Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21393 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.0e-89 332.4 167 100.0
vmacro21388 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 4.3e-36 155.2 82 91.5
Cpa.g.c34811.1 Carica papaya HOM05D000207 ORTHO05D004956 1.3e-35 153.7 91 80.2
C04p41370 Brassica napus HOM05D000207 ORTHO05D000606 2.2e-35 152.9 96 77.1
Oeu005091.1 Olea europaea HOM05D000207 ORTHO05D004956 2.2e-35 152.9 79 89.9
Actinidia39908 Actinidia chinensis HOM05D000207 ORTHO05D004956 3.7e-35 152.1 76 93.4
A04p07690 Brassica napus HOM05D000207 ORTHO05D000606 4.8e-35 151.8 88 80.7
EL10Ac3g04993 Beta vulgaris HOM05D000001 ORTHO05D000003 6.3e-35 151.4 73 97.3
BraA04t16461Z Brassica rapa HOM05D000207 ORTHO05D000606 6.3e-35 151.4 84 83.3
Aa31LG9G3040 Aethionema arabicum HOM05D001185 ORTHO05D002551 1.1e-34 150.6 74 94.6
Duzib043G0002 Durio zibethinus HOM05D000207 ORTHO05D004956 1.1e-34 150.6 76 94.7
Duzib160G0169 Durio zibethinus HOM05D000207 ORTHO05D004956 1.1e-34 150.6 76 94.7
Aqoxy1G01024 Aquilegia oxysepala HOM05D000207 ORTHO05D004956 1.4e-34 150.2 76 93.4
CSS0020261 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004956 1.4e-34 150.2 76 93.4
Duzib235G1015 Durio zibethinus HOM05D000207 ORTHO05D004956 1.4e-34 150.2 76 93.4
Gohir.A05G111600 Gossypium hirsutum HOM05D000207 ORTHO05D004956 1.4e-34 150.2 76 93.4
Gohir.D05G112000 Gossypium hirsutum HOM05D000207 ORTHO05D004956 1.4e-34 150.2 76 93.4
Gorai.009G116200 Gossypium raimondii HOM05D000207 ORTHO05D004956 1.4e-34 150.2 76 93.4
Hund03049 Selenicereus undatus HOM05D000207 ORTHO05D004956 1.4e-34 150.2 76 93.4
C07p14090 Brassica napus HOM05D000207 ORTHO05D004956 1.8e-34 149.8 85 87.1
FAN25G2312 Fragaria x ananassa HOM05D000207 ORTHO05D004956 1.8e-34 149.8 76 92.1
Sabra08G0128000 Salix brachista HOM05D000207 ORTHO05D004956 1.8e-34 149.8 73 94.5
Cc03_g05640 Coffea canephora HOM05D000207 ORTHO05D004956 2.4e-34 149.4 76 90.8
Lsat_1_v5_gn_3_117461 Lactuca sativa HOM05D000207 ORTHO05D004956 2.4e-34 149.4 76 92.1
RcHm_v2.0_Chr5g0039761 Rosa chinensis HOM05D000207 ORTHO05D004956 2.4e-34 149.4 76 92.1
vmacro15450 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.4e-34 149.4 70 100.0
BcaC02g09324 Brassica carinata HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
BcaC06g35508 Brassica carinata HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
A07p09140 Brassica napus HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
CANSAT54G2786 Cannabis sativa HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
MELO3C007190.2 Cucumis melo HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 93.4
Thhalv10021852m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
Nitab4.5_0001379g0120 Nicotiana tabacum HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 93.4
Nitab4.5_0003038g0050 Nicotiana tabacum HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 93.4
Potri.008G168000 Populus trichocarpa HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
Solyc04g008890.3 Solanum lycopersicum HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 93.4
Sopen04g004070 Solanum pennellii HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 93.4
PGSC0003DMG400025301 Solanum tuberosum HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 93.4
THA.LOC104808632 Tarenaya hassleriana HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
TAR365G0659 Trochodendron aralioides HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
GSVIVG01027834001 Vitis vinifera HOM05D000207 ORTHO05D004956 3.1e-34 149.1 76 92.1
ECA232G2626 Erigeron canadensis HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 92.1
ECA240G3918 Erigeron canadensis HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 92.1
HanXRQChr03g0091521 Helianthus annuus HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 92.1
HanXRQChr13g0421281 Helianthus annuus HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 92.1
Os08g0444100 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 90.8
PGR031G0434 Punica granatum HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 92.1
Sabra10G0036900 Salix brachista HOM05D000207 ORTHO05D004956 4.1e-34 148.7 72 95.8
Thecc.06G005500 Theobroma cacao HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 92.1
TWI53G1374 Tripterygium wilfordii HOM05D000207 ORTHO05D004956 4.1e-34 148.7 76 92.1
Zm00001eb176950 Zea mays HOM05D000207 ORTHO05D004956 4.1e-34 148.7 72 95.8
Atru.chr4.2043 Acer truncatum HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 90.8
Atru.chr4.2046 Acer truncatum HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 90.8
FvH4_3g22750 Fragaria vesca HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 90.8
FvH4_7g05750 Fragaria vesca HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 90.8
FAN16G2624 Fragaria x ananassa HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 90.8
Manes.15G041801 Manihot esculenta HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 90.8
Nn1g06872 Nelumbo nucifera HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 90.8
PSO063G3293 Papaver somniferum HOM05D000207 ORTHO05D004956 5.3e-34 148.3 78 87.2
Potri.010G070500 Populus trichocarpa HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 92.1
QL06p018332 Quercus lobata HOM05D000207 ORTHO05D004956 5.3e-34 148.3 72 95.8
SalBow3G2895 Salvia bowleyana HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 92.1
Hund11897 Selenicereus undatus HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 92.1
Sopen08g022730 Solanum pennellii HOM05D000207 ORTHO05D004956 5.3e-34 148.3 76 92.1
VMungo1127G0964 Vigna mungo HOM05D000207 ORTHO05D004956 5.3e-34 148.3 90 80.0
AL7G41900 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
AT4G14342 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
CANSAT78G1427 Cannabis sativa HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
Carub.0003s2357 Capsella rubella HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
CARHR099290 Cardamine hirsuta HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
Ciclev10013219m.g Citrus clementina HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
Thhalv10026688m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
FAN01G2221 Fragaria x ananassa HOM05D000207 ORTHO05D004956 6.9e-34 147.9 72 94.4
Sp3g20990 Schrenkiella parvula HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 90.8
Sed0003648 Sechium edule HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 92.1
Sed0023527 Sechium edule HOM05D000207 ORTHO05D004956 6.9e-34 147.9 76 92.1
arahy.Tifrunner.gnm1.ann1.Q94Q39 Arachis hypogaea HOM05D000677 ORTHO05D000727 9.1e-34 147.5 77 87.0
BcaB02g08614 Brassica carinata HOM05D000207 ORTHO05D000606 9.1e-34 147.5 76 90.8
BolC4t25716H Brassica oleracea HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
BolC7t41906H Brassica oleracea HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
BraA07t28708Z Brassica rapa HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
ClCG01G024000 Citrullus lanatus HOM05D000207 ORTHO05D004956 9.1e-34 147.5 86 81.4
COL.COLO4_26870 Corchorus olitorius HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
Migut.N00279 Erythranthe guttata HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 93.4
MD03G1200200 Malus domestica HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
PSO170G5684 Papaver somniferum HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
PSO198G0064 Papaver somniferum HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
PSO210G1216 Papaver somniferum HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 90.8
Solyc08g069080.4 Solanum lycopersicum HOM05D000207 ORTHO05D004956 9.1e-34 147.5 76 92.1
Actinidia11350 Actinidia chinensis HOM05D000207 ORTHO05D004956 1.2e-33 147.1 76 90.8
arahy.Tifrunner.gnm1.ann1.AU04TH Arachis hypogaea HOM05D000207 ORTHO05D004956 1.2e-33 147.1 73 91.8
arahy.Tifrunner.gnm1.ann1.DCT04E Arachis hypogaea HOM05D000207 ORTHO05D004956 1.2e-33 147.1 73 91.8
FAN06G2225 Fragaria x ananassa HOM05D000207 ORTHO05D004956 1.2e-33 147.1 103 69.9
Os08g0278966 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 1.2e-33 147.1 76 89.5
unitig_748.g7329 Utricularia gibba HOM05D000207 ORTHO05D000606 1.2e-33 147.1 80 87.5
HPP92_005064 Vanilla planifolia HOM05D000207 ORTHO05D004956 1.2e-33 147.1 72 94.4
CDE06G2823 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 1.5e-33 146.7 76 90.8
AUR62026315 Chenopodium quinoa HOM05D000207 ORTHO05D004956 1.5e-33 146.7 74 94.6
AUR62026510 Chenopodium quinoa HOM05D000207 ORTHO05D004956 1.5e-33 146.7 74 94.6
Ciclev10006856m.g Citrus clementina HOM05D000207 ORTHO05D004956 1.5e-33 146.7 84 85.7
MELO3C006416.2 Cucumis melo HOM05D000207 ORTHO05D004956 1.5e-33 146.7 76 90.8
CsaV3_3G012020 Cucumis sativus L. HOM05D000207 ORTHO05D004956 1.5e-33 146.7 76 90.8
Eucgr.E04319 Eucalyptus grandis HOM05D000207 ORTHO05D004956 1.5e-33 146.7 76 89.5
Prupe.4G214000 Prunus persica HOM05D000207 ORTHO05D004956 1.5e-33 146.7 76 90.8
Sp7g12410 Schrenkiella parvula HOM05D000207 ORTHO05D004956 1.5e-33 146.7 76 89.5
AL3G37970 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 2.0e-33 146.4 76 89.5
AT3G23325 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 2.0e-33 146.4 76 89.5
CiPaw.01G183100 Carya illinoinensis HOM05D000207 ORTHO05D004956 2.0e-33 146.4 72 94.4
CsaV3_6G051140 Cucumis sativus L. HOM05D000207 ORTHO05D004956 2.0e-33 146.4 86 83.7
Sc25g0003710 Simmondsia chinensis HOM05D000207 ORTHO05D004956 2.0e-33 146.4 74 93.2
MSTRG.21917 Avicennia marina HOM05D000207 ORTHO05D004956 2.6e-33 146.0 76 92.1
FAN03G1535 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.6e-33 146.0 71 94.4
FAN05G5047 Fragaria x ananassa HOM05D000709 ORTHO05D004956 2.6e-33 146.0 72 93.1
FAN10G1241 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.6e-33 146.0 71 94.4
FAN14G2395 Fragaria x ananassa HOM05D000709 ORTHO05D004956 2.6e-33 146.0 72 93.1
FAN16G2286 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.6e-33 146.0 76 89.5
Hma1.2p1_0992F.1_g245270 Hydrangea macrophylla HOM05D000207 ORTHO05D004956 2.6e-33 146.0 76 89.5
PSO210G6748 Papaver somniferum HOM05D000207 ORTHO05D004956 3.4e-33 145.6 76 88.2
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 4.5e-33 145.2 77 87.0
ClCG05G004290 Citrullus lanatus HOM05D000207 ORTHO05D004956 4.5e-33 145.2 76 89.5
MD11G1217300 Malus domestica HOM05D000207 ORTHO05D004956 4.5e-33 145.2 76 88.2
PGSC0003DMG400029581 Solanum tuberosum HOM05D000207 ORTHO05D004956 4.5e-33 145.2 76 90.8
DCAR_024259 Daucus carota HOM05D000207 ORTHO05D004956 5.9e-33 144.8 76 88.2
Dinv27061 Davidia involucrata HOM05D000207 ORTHO05D004956 5.9e-33 144.8 76 89.5
Lalb_Chr02g0158811 Lupinus albus HOM05D000207 ORTHO05D004956 5.9e-33 144.8 76 88.2
FAN02G2410 Fragaria x ananassa HOM05D000709 ORTHO05D004956 7.7e-33 144.4 72 91.7
Mapoly0001s0403 Marchantia polymorpha HOM05D000207 ORTHO05D004956 7.7e-33 144.4 76 88.2
Phvul.003G055200 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 7.7e-33 144.4 76 88.2
PGSC0003DMG400026872 Solanum tuberosum HOM05D000207 ORTHO05D004956 7.7e-33 144.4 77 92.2
HPP92_005049 Vanilla planifolia HOM05D000207 ORTHO05D004956 7.7e-33 144.4 78 87.2
Lsat_1_v5_gn_6_103061 Lactuca sativa HOM05D000207 ORTHO05D004956 1.0e-32 144.1 74 90.5
AagrBONN_evm.TU.Sc2ySwM_344.2015 Anthoceros agrestis HOM05D000207 ORTHO05D004956 1.3e-32 143.7 76 90.8
Cfa022948 Carpinus fangiana HOM05D000411 ORTHO05D004956 1.3e-32 143.7 75 88.0
Glyma.18G132700 Glycine max HOM05D000207 ORTHO05D004956 1.3e-32 143.7 76 86.8
Lj3g0015983 Lotus japonicus HOM05D000207 ORTHO05D004956 1.3e-32 143.7 76 86.8
SMO232G0034 Selaginella moellendorffii HOM05D000207 ORTHO05D004956 1.3e-32 143.7 72 91.7
FAN09G1394 Fragaria x ananassa HOM05D000709 ORTHO05D004956 1.7e-32 143.3 72 91.7
CiPaw.02G111100 Carya illinoinensis HOM05D000207 ORTHO05D004956 2.9e-32 142.5 76 88.2
Ca_08207_v3 Cicer arietinum L. HOM05D000207 ORTHO05D004956 3.8e-32 142.1 76 84.2
Psat4g126040 Pisum sativum HOM05D000207 ORTHO05D004956 3.8e-32 142.1 76 84.2
Psat6g018880 Pisum sativum HOM05D000207 ORTHO05D004956 3.8e-32 142.1 76 84.2
Migut.G00508 Erythranthe guttata HOM05D000207 ORTHO05D004956 5.0e-32 141.7 76 88.2
CBR_g8906 Chara braunii HOM05D000207 ORTHO05D004956 6.5e-32 141.4 76 86.8
Medtr3g019300 Medicago truncatula HOM05D000207 ORTHO05D004956 8.5e-32 141.0 76 82.9
Medtr3g019310 Medicago truncatula HOM05D000207 ORTHO05D004956 8.5e-32 141.0 76 82.9
Medtr8g062750 Medicago truncatula HOM05D000207 ORTHO05D004956 8.5e-32 141.0 76 82.9
Glyma.08G291500 Glycine max HOM05D000207 ORTHO05D004956 1.1e-31 140.6 79 83.5
Dinv36552 Davidia involucrata HOM05D000207 ORTHO05D004956 3.2e-31 139.0 74 89.2
arahy.Tifrunner.gnm1.ann1.6C1XPZ Arachis hypogaea HOM05D000207 ORTHO05D004956 5.5e-31 138.3 70 90.0
MBI16_g42515_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 1.6e-30 136.7 96 68.8
MBI07_g16899_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 2.3e-29 132.9 96 69.8
vmacro12999 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 1.7e-27 126.7 70 87.1
MD12G1011100 Malus domestica HOM05D000207 ORTHO05D004956 1.1e-26 124.0 90 70.0
MCO09G487 Micromonas commoda HOM05D000207 ORTHO05D004956 1.1e-26 124.0 74 77.0
Phvul.009G163800 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 3.1e-26 122.5 64 85.9
RcHm_v2.0_Chr7g0179491 Rosa chinensis HOM05D000207 ORTHO05D004956 2.0e-25 119.8 68 80.9
A06p07840 Brassica napus HOM05D000207 ORTHO05D004956 3.4e-25 119.0 81 74.1
Cre14.g627900 Chlamydomonas reinhardtii HOM05D000207 ORTHO05D004956 1.3e-24 117.1 73 72.6
PRCOL_00006150 Prasinoderma coloniale HOM05D000207 ORTHO05D004956 1.1e-23 114.0 76 69.7
VMungo0251G1197 Vigna mungo HOM05D000207 ORTHO05D004956 1.1e-23 114.0 55 92.7
unitig_32.g11701 Utricularia gibba HOM05D000207 ORTHO05D004956 2.5e-23 112.8 77 74.0
Lj4g0025571 Lotus japonicus HOM05D000207 ORTHO05D004956 8.8e-21 104.4 77 67.5
Gohir.1Z049411 Gossypium hirsutum HOM05D000207 ORTHO05D004956 6.3e-19 98.2 49 91.8
CAN.G274.30 Capsicum annuum HOM05D000207 ORTHO05D004956 4.5e-17 92.0 46 91.3
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.3e-16 90.5 45 86.7
A09p67600 Brassica napus HOM05D000207 ORTHO05D004956 2.9e-16 89.4 46 82.6
CDE02G4280 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 2.5e-15 86.3 45 86.7
Eucgr.L00218 Eucalyptus grandis HOM05D000207 ORTHO05D004956 3.2e-15 85.9 47 85.1
Lj4g0019776 Lotus japonicus HOM05D000207 ORTHO05D004956 7.2e-15 84.7 76 59.2
Pp3c25_1640 Physcomitrium patens HOM05D000207 ORTHO05D004956 1.0e-13 80.9 45 82.2
AagrBONN_evm.TU.Sc2ySwM_369.181 Anthoceros agrestis HOM05D000207 ORTHO05D004956 1.4e-13 80.5 45 80.0
vmacro16885 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 5.7e-12 75.1 46 78.3
AagrBONN_evm.TU.Sc2ySwM_344.4872 Anthoceros agrestis HOM05D000170 ORTHO05D000159 7.5e-12 74.7 38 89.5
Peaxi162Scf00681g00334 Petunia axillaris HOM05D000207 ORTHO05D004956 1.3e-08 63.9 31 96.8
Ah.14g081440 Amaranthus hybridus HOM05D000207 ORTHO05D004956 6.5e-08 61.6 36 75.0
MBI13_g27727_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 6.5e-08 61.6 31 90.3
Zm00001eb114180 Zea mays HOM05D000207 ORTHO05D004956 6.5e-08 61.6 38 78.9


User provided reference genes

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