Gene: Solyc03g113000.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g113000.3
- Transcript Identifier Solyc03g113000.3.1
- Gene Type Coding gene
- Location SL4.0ch03 : 57730491-57736792 : negative
Gene Family Information
- ID HOM05D003283
- #Genes/#Species 208/98
- Phylogenetic origin
- ID ORTHO05D004037
- #Genes/#Species 193/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc03g113000.3.1
- uniprot A0A3Q7FQI2
- gene_id Solyc03g113000
Descriptions
- Description RINT1-like protein MAG2 (AHRD V3.3 *** A0A2G2X8L8_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0060628 | IBA IEA | GOA Database | regulation of ER to Golgi vesicle-mediated transport | |
| GO:0060628 | IEA | InterPro | regulation of ER to Golgi vesicle-mediated transport | |
| GO:0006623 | ISO | PLAZA Integrative Orthology | protein targeting to vacuole | AT3G47700 |
| GO:0006888 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum to Golgi vesicle-mediated transport | AT3G47700 |
| GO:0006890 | IBA IEA | GOA Database | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0006890 | IEA | InterPro | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G47700 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030134 | ISO | PLAZA Integrative Orthology | COPII-coated ER to Golgi transport vesicle | AT1G08400 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT1G08400 |
| GO:0030142 | ISO | PLAZA Integrative Orthology | COPI-coated Golgi to ER transport vesicle | AT1G08400 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G47700 |
| GO:0042406 | ISO | PLAZA Integrative Orthology | extrinsic component of endoplasmic reticulum membrane | AT3G47700 |
| GO:0070939 | IBA IEA | GOA Database | Dsl1/NZR complex | |
| GO:0070939 | IEA | InterPro | Dsl1/NZR complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.2.3.2.1 | Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.DSL1 tethering complex.component MAG2 |