Gene: AT1G20750

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G20750
  • Transcript Identifier AT1G20750.1
  • Gene Type Coding gene
  • Location Chr1 : 7203302-7208998 : negative

Gene Family Information

  • ID HOM05D001537
  • #Genes/#Species 414/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G20750.1
  • uniprot F4HUN8

Descriptions

  • Description RAD3-like DNA-binding helicase protein
  • Computational description RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 2571 Blast hits to 1958 proteins in 520 species: Archae - 146; Bacteria - 396; Metazoa - 797; Fungi - 439; Plants - 210; Viruses - 2; Other Eukaryotes - 581 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006139
IEA
GOA Databasenucleobase-containing compound metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0006289
IBA
Gene Ontologynucleotide-excision repair1
GO:1990918
IBA
Gene Ontologydouble-strand break repair involved in meiotic recombination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016818
IEA
Gene Ontologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016818
IEA
InterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IBA
Gene OntologyDNA helicase activity1
GO:0003678
IEA
InterProDNA helicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006554 Helicase-like, DEXD box c2 type
IPR006555 ATP-dependent helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR045028 Helicase superfamily 1/2, DinG/Rad3-like
IPR010614 DEAD2
Mapman id Description
14.8.2 DNA damage response.interstrand crosslink (ICL) repair.dsDNA helicase (FANCJ)