Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17559 Vaccinium macrocarpon HOM05D003283 ORTHO05D018541 2.0e-121 439.1 222 100.0
Rhsim08G0157300 Rhododendron simsii HOM05D003283 ORTHO05D004037 4.0e-37 159.1 132 67.4
Actinidia04908 Actinidia chinensis HOM05D003283 ORTHO05D004037 5.8e-36 155.2 132 64.4
Dinv19938 Davidia involucrata HOM05D003283 ORTHO05D004037 2.1e-30 136.7 132 57.6
CSS0033711 Camellia sinensis var. sinensis HOM05D003283 ORTHO05D004037 4.7e-30 135.6 122 65.6
Hma1.2p1_0735F.1_g210410 Hydrangea macrophylla HOM05D003283 ORTHO05D004037 9.9e-28 127.9 132 55.3
CiPaw.11G042000 Carya illinoinensis HOM05D003283 ORTHO05D004037 1.2e-25 120.9 131 51.9
Prupe.5G189500 Prunus persica HOM05D003283 ORTHO05D004037 7.8e-25 118.2 127 54.3
Cfa018966 Carpinus fangiana HOM05D003283 ORTHO05D004037 1.0e-24 117.9 134 50.7
ECA246G5347 Erigeron canadensis HOM05D003283 ORTHO05D004037 1.7e-24 117.1 126 52.4
Haze_07348 Corylus avellana HOM05D003283 ORTHO05D004037 2.3e-24 116.7 131 50.4
CANSAT80G1070 Cannabis sativa HOM05D003283 ORTHO05D004037 1.9e-23 113.6 133 46.6
MD06G1190600 Malus domestica HOM05D003283 ORTHO05D004037 4.3e-23 112.5 126 51.6
TAR629G1579 Trochodendron aralioides HOM05D003283 ORTHO05D018541 4.3e-23 112.5 134 47.0
MD14G1197500 Malus domestica HOM05D003283 ORTHO05D004037 7.3e-23 111.7 126 52.4
TAR371G0980 Trochodendron aralioides HOM05D003283 ORTHO05D004037 9.6e-23 111.3 131 48.1
FAN13G0270 Fragaria x ananassa HOM05D003283 ORTHO05D004037 1.4e-21 107.5 121 53.7
FAN18G1573 Fragaria x ananassa HOM05D003283 ORTHO05D004037 1.4e-21 107.5 121 52.9
HanXRQChr05g0158061 Helianthus annuus HOM05D003283 ORTHO05D004037 1.8e-21 107.1 126 51.6
FvH4_5g15230 Fragaria vesca HOM05D003283 ORTHO05D004037 2.4e-21 106.7 123 51.2
FAN08G3069 Fragaria x ananassa HOM05D003283 ORTHO05D004037 6.9e-21 105.1 121 52.1
QL10p016258 Quercus lobata HOM05D003283 ORTHO05D004037 8.9e-21 104.8 129 49.6
FAN04G0644 Fragaria x ananassa HOM05D003283 ORTHO05D004037 1.2e-20 104.4 121 52.9
Lsat_1_v5_gn_5_18780 Lactuca sativa HOM05D003283 ORTHO05D004037 1.2e-20 104.4 126 48.4
TWI60G1478 Tripterygium wilfordii HOM05D003283 ORTHO05D004037 1.5e-20 104.0 150 44.0
GSVIVG01008031001 Vitis vinifera HOM05D003283 ORTHO05D004037 1.5e-20 104.0 128 46.9
RcHm_v2.0_Chr7g0180931 Rosa chinensis HOM05D003283 ORTHO05D004037 2.0e-20 103.6 121 52.1
PSO017G6266 Papaver somniferum HOM05D003283 ORTHO05D004037 4.4e-20 102.4 126 47.6
PGR044G0877 Punica granatum HOM05D003283 ORTHO05D004037 9.9e-20 101.3 122 47.5
Atru.chr9.2284 Acer truncatum HOM05D003283 ORTHO05D004037 1.3e-19 100.9 123 48.8
Nitab4.5_0010552g0010 Nicotiana tabacum HOM05D003283 ORTHO05D004037 1.3e-19 100.9 124 46.8
PSO063G5465 Papaver somniferum HOM05D003283 ORTHO05D004037 1.3e-19 100.9 126 46.8
Nitab4.5_0000785g0040 Nicotiana tabacum HOM05D003283 ORTHO05D004037 1.7e-19 100.5 125 46.4
Potri.015G063100 Populus trichocarpa HOM05D003283 ORTHO05D004037 1.7e-19 100.5 128 49.2
PSO782G0417 Papaver somniferum HOM05D003283 ORTHO05D004037 4.9e-19 99.0 126 46.0
Nn4g23104 Nelumbo nucifera HOM05D003283 ORTHO05D004037 6.4e-19 98.6 121 46.3
Eucgr.K02465 Eucalyptus grandis HOM05D003283 ORTHO05D004037 8.4e-19 98.2 128 47.7
Peaxi162Scf00009g00230 Petunia axillaris HOM05D003283 ORTHO05D004037 8.4e-19 98.2 126 46.0
Hma1.2p1_3455F.1_g336090 Hydrangea macrophylla HOM05D003283 ORTHO05D018541 1.1e-18 97.8 110 52.7
AL5G26980 Arabidopsis lyrata HOM05D003283 ORTHO05D004037 1.4e-18 97.4 129 45.0
Ciclev10018904m.g Citrus clementina HOM05D003283 ORTHO05D004037 1.4e-18 97.4 123 46.3
Sed0015377 Sechium edule HOM05D003283 ORTHO05D004037 2.4e-18 96.7 123 45.5
Thecc.03G083200 Theobroma cacao HOM05D003283 ORTHO05D004037 2.4e-18 96.7 121 49.6
MELO3C018518.2 Cucumis melo HOM05D003283 ORTHO05D004037 4.2e-18 95.9 123 44.7
ClCG02G006810 Citrullus lanatus HOM05D003283 ORTHO05D004037 5.4e-18 95.5 123 44.7
Sp5g14220 Schrenkiella parvula HOM05D003283 ORTHO05D004037 5.4e-18 95.5 129 44.2
Aqoxy3G03338 Aquilegia oxysepala HOM05D003283 ORTHO05D004037 7.1e-18 95.1 122 45.9
A06p19900 Brassica napus HOM05D003283 ORTHO05D004037 9.3e-18 94.7 125 44.0
CsaV3_7G007830 Cucumis sativus L. HOM05D003283 ORTHO05D004037 9.3e-18 94.7 123 43.9
Lj9A461G45 Lonicera japonica HOM05D003283 ORTHO05D004037 2.1e-17 93.6 101 55.4
DCAR_002380 Daucus carota HOM05D003283 ORTHO05D004037 2.7e-17 93.2 120 45.0
HPP92_016453 Vanilla planifolia HOM05D003283 ORTHO05D004037 2.7e-17 93.2 120 45.8
CARHR156380 Cardamine hirsuta HOM05D003283 ORTHO05D004037 4.6e-17 92.4 130 44.6
BolC3t19490H Brassica oleracea HOM05D003283 ORTHO05D004037 6.0e-17 92.0 126 43.7
HPP92_016261 Vanilla planifolia HOM05D003283 ORTHO05D004037 6.0e-17 92.0 120 45.8
Aa31LG4G16410 Aethionema arabicum HOM05D003283 ORTHO05D004037 7.8e-17 91.7 129 42.6
AT3G47700 Arabidopsis thaliana HOM05D003283 ORTHO05D004037 1.3e-16 90.9 129 42.6
BcaC01g01781 Brassica carinata HOM05D003283 ORTHO05D004037 1.3e-16 90.9 126 43.7
C03p71930 Brassica napus HOM05D003283 ORTHO05D004037 1.3e-16 90.9 126 43.7
Duzib084G0529 Durio zibethinus HOM05D003283 ORTHO05D004037 1.3e-16 90.9 121 47.9
Solyc03g113000.3 Solanum lycopersicum HOM05D003283 ORTHO05D004037 1.3e-16 90.9 123 44.7
arahy.Tifrunner.gnm1.ann1.N5P3C8 Arachis hypogaea HOM05D003283 ORTHO05D004037 1.7e-16 90.5 119 46.2
arahy.Tifrunner.gnm1.ann1.Q5PT82 Arachis hypogaea HOM05D003283 ORTHO05D004037 1.7e-16 90.5 119 46.2
BraA06t25074Z Brassica rapa HOM05D003283 ORTHO05D004037 1.7e-16 90.5 125 42.4
COL.COLO4_08427 Corchorus olitorius HOM05D003283 ORTHO05D004037 3.0e-16 89.7 119 47.9
COL.COLO4_35507 Corchorus olitorius HOM05D003283 ORTHO05D018541 3.9e-16 89.4 123 46.3
Sopen03g032070 Solanum pennellii HOM05D003283 ORTHO05D004037 3.9e-16 89.4 123 43.9
PGSC0003DMG400018089 Solanum tuberosum HOM05D003283 ORTHO05D004037 3.9e-16 89.4 123 43.9
DCAR_009634 Daucus carota HOM05D003283 ORTHO05D004037 5.1e-16 89.0 126 44.4
Sabra15G0088300 Salix brachista HOM05D003283 ORTHO05D004037 5.1e-16 89.0 128 45.3
Carub.0005s1383 Capsella rubella HOM05D003283 ORTHO05D004037 6.6e-16 88.6 135 40.0
Gohir.D12G179120 Gossypium hirsutum HOM05D003283 ORTHO05D018541 8.7e-16 88.2 126 44.4
Lalb_Chr19g0125481 Lupinus albus HOM05D003283 ORTHO05D004037 8.7e-16 88.2 127 44.1
MBI05_g00384_MAGBIO Magnolia biondii HOM05D003283 ORTHO05D004037 1.1e-15 87.8 128 42.2
Gohir.A12G176200 Gossypium hirsutum HOM05D003283 ORTHO05D004037 1.5e-15 87.4 121 46.3
Thhalv10011079m.g Eutrema salsugineum HOM05D003283 ORTHO05D004037 1.9e-15 87.0 129 41.1
Gohir.D12G179160 Gossypium hirsutum HOM05D000610 ORTHO05D001284 2.5e-15 86.7 121 45.5
Gohir.D12G179200 Gossypium hirsutum HOM05D003283 ORTHO05D004037 2.5e-15 86.7 121 45.5
SGA_v2.0_scaffold56G20036 Striga asiatica HOM05D003283 ORTHO05D004037 4.3e-15 85.9 123 45.5
arahy.Tifrunner.gnm1.ann1.I6X9WR Arachis hypogaea HOM05D003283 ORTHO05D004037 5.6e-15 85.5 119 44.5
SalBow5G0915 Salvia bowleyana HOM05D003283 ORTHO05D004037 9.6e-15 84.7 123 44.7
SalBow5G1222 Salvia bowleyana HOM05D003283 ORTHO05D004037 9.6e-15 84.7 123 44.7
arahy.Tifrunner.gnm1.ann1.TFBQ7Q Arachis hypogaea HOM05D003283 ORTHO05D004037 1.3e-14 84.3 121 44.6
Psat3g142840 Pisum sativum HOM05D003283 ORTHO05D004037 1.3e-14 84.3 130 40.0
THA.LOC104821426 Tarenaya hassleriana HOM05D003283 ORTHO05D004037 1.3e-14 84.3 129 41.9
VMungo1383G2254 Vigna mungo HOM05D003283 ORTHO05D004037 1.3e-14 84.3 126 43.7
BcaB01g00886 Brassica carinata HOM05D003283 ORTHO05D004037 1.6e-14 84.0 125 41.6
Glyma.18G175500 Glycine max HOM05D003283 ORTHO05D004037 1.6e-14 84.0 128 41.4
Medtr7g059230 Medicago truncatula HOM05D003283 ORTHO05D004037 1.6e-14 84.0 130 40.8
Ah.05g177110 Amaranthus hybridus HOM05D003283 ORTHO05D004037 2.1e-14 83.6 124 41.9
Glyma.08G357000 Glycine max HOM05D003283 ORTHO05D004037 2.1e-14 83.6 127 44.1
Phvul.008G122500 Phaseolus vulgaris HOM05D003283 ORTHO05D004037 2.8e-14 83.2 133 40.6
Sc06g0000940 Simmondsia chinensis HOM05D003283 ORTHO05D004037 2.8e-14 83.2 129 40.3
Oeu037298.1 Olea europaea HOM05D003283 ORTHO05D004037 4.8e-14 82.4 125 43.2
CAN.G1305.11 Capsicum annuum HOM05D003283 ORTHO05D004037 6.2e-14 82.0 122 41.0
Hund17610 Selenicereus undatus HOM05D003283 ORTHO05D018541 8.1e-14 81.6 127 41.7
MSTRG.11392 Avicennia marina HOM05D003283 ORTHO05D004037 2.4e-13 80.1 123 44.7
Ca_22682_v3 Cicer arietinum L. HOM05D003283 ORTHO05D004037 2.4e-13 80.1 137 38.0
Migut.I00154 Erythranthe guttata HOM05D003283 ORTHO05D004037 2.4e-13 80.1 126 41.3
ATR0564G097 Amborella trichopoda HOM05D003283 ORTHO05D004037 3.1e-13 79.7 127 37.0
MBI13_g10955_MAGBIO Magnolia biondii HOM05D003283 ORTHO05D004037 6.9e-13 78.6 122 38.5
Lj1g0007970 Lotus japonicus HOM05D003283 ORTHO05D004037 9.0e-13 78.2 130 38.5
TPR.G23258 Trifolium pratense HOM05D003283 ORTHO05D004037 2.0e-12 77.0 137 37.2
Nn2g14585 Nelumbo nucifera HOM05D003283 ORTHO05D004037 4.5e-12 75.9 124 37.9
EL10Ac1g00662 Beta vulgaris HOM05D003283 ORTHO05D004037 1.7e-11 73.9 122 37.7
ATR1096G042 Amborella trichopoda HOM05D003283 ORTHO05D004037 2.9e-11 73.2 140 33.6
HPP92_016457 Vanilla planifolia HOM05D003283 ORTHO05D004037 3.8e-11 72.8 108 40.7
AUR62014508 Chenopodium quinoa HOM05D003283 ORTHO05D004037 4.9e-11 72.4 123 39.8
CDE04G2066 Ceratophyllum demersum HOM05D003283 ORTHO05D004037 1.4e-10 70.9 123 38.2
SEGI_31827 Sequoiadendron giganteum HOM05D003283 ORTHO05D004037 2.4e-10 70.1 121 34.7
Cc04_g17070 Coffea canephora HOM05D003283 ORTHO05D004037 7.1e-10 68.6 123 39.8
Gorai.008G191900 Gossypium raimondii HOM05D003283 ORTHO05D004037 7.1e-10 68.6 168 32.7
Zm00001eb254910 Zea mays HOM05D003283 ORTHO05D004037 2.1e-09 67.0 124 35.5
AUR62038027 Chenopodium quinoa HOM05D003283 ORTHO05D004037 1.0e-08 64.7 124 36.3
PGR119G1935 Punica granatum HOM05D003283 ORTHO05D004037 1.0e-08 64.7 119 37.0
ECA234G4349 Erigeron canadensis HOM05D003283 ORTHO05D004037 2.3e-08 63.5 77 49.4
Eucgr.J00653 Eucalyptus grandis HOM05D003283 ORTHO05D004037 5.1e-08 62.4 123 35.8
TAR636G0110 Trochodendron aralioides HOM05D003283 ORTHO05D004037 2.5e-07 60.1 124 33.9
unitig_46.g18384 Utricularia gibba HOM05D003283 ORTHO05D004037 3.3e-07 59.7 123 39.0
Os02g0748100 Oryza sativa ssp. japonica HOM05D003283 ORTHO05D004037 4.3e-07 59.3 123 35.8
Prupe.5G020200 Prunus persica HOM05D003283 ORTHO05D004037 3.6e-06 56.2 124 31.5
CANSAT21G2413 Cannabis sativa HOM05D003283 ORTHO05D004037 8.1e-06 55.1 151 29.8


User provided reference genes

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