Gene: PGSC0003DMG400029581

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400029581
  • Transcript Identifier PGSC0003DMT400076066
  • Gene Type Coding gene
  • Location ST4.03ch08 : 44842158-44848529 : negative

Gene Family Information

  • ID HOM05D000207
  • #Genes/#Species 1934/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37469807
  • id PGSC0003DMG400029581.v4.03
  • uniprot M1CW53

Descriptions

  • Description Splicing factor 3B subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
InterProATP binding
GO:0004674
ISO
PLAZA Homology (enrichment)protein serine/threonine kinase activity HOM05D000207

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009846 Splicing factor 3B subunit 5/RDS3 complex subunit 10
IPR000719 Protein kinase domain
IPR011009 Protein kinase-like domain superfamily
Mapman id Description
16.2.1.2.4.5 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B5