Gene: arahy.Tifrunner.gnm1.ann1.N5P3C8

General Information

Structural Information

  • Species Arachis hypogaea
  • Gene Identifier arahy.Tifrunner.gnm1.ann1.N5P3C8
  • Transcript Identifier arahy.Tifrunner.gnm1.ann1.N5P3C8.1
  • Gene Type Coding gene
  • Location arahy.Tifrunner.gnm1.Arahy.15 : 2380129-2382910 : negative

Gene Family Information

  • ID HOM05D003283
  • #Genes/#Species 208/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id arahy.Tifrunner.gnm1.ann1.N5P3C8.v1.0
  • pacid 42635020

Descriptions

  • Description PTHR13520//PTHR13520:SF1 - RAD50-INTERACTING PROTEIN 1 PROTEIN RINT-1 // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006890
IEA
InterProretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0060628
IEA
InterProregulation of ER to Golgi vesicle-mediated transport
GO:0006888
ISO
PLAZA Integrative Orthologyendoplasmic reticulum to Golgi vesicle-mediated transport AT3G47700
GO:0006623
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole AT3G47700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G47700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070939
IEA
InterProDsl1/NZR complex
GO:0042406
ISO
PLAZA Integrative Orthologyextrinsic component of endoplasmic reticulum membrane AT3G47700
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G47700
GO:0030142
ISO
PLAZA Integrative OrthologyCOPI-coated Golgi to ER transport vesicle AT1G08400
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G08400
GO:0030134
ISO
PLAZA Integrative OrthologyCOPII-coated ER to Golgi transport vesicle AT1G08400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042044 EXOC6/PINT-1/Sec15/Tip20, C-terminal, domain 2
IPR007528 RINT-1/Tip20
Mapman id Description
22.2.3.2.1 Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.DSL1 tethering complex.component MAG2