Gene: COL.COLO4_08427

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_08427
  • Transcript Identifier COL.rna7229
  • Gene Type Coding gene
  • Location AWUE01013759.1 : 19993-24577 : negative

Gene Family Information

  • ID HOM05D003283
  • #Genes/#Species 208/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna7229
  • GenBank OMP05965.1
  • id gene8399
  • gene_name COLO4_08427
  • uniprot A0A1R3KFV9

Descriptions

  • Description RINT-1 / TIP-1 family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060628
IEA
GOA Databaseregulation of ER to Golgi vesicle-mediated transport
GO:0060628
IEA
InterProregulation of ER to Golgi vesicle-mediated transport
GO:0006890
IEA
GOA Databaseretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006890
IEA
InterProretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006888
ISO
PLAZA Integrative Orthologyendoplasmic reticulum to Golgi vesicle-mediated transport AT3G47700
GO:0006623
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole AT3G47700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G47700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070939
IEA
GOA DatabaseDsl1/NZR complex
GO:0070939
IEA
InterProDsl1/NZR complex
GO:0042406
ISO
PLAZA Integrative Orthologyextrinsic component of endoplasmic reticulum membrane AT3G47700
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G47700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042044 EXOC6/PINT-1/Sec15/Tip20, C-terminal, domain 2
IPR007528 RINT-1/Tip20
Mapman id Description
22.2.3.2.1 Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.DSL1 tethering complex.component MAG2