6
Ah.15g099430 Amaranthus hybridus HOM05D005396 ORTHO05D006400 2.4e-42 176.4 187 51.3
arahy.Tifrunner.gnm1.ann1.MJD0TM Arachis hypogaea HOM05D005396 ORTHO05D006400 2.4e-42 176.4 267 42.3
Os12g0127100 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 2.4e-42 176.4 215 45.1
C09p54930 Brassica napus HOM05D005396 ORTHO05D006400 3.1e-42 176.0 159 56.6
Os11g0130300 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 4.0e-42 175.6 215 45.6
THA.LOC104799054 Tarenaya hassleriana HOM05D005396 ORTHO05D006400 5.3e-42 175.3 218 43.6
Gorai.003G140300 Gossypium raimondii HOM05D005396 ORTHO05D006400 9.0e-42 174.5 219 46.1
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 1.5e-41 173.7 220 46.8
CARHR191730 Cardamine hirsuta HOM05D005396 ORTHO05D006400 2.6e-41 172.9 160 54.4
Gohir.D03G133200 Gossypium hirsutum HOM05D005396 ORTHO05D006400 2.6e-41 172.9 219 45.7
PSO384G1109 Papaver somniferum HOM05D005396 ORTHO05D006400 9.9e-41 171.0 187 49.2
TWI31G0083 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 9.9e-41 171.0 224 45.1
Gohir.A03G035066 Gossypium hirsutum HOM05D005396 ORTHO05D006400 1.7e-40 170.2 219 45.2
ClCG02G024200 Citrullus lanatus HOM05D005396 ORTHO05D006400 2.9e-40 169.5 218 44.5
CANSAT54G2052 Cannabis sativa HOM05D005396 ORTHO05D006400 8.4e-40 167.9 165 52.7
Glyma.20G050900 Glycine max HOM05D005396 ORTHO05D006400 8.4e-40 167.9 251 41.8
Zm00001eb405340 Zea mays HOM05D005396 ORTHO05D006400 1.4e-39 167.2 187 46.5
Manes.04G053800 Manihot esculenta HOM05D005396 ORTHO05D006400 1.9e-39 166.8 218 44.0
Lalb_Chr19g0127081 Lupinus albus HOM05D005396 ORTHO05D006400 2.4e-39 166.4 193 45.6
EL10Ac1g01677 Beta vulgaris HOM05D005396 ORTHO05D006400 4.2e-39 165.6 191 48.7
TPR.G28402 Trifolium pratense HOM05D005396 ORTHO05D006400 4.2e-39 165.6 190 45.8
TWI79G1618 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 7.1e-39 164.9 224 43.8
Dinv09746 Davidia involucrata HOM05D005396 ORTHO05D006400 1.6e-38 163.7 130 62.3
Medtr3g078850 Medicago truncatula HOM05D005396 ORTHO05D006400 1.6e-38 163.7 182 47.3
Haze_22522 Corylus avellana HOM05D005396 ORTHO05D006400 3.5e-38 162.5 215 46.0
MELO3C014703.2 Cucumis melo HOM05D005396 ORTHO05D006400 3.5e-38 162.5 218 42.2
Duzib170G1145 Durio zibethinus HOM05D005396 ORTHO05D006400 4.6e-38 162.2 181 48.1
SGA_v2.0_scaffold3G01566 Striga asiatica HOM05D005396 ORTHO05D006400 6.0e-38 161.8 221 43.0
Ca_16226_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 7.9e-38 161.4 166 48.8
Ca_30133_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 7.9e-38 161.4 166 48.8
Sed0007754 Sechium edule HOM05D005396 ORTHO05D006400 1.8e-37 160.2 215 40.9
ATR0307G059 Amborella trichopoda HOM05D005396 ORTHO05D006400 2.3e-37 159.8 218 42.2
HPP92_018982 Vanilla planifolia HOM05D005396 ORTHO05D006400 3.9e-37 159.1 205 42.9
Lj6g0008952 Lotus japonicus HOM05D005396 ORTHO05D006400 6.7e-37 158.3 164 50.0
EL10Ac7g16212 Beta vulgaris HOM05D005396 ORTHO05D006400 1.5e-36 157.1 192 46.9
MBI13_g02393_MAGBIO Magnolia biondii HOM05D005396 ORTHO05D006400 1.5e-36 157.1 152 50.7
Phvul.L001837 Phaseolus vulgaris HOM05D005396 ORTHO05D006400 1.5e-36 157.1 162 49.4
VMungo0540G2152 Vigna mungo HOM05D005396 ORTHO05D006400 2.5e-36 156.4 162 49.4
RcHm_v2.0_Chr5g0056151 Rosa chinensis HOM05D005396 ORTHO05D006400 3.3e-36 156.0 162 50.0
CsaV3_4G017330 Cucumis sativus L. HOM05D005396 ORTHO05D006400 5.6e-36 155.2 181 45.3
EL10Ac7g16216 Beta vulgaris HOM05D005396 ORTHO05D006400 1.6e-35 153.7 128 58.6
PSO339G5547 Papaver somniferum HOM05D005396 ORTHO05D006400 5.3e-34 148.7 136 54.4
CDE02G2011 Ceratophyllum demersum HOM05D005396 ORTHO05D006400 3.4e-33 146.0 182 44.0
arahy.Tifrunner.gnm1.ann1.MU94NL Arachis hypogaea HOM05D005396 ORTHO05D006400 1.1e-31 141.0 260 36.9
Psat0s646g0040 Pisum sativum HOM05D005396 ORTHO05D006400 4.6e-30 135.6 222 37.4
AUR62020162 Chenopodium quinoa HOM05D005396 ORTHO05D006400 7.9e-30 134.8 163 48.5
Psat5g030400 Pisum sativum HOM05D001137 ORTHO05D006400 7.9e-30 134.8 107 57.0
RcHm_v2.0_Chr6g0256561 Rosa chinensis HOM05D005396 ORTHO05D006400 2.4e-26 123.2 88 58.0
Dinv36333 Davidia involucrata HOM05D005396 ORTHO05D006400 3.1e-26 122.9 112 58.9
Actinidia16276 Actinidia chinensis HOM05D005396 ORTHO05D006400 4.5e-25 119.0 105 57.1
Lj2A553G20 Lonicera japonica HOM05D005396 ORTHO05D006400 1.3e-24 117.5 114 53.5
Pp3c20_10070 Physcomitrium patens HOM05D005396 ORTHO05D006400 1.4e-23 114.0 204 34.3
BcaC03g13835 Brassica carinata HOM05D005396 ORTHO05D006400 2.1e-22 110.2 119 48.7
BolC2t07101H Brassica oleracea HOM05D005396 ORTHO05D006400 2.1e-22 110.2 119 48.7
FAN21G3982 Fragaria x ananassa HOM05D005396 ORTHO05D006400 4.6e-22 109.0 109 48.6
BraA02t05620Z Brassica rapa HOM05D005396 ORTHO05D006400 3.0e-21 106.3 120 48.3
EL10Ac7g16214 Beta vulgaris HOM05D005396 ORTHO05D006400 3.3e-20 102.8 184 37.5
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 5.7e-20 102.1 118 46.6
BNapus_Darmor_BZH_scaffold_38p01110 Brassica napus HOM05D005396 ORTHO05D006400 9.7e-20 101.3 120 46.7
AagrBONN_evm.TU.Sc2ySwM_368.35 Anthoceros agrestis HOM05D005396 ORTHO05D006400 3.7e-19 99.4 92 44.6
unitig_60.g25792 Utricularia gibba HOM05D005396 ORTHO05D006400 1.8e-18 97.1 128 44.5
SMO239G0090 Selaginella moellendorffii HOM05D005396 ORTHO05D006400 1.2e-17 94.4 128 39.8
SHI25366 Sapria himalayana HOM05D005396 ORTHO05D000023 3.4e-17 92.8 134 37.3
EL10Ac7g16205 Beta vulgaris HOM05D005396 ORTHO05D006400 1.4e-15 87.4 61 65.6
CBR_g4478 Chara braunii HOM05D005396 ORTHO05D000048 9.4e-15 84.7 190 27.9
Zm00001eb199750 Zea mays HOM05D005396 ORTHO05D006400 1.2e-14 84.3 104 49.0
EL10Ac7g16203 Beta vulgaris HOM05D005396 ORTHO05D006400 7.9e-14 81.6 110 45.5
EL10Ac7g16209 Beta vulgaris HOM05D005396 ORTHO05D006400 4.8e-11 72.4 146 36.3
HanXRQChr08g0223711 Helianthus annuus HOM05D005396 ORTHO05D006400 2.9e-08 63.2 43 55.8


User provided reference genes

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