Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21796 Vaccinium macrocarpon HOM05D001537 ORTHO05D002595 2.0e-132 475.7 231 100.0
Rhsim06G0005400 Rhododendron simsii HOM05D001537 ORTHO05D002595 3.3e-111 405.2 230 84.3
CSS0018686 Camellia sinensis var. sinensis HOM05D001537 ORTHO05D002595 9.5e-82 307.4 200 71.5
Dinv31961 Davidia involucrata HOM05D001537 ORTHO05D002595 9.5e-74 280.8 217 63.6
Actinidia17058 Actinidia chinensis HOM05D001537 ORTHO05D002595 8.0e-73 277.7 196 69.9
Hma1.2p1_0612F.1_g188850 Hydrangea macrophylla HOM05D001537 ORTHO05D002595 3.1e-64 249.2 215 57.2
Prupe.5G009400 Prunus persica HOM05D001537 ORTHO05D002595 8.9e-64 247.7 219 55.7
Atru.chr13.115 Acer truncatum HOM05D001537 ORTHO05D002595 7.0e-61 238.0 215 54.4
Ciclev10000045m.g Citrus clementina HOM05D001537 ORTHO05D002595 5.6e-58 228.4 211 54.5
QL02p014921 Quercus lobata HOM05D001537 ORTHO05D002595 7.3e-58 228.0 221 50.2
DCAR_022967 Daucus carota HOM05D001537 ORTHO05D002595 6.8e-56 221.5 203 55.2
Nitab4.5_0004356g0020 Nicotiana tabacum HOM05D001537 ORTHO05D002595 2.0e-55 219.9 203 53.2
Sabra02G0006500 Salix brachista HOM05D001537 ORTHO05D002595 2.6e-55 219.5 215 51.2
MD16G1283500 Malus domestica HOM05D001537 ORTHO05D002595 3.4e-55 219.2 220 50.5
Potri.002G008700 Populus trichocarpa HOM05D001537 ORTHO05D002595 7.5e-55 218.0 214 51.4
Thecc.08G061900 Theobroma cacao HOM05D001537 ORTHO05D002595 4.9e-54 215.3 228 46.9
GSVIVG01013389001 Vitis vinifera HOM05D001537 ORTHO05D002595 4.9e-54 215.3 198 54.5
THA.LOC104811474 Tarenaya hassleriana HOM05D001537 ORTHO05D002595 8.3e-54 214.5 215 49.8
Haze_22823 Corylus avellana HOM05D001537 ORTHO05D002595 2.4e-53 213.0 247 46.2
Cc00_g25330 Coffea canephora HOM05D001537 ORTHO05D002595 7.1e-53 211.5 210 52.4
RcHm_v2.0_Chr7g0215861 Rosa chinensis HOM05D001537 ORTHO05D002595 7.1e-53 211.5 258 45.3
Sopen10g030160 Solanum pennellii HOM05D001537 ORTHO05D002595 9.2e-53 211.1 223 49.8
MBI05_g14353_MAGBIO Magnolia biondii HOM05D001537 ORTHO05D002595 3.5e-52 209.1 216 54.2
Nn6g31690 Nelumbo nucifera HOM05D001537 ORTHO05D002595 7.8e-52 208.0 205 50.2
Migut.O00316 Erythranthe guttata HOM05D001537 ORTHO05D002595 2.3e-51 206.5 215 48.8
Manes.18G003801 Manihot esculenta HOM05D001537 ORTHO05D002595 1.9e-50 203.4 197 50.8
TWI56G1355 Tripterygium wilfordii HOM05D001537 ORTHO05D002595 1.9e-50 203.4 215 49.8
AT1G20720 Arabidopsis thaliana HOM05D001537 ORTHO05D002595 5.6e-50 201.8 198 48.5
Sc15g0004240 Simmondsia chinensis HOM05D001537 ORTHO05D002595 5.6e-50 201.8 211 46.9
SGA_v2.0_scaffold235G43685 Striga asiatica HOM05D001537 ORTHO05D002595 9.5e-50 201.1 188 51.6
AL1G33710 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 2.1e-49 199.9 198 48.5
FAN08G0357 Fragaria x ananassa HOM05D001537 ORTHO05D002595 2.8e-49 199.5 206 50.5
Glyma.14G223700 Glycine max HOM05D001537 ORTHO05D002595 4.7e-49 198.7 188 51.1
FAN13G0321 Fragaria x ananassa HOM05D001537 ORTHO05D002595 8.1e-49 198.0 206 50.0
ECA238G0307 Erigeron canadensis HOM05D001537 ORTHO05D002595 5.2e-48 195.3 215 42.8
PSO210G4823 Papaver somniferum HOM05D001537 ORTHO05D002595 6.8e-48 194.9 245 43.7
AUR62042903 Chenopodium quinoa HOM05D001537 ORTHO05D002595 1.2e-47 194.1 197 46.7
Gohir.D05G181700 Gossypium hirsutum HOM05D001537 ORTHO05D002595 2.0e-47 193.4 212 47.2
HanXRQChr06g0185181 Helianthus annuus HOM05D001537 ORTHO05D002595 2.0e-47 193.4 190 46.8
BolC5t30633H Brassica oleracea HOM05D001537 ORTHO05D002595 2.6e-47 193.0 198 47.0
Lj4A808G42 Lonicera japonica HOM05D001537 ORTHO05D002595 2.6e-47 193.0 148 62.8
Carub.0001s2019 Capsella rubella HOM05D001537 ORTHO05D002595 3.4e-47 192.6 192 48.4
CARHR021170 Cardamine hirsuta HOM05D001537 ORTHO05D002595 3.4e-47 192.6 197 46.7
Gorai.009G186700 Gossypium raimondii HOM05D001537 ORTHO05D002595 3.4e-47 192.6 212 46.7
Lj5g0001846 Lotus japonicus HOM05D001537 ORTHO05D002595 3.4e-47 192.6 199 46.7
Phvul.001G000600 Phaseolus vulgaris HOM05D001537 ORTHO05D002595 3.4e-47 192.6 209 46.4
Aqoxy5G01007 Aquilegia oxysepala HOM05D001537 ORTHO05D002595 4.4e-47 192.2 230 45.2
AUR62035135 Chenopodium quinoa HOM05D001537 ORTHO05D002595 4.4e-47 192.2 195 48.2
EL10Ac1g01914 Beta vulgaris HOM05D001537 ORTHO05D002595 1.3e-46 190.7 212 45.3
Gohir.A05G178300 Gossypium hirsutum HOM05D001537 ORTHO05D002595 1.3e-46 190.7 212 46.2
MSTRG.986 Avicennia marina HOM05D001537 ORTHO05D002595 4.9e-46 188.7 210 47.6
Hund01784 Selenicereus undatus HOM05D001537 ORTHO05D002595 1.4e-45 187.2 215 42.3
BraA06t24777Z Brassica rapa HOM05D001537 ORTHO05D002595 1.9e-45 186.8 193 46.6
Duzib093G0377 Durio zibethinus HOM05D001537 ORTHO05D002595 1.9e-45 186.8 213 46.9
VMungo0647G1246 Vigna mungo HOM05D001537 ORTHO05D002595 1.9e-45 186.8 196 46.9
CANSAT25G3097 Cannabis sativa HOM05D001537 ORTHO05D002595 2.4e-45 186.4 218 45.4
FAN18G0587 Fragaria x ananassa HOM05D001537 ORTHO05D002595 3.2e-45 186.0 198 48.0
Psat6g000440 Pisum sativum HOM05D001537 ORTHO05D002595 4.2e-45 185.7 199 45.2
Ah.11g041620 Amaranthus hybridus HOM05D001537 ORTHO05D002595 5.4e-45 185.3 204 44.1
C05p19320 Brassica napus HOM05D001537 ORTHO05D002595 5.4e-45 185.3 193 46.1
ClCG11G018810 Citrullus lanatus HOM05D001537 ORTHO05D002595 5.4e-45 185.3 211 46.4
Eucgr.F03572 Eucalyptus grandis HOM05D001537 ORTHO05D002595 5.4e-45 185.3 214 45.3
Lalb_Chr03g0033681 Lupinus albus HOM05D001537 ORTHO05D002595 1.2e-44 184.1 196 45.4
Medtr1g026490 Medicago truncatula HOM05D001537 ORTHO05D002595 1.2e-44 184.1 199 44.7
MELO3C017033.2 Cucumis melo HOM05D001537 ORTHO05D002595 1.6e-44 183.7 213 45.1
A06p16720 Brassica napus HOM05D001537 ORTHO05D002595 2.7e-44 183.0 193 45.6
CsaV3_4G037380 Cucumis sativus L. HOM05D001537 ORTHO05D002595 7.8e-44 181.4 212 46.2
Sed0022111 Sechium edule HOM05D001537 ORTHO05D002595 1.0e-43 181.0 211 44.1
Sp1g18440 Schrenkiella parvula HOM05D001537 ORTHO05D002595 1.3e-43 180.6 210 45.7
Lsat_1_v5_gn_2_860 Lactuca sativa HOM05D001537 ORTHO05D002595 5.1e-43 178.7 197 47.7
TPR.G26416 Trifolium pratense HOM05D001537 ORTHO05D002595 6.6e-43 178.3 210 43.3
PGR031G0149 Punica granatum HOM05D001537 ORTHO05D002595 2.5e-42 176.4 210 45.2
Nitab4.5_0000486g0210 Nicotiana tabacum HOM05D001537 ORTHO05D002595 3.3e-42 176.0 161 53.4
TAR628G1155 Trochodendron aralioides HOM05D001537 ORTHO05D002595 2.8e-41 172.9 148 58.1
Solyc10g079510.3 Solanum lycopersicum HOM05D001537 ORTHO05D002595 1.1e-40 171.0 175 50.9
Lsat_1_v5_gn_2_1140 Lactuca sativa HOM05D001537 ORTHO05D002595 5.8e-39 165.2 188 47.3
FvH4_5g25570 Fragaria vesca HOM05D001537 ORTHO05D002595 4.9e-38 162.2 152 52.0
Cpa.g.sc26.169 Carica papaya HOM05D001537 ORTHO05D017787 4.2e-37 159.1 217 42.9
arahy.Tifrunner.gnm1.ann1.UA1BSP Arachis hypogaea HOM05D001537 ORTHO05D002595 9.3e-37 157.9 221 40.3
Oeu029250.4 Olea europaea HOM05D001537 ORTHO05D002595 2.7e-36 156.4 134 51.5
Aa31LG7G4910 Aethionema arabicum HOM05D001537 ORTHO05D002595 3.0e-35 152.9 195 40.5
Carub.0001s2020 Capsella rubella HOM05D001537 ORTHO05D002595 3.0e-35 152.9 143 49.0
AL1G33740 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 1.5e-34 150.6 152 46.1
AT1G20750 Arabidopsis thaliana HOM05D001537 ORTHO05D002595 1.9e-34 150.2 143 46.9
arahy.Tifrunner.gnm1.ann1.74ZX0A Arachis hypogaea HOM05D001537 ORTHO05D002595 2.5e-34 149.8 209 41.6
Thhalv10009302m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 1.4e-32 144.1 145 47.6
C09p15070 Brassica napus HOM05D001537 ORTHO05D002595 3.1e-32 142.9 141 48.2
BolC9t54411H Brassica oleracea HOM05D001537 ORTHO05D002595 3.1e-32 142.9 141 48.2
SHI07968 Sapria himalayana HOM05D001537 ORTHO05D002595 1.5e-31 140.6 191 39.3
BraA09t36916Z Brassica rapa HOM05D001537 ORTHO05D002595 1.3e-30 137.5 141 48.9
MELO3C017034.2 Cucumis melo HOM05D001537 ORTHO05D002595 1.1e-29 134.4 191 40.3
Thhalv10006615m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 1.1e-29 134.4 139 47.5
BcaNung04092 Brassica carinata HOM05D001537 ORTHO05D002595 1.0e-27 127.9 133 45.9
HPP92_025944 Vanilla planifolia HOM05D001537 ORTHO05D002595 1.6e-25 120.6 197 35.5
ATR0807G057 Amborella trichopoda HOM05D001537 ORTHO05D002595 2.1e-25 120.2 147 43.5
HanXRQChr06g0185191 Helianthus annuus HOM05D001537 ORTHO05D002595 5.3e-24 115.5 164 37.8
CARHR021180 Cardamine hirsuta HOM05D001537 ORTHO05D002595 2.6e-23 113.2 143 39.2
BcaB07g32070 Brassica carinata HOM05D001537 ORTHO05D002595 1.3e-22 110.9 197 33.5
Zm00001eb320860 Zea mays HOM05D001537 ORTHO05D002595 2.7e-20 103.2 208 36.1
BcaC04g22810 Brassica carinata HOM05D001537 ORTHO05D002595 1.8e-19 100.5 126 42.9
Ca_25241_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 4.2e-13 79.3 100 43.0
Ca_14546_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 1.2e-12 77.8 87 44.8
SEGI_04288 Sequoiadendron giganteum HOM05D001537 ORTHO05D002595 6.0e-12 75.5 110 32.7
Pp3c10_650 Physcomitrium patens HOM05D001537 ORTHO05D002595 1.8e-08 63.9 107 30.8
A09p12720 Brassica napus HOM05D001537 ORTHO05D002595 2.4e-08 63.5 82 39.0
SMO340G0319 Selaginella moellendorffii HOM05D001537 ORTHO05D002595 3.4e-07 59.7 59 39.0


User provided reference genes

Program Settings