Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19776 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 3.1e-119 431.8 218 100.0
vmacro19775 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 4.1e-111 404.8 249 85.1
vmacro13976 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 1.6e-75 286.6 250 65.6
Rhsim01G0112900 Rhododendron simsii HOM05D003241 ORTHO05D003812 1.8e-74 283.1 208 73.1
Actinidia29972 Actinidia chinensis HOM05D003241 ORTHO05D003812 2.5e-68 262.7 206 68.4
TAR381G1550 Trochodendron aralioides HOM05D003241 ORTHO05D003812 3.6e-67 258.8 219 63.9
TAR625G1302 Trochodendron aralioides HOM05D003241 ORTHO05D003812 1.8e-66 256.5 219 63.0
TAR571G0002 Trochodendron aralioides HOM05D003241 ORTHO05D003812 4.0e-66 255.4 219 63.0
Oeu011820.1 Olea europaea HOM05D003241 ORTHO05D003812 1.2e-65 253.8 206 66.0
Oeu058578.1 Olea europaea HOM05D003241 ORTHO05D003812 1.2e-65 253.8 206 66.5
Dinv19008 Davidia involucrata HOM05D003241 ORTHO05D003812 1.5e-65 253.4 208 65.9
Nn5g27739 Nelumbo nucifera HOM05D003241 ORTHO05D003812 1.5e-65 253.4 208 63.9
Cpa.g.sc115.47 Carica papaya HOM05D003241 ORTHO05D003812 2.6e-65 252.7 221 62.4
Dinv09319 Davidia involucrata HOM05D003241 ORTHO05D003812 5.8e-65 251.5 208 65.9
GSVIVG01035173001 Vitis vinifera HOM05D003241 ORTHO05D003812 9.9e-65 250.8 208 63.0
Migut.J00827 Erythranthe guttata HOM05D003241 ORTHO05D003812 1.3e-64 250.4 215 62.8
Lj2C819G2 Lonicera japonica HOM05D003241 ORTHO05D003812 3.8e-64 248.8 212 61.8
Nitab4.5_0004325g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 6.4e-64 248.1 208 62.5
Nitab4.5_0004385g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 1.1e-63 247.3 208 62.5
Ca_13374_v3 Cicer arietinum L. HOM05D003241 ORTHO05D003812 1.9e-63 246.5 217 60.4
Phvul.011G184800 Phaseolus vulgaris HOM05D003241 ORTHO05D003812 2.4e-63 246.1 222 59.5
Duzib268G1256 Durio zibethinus HOM05D003241 ORTHO05D003812 4.2e-63 245.4 215 63.7
Duzib213G0093 Durio zibethinus HOM05D003241 ORTHO05D003812 7.1e-63 244.6 219 60.7
Gohir.D05G337200 Gossypium hirsutum HOM05D003241 ORTHO05D003812 1.2e-62 243.8 220 60.9
Gorai.009G361400 Gossypium raimondii HOM05D003241 ORTHO05D003812 1.2e-62 243.8 220 60.9
SalBow3G1087 Salvia bowleyana HOM05D003241 ORTHO05D003812 1.2e-62 243.8 211 64.0
Gohir.A04G045600 Gossypium hirsutum HOM05D003241 ORTHO05D003812 1.6e-62 243.4 220 60.9
DCAR_019828 Daucus carota HOM05D003241 ORTHO05D003812 2.1e-62 243.0 212 61.8
Lsat_1_v5_gn_1_54260 Lactuca sativa HOM05D003241 ORTHO05D003812 2.7e-62 242.7 209 63.6
Lj3g0022607 Lotus japonicus HOM05D003241 ORTHO05D003812 2.7e-62 242.7 217 59.0
ECA248G0833 Erigeron canadensis HOM05D003241 ORTHO05D003812 3.5e-62 242.3 220 59.5
Lalb_Chr19g0130441 Lupinus albus HOM05D003241 ORTHO05D003812 3.5e-62 242.3 217 61.3
Lalb_Chr03g0032261 Lupinus albus HOM05D003241 ORTHO05D003812 6.0e-62 241.5 217 61.3
CAN.G321.38 Capsicum annuum HOM05D003241 ORTHO05D003812 7.9e-62 241.1 208 62.0
CiPaw.02G097400 Carya illinoinensis HOM05D003241 ORTHO05D003812 1.8e-61 240.0 224 58.5
Thhalv10012684m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 2.3e-61 239.6 219 61.2
HanXRQChr09g0244631 Helianthus annuus HOM05D003241 ORTHO05D003812 2.3e-61 239.6 214 60.7
PGR031G3475 Punica granatum HOM05D003241 ORTHO05D003812 3.0e-61 239.2 208 61.1
Solyc11g008470.2 Solanum lycopersicum HOM05D003241 ORTHO05D003812 3.9e-61 238.8 208 59.6
Glyma.08G229600 Glycine max HOM05D003241 ORTHO05D003812 5.1e-61 238.4 226 57.5
Glyma.07G220800 Glycine max HOM05D003241 ORTHO05D003812 1.1e-60 237.3 223 58.7
Sopen11g004250 Solanum pennellii HOM05D003241 ORTHO05D003812 1.1e-60 237.3 208 59.6
Cfa015650 Carpinus fangiana HOM05D003241 ORTHO05D003812 1.9e-60 236.5 224 57.6
Manes.16G074400 Manihot esculenta HOM05D003241 ORTHO05D003812 1.9e-60 236.5 215 60.0
Medtr1g083910 Medicago truncatula HOM05D003241 ORTHO05D003812 2.5e-60 236.1 217 59.4
TWI32G0731 Tripterygium wilfordii HOM05D003241 ORTHO05D003812 2.5e-60 236.1 212 60.8
arahy.Tifrunner.gnm1.ann1.2W1DSR Arachis hypogaea HOM05D003241 ORTHO05D003812 3.3e-60 235.7 232 56.9
MBI18_g28212_MAGBIO Magnolia biondii HOM05D003241 ORTHO05D003812 9.6e-60 234.2 222 58.6
QL06p002249 Quercus lobata HOM05D003241 ORTHO05D003812 9.6e-60 234.2 224 57.1
QL06p002393 Quercus lobata HOM05D003241 ORTHO05D003812 9.6e-60 234.2 224 57.1
TPR.G2613 Trifolium pratense HOM05D003241 ORTHO05D003812 9.6e-60 234.2 218 58.7
Ciclev10000233m.g Citrus clementina HOM05D003241 ORTHO05D003812 1.3e-59 233.8 212 60.4
PGSC0003DMG400007426 Solanum tuberosum HOM05D003241 ORTHO05D003812 1.6e-59 233.4 208 58.7
SGA_v2.0_scaffold31G12724 Striga asiatica HOM05D003241 ORTHO05D003812 2.1e-59 233.0 213 59.2
arahy.Tifrunner.gnm1.ann1.61N80Q Arachis hypogaea HOM05D003241 ORTHO05D003812 2.8e-59 232.6 237 55.3
AL6G27800 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 3.6e-59 232.3 215 60.5
BcaC04g18849 Brassica carinata HOM05D003241 ORTHO05D003812 3.6e-59 232.3 210 61.0
BolC9t58862H Brassica oleracea HOM05D003241 ORTHO05D003812 3.6e-59 232.3 210 61.0
unitig_77.g31483 Utricularia gibba HOM05D003241 ORTHO05D003812 3.6e-59 232.3 214 58.4
Haze_00894 Corylus avellana HOM05D003241 ORTHO05D003812 4.8e-59 231.9 224 56.7
Eucgr.J03092 Eucalyptus grandis HOM05D003241 ORTHO05D003812 4.8e-59 231.9 222 59.9
Aa31LG11G12850 Aethionema arabicum HOM05D003241 ORTHO05D003812 6.2e-59 231.5 211 61.1
BcaC04g18848 Brassica carinata HOM05D003241 ORTHO05D003812 6.2e-59 231.5 210 61.0
Carub.0006s1500 Capsella rubella HOM05D003241 ORTHO05D003812 1.1e-58 230.7 215 60.0
C09p60290 Brassica napus HOM05D003241 ORTHO05D003812 2.4e-58 229.6 210 60.5
CARHR196380 Cardamine hirsuta HOM05D003241 ORTHO05D003812 2.4e-58 229.6 220 58.2
AT5G16780 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 3.1e-58 229.2 220 59.1
COL.COLO4_17461 Corchorus olitorius HOM05D003241 ORTHO05D003812 6.9e-58 228.0 231 57.1
Prupe.1G014100 Prunus persica HOM05D003241 ORTHO05D003812 6.9e-58 228.0 259 51.4
Hund17599 Selenicereus undatus HOM05D003241 ORTHO05D003812 9.0e-58 227.6 221 57.0
Atru.chr4.2711 Acer truncatum HOM05D003241 ORTHO05D003812 1.5e-57 226.9 225 56.0
A10p22440 Brassica napus HOM05D003241 ORTHO05D003812 2.6e-57 226.1 214 58.9
BraA10t44303Z Brassica rapa HOM05D003241 ORTHO05D003812 2.6e-57 226.1 214 58.9
Peaxi162Scf00296g00721 Petunia axillaris HOM05D003241 ORTHO05D003812 4.5e-57 225.3 221 58.8
Potri.001G082100 Populus trichocarpa HOM05D003241 ORTHO05D003812 5.8e-57 224.9 224 58.0
CsaV3_5G040300 Cucumis sativus L. HOM05D003241 ORTHO05D003812 7.6e-57 224.6 226 56.6
MD13G1193700 Malus domestica HOM05D003241 ORTHO05D003812 1.7e-56 223.4 264 49.2
MELO3C022204.2 Cucumis melo HOM05D003241 ORTHO05D003812 2.2e-56 223.0 226 56.2
ATR1098G045 Amborella trichopoda HOM05D003241 ORTHO05D003812 2.9e-56 222.6 210 55.7
HPP92_003413 Vanilla planifolia HOM05D003241 ORTHO05D008621 2.9e-56 222.6 223 56.5
Aqoxy4G03221 Aquilegia oxysepala HOM05D003241 ORTHO05D003812 1.1e-55 220.7 224 55.4
EL10Ac6g15598 Beta vulgaris HOM05D003241 ORTHO05D003812 1.4e-55 220.3 230 53.9
AUR62018246 Chenopodium quinoa HOM05D003241 ORTHO05D003812 1.9e-55 219.9 230 52.2
ECA248G0244 Erigeron canadensis HOM05D003241 ORTHO05D003812 1.9e-55 219.9 209 57.9
Sed0020388 Sechium edule HOM05D003241 ORTHO05D003812 2.4e-55 219.5 226 55.3
AUR62034840 Chenopodium quinoa HOM05D003241 ORTHO05D003812 1.2e-54 217.2 227 52.4
SEGI_01763 Sequoiadendron giganteum HOM05D003241 ORTHO05D003812 3.5e-54 215.7 219 51.1
Thecc.07G135300 Theobroma cacao HOM05D003241 ORTHO05D003812 1.1e-52 210.7 219 55.3
unitig_749.g14191 Utricularia gibba HOM05D003241 ORTHO05D003812 1.1e-52 210.7 157 67.5
Lj2A813G14 Lonicera japonica HOM05D003241 ORTHO05D003812 1.9e-52 209.9 219 53.9
MD16G1194300 Malus domestica HOM05D003241 ORTHO05D003812 1.9e-52 209.9 245 50.6
ClCG08G000490 Citrullus lanatus HOM05D003241 ORTHO05D003812 3.3e-52 209.1 172 65.7
RcHm_v2.0_Chr4g0416151 Rosa chinensis HOM05D003241 ORTHO05D003812 3.3e-52 209.1 258 48.1
Psat6g151960 Pisum sativum HOM05D003241 ORTHO05D003812 1.3e-51 207.2 209 57.9
Os02g0511500 Oryza sativa ssp. japonica HOM05D003241 ORTHO05D003812 2.1e-51 206.5 212 53.8
PSO013G0353 Papaver somniferum HOM05D003241 ORTHO05D003812 2.1e-51 206.5 209 54.5
QL09p049212 Quercus lobata HOM05D003241 ORTHO05D003812 2.8e-51 206.1 167 67.1
FAN27G2894 Fragaria x ananassa HOM05D003241 ORTHO05D003812 3.7e-51 205.7 243 50.6
FAN15G1779 Fragaria x ananassa HOM05D003241 ORTHO05D003812 4.8e-51 205.3 242 50.4
PSO063G3239 Papaver somniferum HOM05D003241 ORTHO05D003812 8.1e-51 204.5 209 54.1
PSO339G6261 Papaver somniferum HOM05D003241 ORTHO05D003812 8.1e-51 204.5 213 53.5
PSO339G1389 Papaver somniferum HOM05D003241 ORTHO05D003812 1.1e-50 204.1 209 53.6
FvH4_4g15641 Fragaria vesca HOM05D003241 ORTHO05D003812 1.4e-50 203.8 243 50.2
FAN12G3728 Fragaria x ananassa HOM05D003241 ORTHO05D003812 1.4e-50 203.8 247 49.0
Zm00001eb140630 Zea mays HOM05D003241 ORTHO05D003812 1.4e-50 203.8 211 52.1
RcHm_v2.0_Chr4g0416161 Rosa chinensis HOM05D003241 ORTHO05D003812 1.2e-49 200.7 247 48.2
FAN17G1371 Fragaria x ananassa HOM05D003241 ORTHO05D003812 7.6e-49 198.0 246 49.2
FAN20G2531 Fragaria x ananassa HOM05D003241 ORTHO05D003812 7.6e-49 198.0 248 48.4
Medtr1g032020 Medicago truncatula HOM05D003241 ORTHO05D003812 1.1e-47 194.1 230 50.4
Medtr1g032350 Medicago truncatula HOM05D003241 ORTHO05D003812 1.1e-47 194.1 230 50.4
COL.COLO4_13873 Corchorus olitorius HOM05D003241 ORTHO05D003812 2.7e-46 189.5 212 52.8
Lj6g0011042 Lotus japonicus HOM05D003241 ORTHO05D003812 3.5e-46 189.1 210 51.9
Pp3c15_10170 Physcomitrium patens HOM05D003241 ORTHO05D003812 2.3e-45 186.4 218 48.6
Mapoly0063s0006 Marchantia polymorpha HOM05D003241 ORTHO05D003812 5.1e-45 185.3 216 49.1
AagrBONN_evm.TU.Sc2ySwM_344.1153__1154 Anthoceros agrestis HOM05D003241 ORTHO05D003812 8.7e-45 184.5 222 50.0
Eucgr.L01432 Eucalyptus grandis HOM05D003241 ORTHO05D003812 1.1e-44 184.1 201 56.2
CSS0028609 Camellia sinensis var. sinensis HOM05D003241 ORTHO05D003812 7.4e-44 181.4 166 60.2
CBR_g32002 Chara braunii HOM05D003241 ORTHO05D003812 9.6e-44 181.0 132 68.2
Actinidia38515 Actinidia chinensis HOM05D003241 ORTHO05D003812 1.4e-42 177.2 161 60.2
SMO361G0171 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 2.4e-42 176.4 215 47.0
PGSC0003DMG400024746 Solanum tuberosum HOM05D003241 ORTHO05D003812 5.0e-40 168.7 206 50.0
Nitab4.5_0002344g0060 Nicotiana tabacum HOM05D003241 ORTHO05D003812 5.1e-37 158.7 180 51.7
Sopen01g042940 Solanum pennellii HOM05D003241 ORTHO05D003812 1.5e-33 147.1 194 47.4
Solyc01g099380.4 Solanum lycopersicum HOM05D003241 ORTHO05D003812 4.5e-33 145.6 197 47.2
Peaxi162Scf00067g00244 Petunia axillaris HOM05D003241 ORTHO05D003812 7.7e-33 144.8 167 51.5
AagrBONN_evm.TU.Sc2ySwM_117.3043 Anthoceros agrestis HOM05D003241 ORTHO05D003812 1.7e-32 143.7 220 42.7
Psat0s3089g0040 Pisum sativum HOM05D003241 ORTHO05D003812 5.0e-32 142.1 149 52.3
VMungo1127G0135 Vigna mungo HOM05D003241 ORTHO05D003812 1.1e-31 141.0 182 46.7
Migut.N01793 Erythranthe guttata HOM05D003241 ORTHO05D003812 7.2e-31 138.3 130 57.7
QL11p041824 Quercus lobata HOM05D003241 ORTHO05D003812 7.2e-31 138.3 162 49.4
CDE06G2045 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 3.0e-29 132.9 152 53.3
Hma1.2p1_0765F.1_g215090 Hydrangea macrophylla HOM05D003241 ORTHO05D003812 1.7e-27 127.1 137 53.3
Nitab4.5_0014335g0020 Nicotiana tabacum HOM05D003241 ORTHO05D003812 2.2e-27 126.7 94 70.2
Lju445A0T13 Lonicera japonica HOM05D003241 ORTHO05D003812 2.8e-27 126.3 99 64.6
Hma1.2p1_0358F.1_g134820 Hydrangea macrophylla HOM05D003241 ORTHO05D003812 3.7e-27 125.9 137 53.3
Eucgr.L02270 Eucalyptus grandis HOM05D001083 ORTHO05D003812 4.8e-27 125.6 84 77.4
Actinidia21372 Actinidia chinensis HOM05D003241 ORTHO05D003812 3.4e-25 119.4 137 48.9
QL09p049197 Quercus lobata HOM05D003241 ORTHO05D003812 3.4e-25 119.4 99 64.6
Atru.chr1.2009 Acer truncatum HOM05D003241 ORTHO05D003812 4.5e-25 119.0 131 54.2
RcHm_v2.0_Chr7g0234901 Rosa chinensis HOM05D003241 ORTHO05D003812 2.9e-24 116.3 214 39.7
CDE03G0251 Ceratophyllum demersum HOM05D003241 ORTHO05D003812 8.5e-24 114.8 204 37.7
MD07G1289000 Malus domestica HOM05D003241 ORTHO05D003812 3.9e-21 105.9 128 48.4
MCO08G320 Micromonas commoda HOM05D003241 ORTHO05D003812 5.2e-21 105.5 151 40.4
AagrBONN_evm.TU.Sc2ySwM_117.3514 Anthoceros agrestis HOM05D003241 ORTHO05D003812 2.6e-20 103.2 142 42.3
Lj1A444G10 Lonicera japonica HOM05D003241 ORTHO05D003812 3.3e-20 102.8 137 45.3
AL3G27010 Arabidopsis lyrata HOM05D003241 ORTHO05D003812 1.7e-19 100.5 151 41.1
Thhalv10022422m.g Eutrema salsugineum HOM05D003241 ORTHO05D003812 4.8e-19 99.0 142 43.7
Cre03.g156100 Chlamydomonas reinhardtii HOM05D003241 ORTHO05D003812 1.4e-18 97.4 140 40.7
Sp6g27340 Schrenkiella parvula HOM05D003241 ORTHO05D003812 1.4e-18 97.4 115 48.7
AT3G14700 Arabidopsis thaliana HOM05D003241 ORTHO05D003812 1.8e-18 97.1 144 41.7
A05p34740 Brassica napus HOM05D003241 ORTHO05D003812 5.3e-18 95.5 150 42.7
Rhsim06G0183100 Rhododendron simsii HOM05D003241 ORTHO05D003812 9.1e-18 94.7 129 46.5
VMungo1127G1632 Vigna mungo HOM05D003241 ORTHO05D003812 3.5e-17 92.8 58 79.3
Rhsim06G0182100 Rhododendron simsii HOM05D003241 ORTHO05D003812 4.5e-17 92.4 129 45.7
BraA05t22289Z Brassica rapa HOM05D003241 ORTHO05D003812 7.7e-17 91.7 138 43.5
Haze_08784 Corylus avellana HOM05D003241 ORTHO05D003812 1.0e-16 91.3 92 54.3
SMO111G0075 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 2.9e-16 89.7 156 39.1
BcaC05g29043 Brassica carinata HOM05D003241 ORTHO05D003812 3.8e-16 89.4 155 41.9
Aa31LG8G1930 Aethionema arabicum HOM05D003241 ORTHO05D000015 6.5e-16 88.6 114 50.0
AagrBONN_evm.TU.Sc2ySwM_344.225 Anthoceros agrestis HOM05D003241 ORTHO05D003812 8.5e-16 88.2 155 40.0
vmacro00335 Vaccinium macrocarpon HOM05D003241 ORTHO05D003812 1.5e-15 87.4 129 42.6
SalBow6G1729 Salvia bowleyana HOM05D003241 ORTHO05D003812 5.5e-15 85.5 63 69.8
SalBow6G5488 Salvia bowleyana HOM05D003241 ORTHO05D003812 5.5e-15 85.5 63 69.8
BcaB06g25362 Brassica carinata HOM05D003241 ORTHO05D003812 7.2e-15 85.1 155 41.3
Actinidia16705 Actinidia chinensis HOM05D003241 ORTHO05D003812 2.1e-14 83.6 96 49.0
PRCOL_00003741 Prasinoderma coloniale HOM05D003241 ORTHO05D003812 6.1e-14 82.0 131 36.6
C05p52560 Brassica napus HOM05D003241 ORTHO05D003812 8.0e-14 81.6 128 44.5
Carub.0003s1438 Capsella rubella HOM05D003241 ORTHO05D003812 3.0e-13 79.7 123 39.8
SMO111G0085 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 3.0e-13 79.7 148 37.2
CAN.G1652.14 Capsicum annuum HOM05D003241 ORTHO05D003812 1.2e-12 77.8 135 39.3
SMO351G0236 Selaginella moellendorffii HOM05D003241 ORTHO05D003812 1.2e-12 77.8 140 38.6
FAN07G0113 Fragaria x ananassa HOM05D003241 ORTHO05D003812 3.8e-08 62.8 46 69.6
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-08 62.8 52 55.8
Hma1.2p1_0148F.1_g066050 Hydrangea macrophylla HOM05D003241 ORTHO05D003812 6.5e-08 62.0 38 78.9
Actinidia17691 Actinidia chinensis HOM05D003241 ORTHO05D003812 2.5e-07 60.1 83 43.4
FAN22G0104 Fragaria x ananassa HOM05D003241 ORTHO05D003812 5.5e-07 58.9 100 39.0


User provided reference genes

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