Gene: AT1G20720

General Information

Computational description RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20750.1); Has 2863 Blast hits to 2328 proteins in 675 species: Archae - 243; Bacteria - 679; Metazoa - 737; Fungi - 397; Plants - 210; Viruses - 5; Other Eukaryotes - 592 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006139	IEA	Gene Ontology	nucleobase-containing compound metabolic process
GO:0006139	IEA	InterPro	nucleobase-containing compound metabolic process
GO:0032508	IEA	GOA Database	DNA duplex unwinding
GO:0006289	IBA	Gene Ontology	nucleotide-excision repair	1
GO:1990918	IBA	Gene Ontology	double-strand break repair involved in meiotic recombination	1

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0016818	IEA	Gene Ontology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016818	IEA	InterPro	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0004386	IEA	GOA Database	helicase activity
GO:0004386	IEA	InterPro	helicase activity
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003678	IBA IEA	Gene Ontology	DNA helicase activity	1
GO:0003678	IEA	InterPro	DNA helicase activity
GO:0003677	IEA	GOA Database	DNA binding
GO:0003677	IEA	InterPro	DNA binding
GO:0016787	IEA	GOA Database	hydrolase activity

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005739	IDA	GOA Database	mitochondrion
GO:0005739	HDA	Gene Ontology	mitochondrion	2
GO:0005634	ISM, IBA	Gene Ontology	nucleus	1

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR010614	DEAD2
IPR045028	Helicase superfamily 1/2, DinG/Rad3-like
IPR006555	ATP-dependent helicase, C-terminal
IPR006554	Helicase-like, DEXD box c2 type

Mapman id	Description
14.8.2	DNA damage response.interstrand crosslink (ICL) repair.dsDNA helicase (FANCJ)