Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17076 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 0.0e+00 1118.2 573 100.0
vmacro03340 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 3.3e-309 1064.3 589 94.1
Rhsim05G0001900 Rhododendron simsii HOM05D004857 ORTHO05D005663 2.1e-303 1045.0 573 93.2
Actinidia39614 Actinidia chinensis HOM05D004857 ORTHO05D005663 4.8e-276 954.1 577 85.8
CSS0030162 Camellia sinensis var. sinensis HOM05D004857 ORTHO05D005663 5.3e-275 950.7 574 85.5
Dinv44702 Davidia involucrata HOM05D004857 ORTHO05D005663 1.1e-272 943.0 574 84.3
GSVIVG01015011001 Vitis vinifera HOM05D004857 ORTHO05D005663 5.7e-261 904.0 574 81.0
TAR383G0334 Trochodendron aralioides HOM05D004857 ORTHO05D005663 3.1e-259 898.3 574 81.5
Thecc.09G070000 Theobroma cacao HOM05D004857 ORTHO05D005663 1.8e-254 882.5 572 79.2
Lj4A920T60 Lonicera japonica HOM05D004857 ORTHO05D005663 2.3e-254 882.1 581 80.0
Nn7g37725 Nelumbo nucifera HOM05D004857 ORTHO05D005663 2.3e-254 882.1 572 79.4
Manes.16G090200 Manihot esculenta HOM05D004857 ORTHO05D005663 6.7e-254 880.6 574 80.1
MBI19_g37995_MAGBIO Magnolia biondii HOM05D004857 ORTHO05D005663 9.7e-253 876.7 571 78.1
Actinidia30259 Actinidia chinensis HOM05D004857 ORTHO05D005663 2.2e-252 875.5 531 86.1
Phvul.009G223400 Phaseolus vulgaris HOM05D004857 ORTHO05D005663 1.2e-250 869.8 572 79.2
Cfa002936 Carpinus fangiana HOM05D004857 ORTHO05D005663 2.6e-250 868.6 578 77.5
QL11p002992 Quercus lobata HOM05D004857 ORTHO05D005663 3.4e-250 868.2 571 78.6
Gohir.A05G036200 Gossypium hirsutum HOM05D004857 ORTHO05D005663 1.0e-249 866.7 572 77.3
VMungo1309G0172 Vigna mungo HOM05D004857 ORTHO05D005663 2.9e-249 865.1 572 78.8
Gorai.009G038200 Gossypium raimondii HOM05D004857 ORTHO05D005663 3.8e-249 864.8 572 77.1
CiPaw.03G200100 Carya illinoinensis HOM05D004857 ORTHO05D005663 1.4e-248 862.8 558 79.9
Cc06_g12730 Coffea canephora HOM05D004857 ORTHO05D005663 3.2e-248 861.7 572 77.4
Gohir.D05G037700 Gossypium hirsutum HOM05D004857 ORTHO05D005663 4.2e-248 861.3 572 76.9
Duzib168G0723 Durio zibethinus HOM05D004857 ORTHO05D005663 2.1e-247 859.0 572 78.1
Sabra18G0057000 Salix brachista HOM05D004857 ORTHO05D005663 7.9e-247 857.1 574 77.2
Glyma.15G183100 Glycine max HOM05D004857 ORTHO05D005663 1.8e-246 855.9 572 76.9
Eucgr.C00765 Eucalyptus grandis HOM05D004857 ORTHO05D005663 2.3e-246 855.5 576 77.8
Lj6g0010651 Lotus japonicus HOM05D004857 ORTHO05D005663 2.3e-246 855.5 566 78.8
MD15G1223900 Malus domestica HOM05D004857 ORTHO05D005663 5.2e-246 854.4 577 76.8
Nitab4.5_0001114g0050 Nicotiana tabacum HOM05D004857 ORTHO05D005663 6.7e-246 854.0 574 78.7
Aqoxy6G02713 Aquilegia oxysepala HOM05D004857 ORTHO05D005663 5.7e-245 850.9 573 76.1
Ciclev10007866m.g Citrus clementina HOM05D004857 ORTHO05D005663 5.7e-245 850.9 575 77.2
Nitab4.5_0002665g0010 Nicotiana tabacum HOM05D004857 ORTHO05D005663 5.7e-245 850.9 574 78.4
Ca_02281_v3 Cicer arietinum L. HOM05D004857 ORTHO05D005663 7.4e-245 850.5 573 76.8
Lalb_Chr08g0232851 Lupinus albus HOM05D004857 ORTHO05D005663 8.2e-244 847.0 572 76.9
Potri.018G064100 Populus trichocarpa HOM05D004857 ORTHO05D005663 8.2e-244 847.0 572 76.6
Duzib187G1561 Durio zibethinus HOM05D004857 ORTHO05D005663 3.1e-243 845.1 572 75.9
MSTRG.19426 Avicennia marina HOM05D004857 ORTHO05D005663 5.3e-243 844.3 574 77.4
CANSAT56G1105 Cannabis sativa HOM05D004857 ORTHO05D005663 5.3e-243 844.3 577 75.9
COL.COLO4_21204 Corchorus olitorius HOM05D004857 ORTHO05D005663 5.3e-243 844.3 593 74.9
Glyma.09G074100 Glycine max HOM05D004857 ORTHO05D005663 2.6e-242 842.0 572 76.9
MD02G1102700 Malus domestica HOM05D004857 ORTHO05D005663 3.5e-242 841.6 578 76.0
arahy.Tifrunner.gnm1.ann1.N970BB Arachis hypogaea HOM05D004857 ORTHO05D005663 5.9e-242 840.9 585 75.9
CDE05G0310 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 5.9e-242 840.9 574 75.8
Psat1g138640 Pisum sativum HOM05D004857 ORTHO05D005663 1.3e-241 839.7 573 76.4
PGR142G2122 Punica granatum HOM05D004857 ORTHO05D005663 1.3e-241 839.7 576 75.9
MELO3C009580.2 Cucumis melo HOM05D004857 ORTHO05D005663 1.7e-241 839.3 574 77.2
SalBow6G1194 Salvia bowleyana HOM05D004857 ORTHO05D005663 1.7e-241 839.3 575 77.2
arahy.Tifrunner.gnm1.ann1.N9ATPP Arachis hypogaea HOM05D004857 ORTHO05D005663 2.2e-241 839.0 585 75.7
Oeu041809.2 Olea europaea HOM05D004857 ORTHO05D005663 1.5e-240 836.3 637 70.3
CsaV3_3G038370 Cucumis sativus L. HOM05D004857 ORTHO05D005663 3.6e-239 831.6 577 76.8
TWI34G1843 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 6.1e-239 830.9 576 76.2
Sed0019967 Sechium edule HOM05D004857 ORTHO05D005663 8.0e-239 830.5 573 76.8
Hund21824 Selenicereus undatus HOM05D004857 ORTHO05D005663 1.8e-238 829.3 565 77.5
PGSC0003DMG401015931 Solanum tuberosum HOM05D004857 ORTHO05D005663 2.3e-238 828.9 575 76.9
CAN.G457.2 Capsicum annuum HOM05D004857 ORTHO05D005663 5.2e-238 827.8 574 76.1
Sopen07g006280 Solanum pennellii HOM05D004857 ORTHO05D005663 5.2e-238 827.8 575 76.2
Medtr2g044200 Medicago truncatula HOM05D004857 ORTHO05D005663 6.7e-238 827.4 578 76.3
Sc08g0005030 Simmondsia chinensis HOM05D004857 ORTHO05D005663 8.8e-238 827.0 566 76.9
Solyc07g017490.3 Solanum lycopersicum HOM05D004857 ORTHO05D005663 1.5e-237 826.2 575 76.0
RcHm_v2.0_Chr2g0095991 Rosa chinensis HOM05D004857 ORTHO05D005663 1.8e-235 819.3 575 73.9
TWI32G0792 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 5.9e-234 814.3 579 74.3
Migut.J00878 Erythranthe guttata HOM05D004857 ORTHO05D005663 1.9e-232 809.3 553 76.5
FvH4_1g09440 Fragaria vesca HOM05D004857 ORTHO05D005663 1.9e-232 809.3 575 72.7
ATR0681G246 Amborella trichopoda HOM05D004857 ORTHO05D005663 6.1e-231 804.3 575 72.5
FAN19G2563 Fragaria x ananassa HOM05D004857 ORTHO05D005663 8.0e-231 803.9 577 72.4
Lsat_1_v5_gn_5_138760 Lactuca sativa HOM05D004857 ORTHO05D005663 8.0e-231 803.9 569 75.0
FAN26G0201 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.0e-230 803.5 577 72.4
FAN28G2840 Fragaria x ananassa HOM05D004857 ORTHO05D005663 6.8e-230 800.8 577 72.1
Oeu000275.2 Olea europaea HOM05D004857 ORTHO05D005663 2.6e-229 798.9 740 61.1
FAN23G0125 Fragaria x ananassa HOM05D004857 ORTHO05D005663 5.7e-229 797.7 577 71.9
THA.LOC104819454 Tarenaya hassleriana HOM05D004857 ORTHO05D005663 6.3e-228 794.3 575 72.9
ClCG10G017920 Citrullus lanatus HOM05D004857 ORTHO05D005663 2.7e-226 788.9 678 65.6
FAN26G1404 Fragaria x ananassa HOM05D004857 ORTHO05D005663 2.7e-226 788.9 604 69.2
CDE05G0890 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 5.9e-226 787.7 563 73.4
EL10Ac4g09573 Beta vulgaris HOM05D004857 ORTHO05D005663 2.9e-225 785.4 582 72.0
PSO104G0255 Papaver somniferum HOM05D004857 ORTHO05D005663 6.1e-223 777.7 580 71.6
DCAR_024780 Daucus carota HOM05D004857 ORTHO05D005663 1.4e-222 776.5 585 71.6
HPP92_017869 Vanilla planifolia HOM05D004857 ORTHO05D005663 1.5e-221 773.1 566 72.3
AUR62006828 Chenopodium quinoa HOM05D004857 ORTHO05D005663 8.3e-220 767.3 565 72.2
arahy.Tifrunner.gnm1.ann1.I7JLU4 Arachis hypogaea HOM05D004857 ORTHO05D005663 5.4e-219 764.6 585 72.0
PSO421G0319 Papaver somniferum HOM05D004857 ORTHO05D005663 1.3e-217 760.0 590 70.2
Prupe.7G191600 Prunus persica HOM05D004857 ORTHO05D005663 2.3e-217 759.2 518 77.0
Sp4g07340 Schrenkiella parvula HOM05D004857 ORTHO05D005663 5.0e-217 758.1 562 70.8
Aa31LG5G9410 Aethionema arabicum HOM05D004857 ORTHO05D005663 1.1e-216 756.9 586 67.9
SHI27983 Sapria himalayana HOM05D004857 ORTHO05D005663 1.9e-216 756.1 591 69.2
Zm00001eb405000 Zea mays HOM05D004857 ORTHO05D005663 2.5e-216 755.7 570 70.4
Os11g0146700 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 5.6e-216 754.6 551 71.5
HanXRQChr12g0355141 Helianthus annuus HOM05D004857 ORTHO05D005663 6.1e-215 751.1 579 72.2
Carub.0004s0646 Capsella rubella HOM05D004857 ORTHO05D005663 1.8e-214 749.6 557 72.4
Thhalv10001246m.g Eutrema salsugineum HOM05D004857 ORTHO05D005663 3.0e-214 748.8 563 70.3
BcaC07g40818 Brassica carinata HOM05D004857 ORTHO05D005663 7.5e-213 744.2 570 70.5
C08p38110 Brassica napus HOM05D004857 ORTHO05D005663 7.5e-213 744.2 570 70.5
BolC8t51386H Brassica oleracea HOM05D004857 ORTHO05D005663 7.5e-213 744.2 570 70.5
SGA_v2.0_scaffold31G12698 Striga asiatica HOM05D004857 ORTHO05D005663 9.8e-213 743.8 508 76.4
AT2G26460 Arabidopsis thaliana HOM05D004857 ORTHO05D005663 1.4e-211 740.0 564 68.4
A09p55180 Brassica napus HOM05D004857 ORTHO05D005663 7.0e-211 737.6 570 69.6
AUR62000486 Chenopodium quinoa HOM05D004857 ORTHO05D005663 9.2e-211 737.3 557 70.6
BraA09t40926Z Brassica rapa HOM05D004857 ORTHO05D005663 4.6e-210 734.9 570 69.5
AL4G19270 Arabidopsis lyrata HOM05D004857 ORTHO05D005663 1.0e-209 733.8 557 69.7
TPR.G27074 Trifolium pratense HOM05D004857 ORTHO05D005663 2.1e-207 726.1 501 74.5
BcaB08g35315 Brassica carinata HOM05D004857 ORTHO05D005663 4.7e-207 724.9 581 67.0
CARHR114530 Cardamine hirsuta HOM05D004857 ORTHO05D005663 8.1e-199 697.6 561 67.0
Peaxi162Scf01184g10017 Petunia axillaris HOM05D004857 ORTHO05D005663 1.2e-197 693.7 578 67.8
SEGI_40202 Sequoiadendron giganteum HOM05D004857 ORTHO05D005663 6.0e-194 681.4 570 65.4
Os12g0143400 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 8.6e-193 677.6 571 65.7
Zm00001eb163350 Zea mays HOM05D004857 ORTHO05D005663 6.6e-185 651.4 491 69.9
Haze_26072 Corylus avellana HOM05D004857 ORTHO05D005663 3.4e-181 639.0 420 77.1
Mapoly0117s0005 Marchantia polymorpha HOM05D004857 ORTHO05D005663 8.1e-175 617.8 588 59.4
Cpa.g.sc82.61 Carica papaya HOM05D004857 ORTHO05D005663 3.2e-147 526.2 385 72.5
CBR_g41264 Chara braunii HOM05D004857 ORTHO05D005663 9.7e-144 514.6 596 52.2
SMO266G0005 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 7.7e-141 505.0 612 51.5
BcaB08g35309 Brassica carinata HOM05D004857 ORTHO05D005663 1.0e-140 504.6 502 58.0
BcaB08g35312 Brassica carinata HOM05D004857 ORTHO05D005663 1.0e-140 504.6 502 58.0
BcaB08g35314 Brassica carinata HOM05D004857 ORTHO05D005663 1.0e-140 504.6 502 58.0
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis HOM05D004857 ORTHO05D005663 2.4e-126 456.8 479 54.9
ECA234G2807 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.5e-125 453.0 352 69.3
Atru.chr7.1770 Acer truncatum HOM05D004857 ORTHO05D005663 7.0e-118 428.7 263 81.0
ECA234G1433 Erigeron canadensis HOM05D000959 ORTHO05D000775 7.5e-88 328.9 244 72.1
BcaB08g35308 Brassica carinata HOM05D004857 ORTHO05D005663 9.8e-88 328.6 249 71.9
Lsat_1_v5_gn_7_48600 Lactuca sativa HOM05D004857 ORTHO05D005663 3.0e-84 317.0 195 80.5
HanXRQChr12g0354251 Helianthus annuus HOM05D004857 ORTHO05D005663 7.5e-80 302.4 556 41.5
Pp3c19_4680 Physcomitrium patens HOM05D004857 ORTHO05D005663 3.7e-79 300.1 359 50.4
unitig_699.g19261 Utricularia gibba HOM05D004857 ORTHO05D005663 9.2e-78 295.4 342 55.0
arahy.Tifrunner.gnm1.ann1.97VZCN Arachis hypogaea HOM05D004857 ORTHO05D005663 2.5e-75 287.3 163 85.9
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 2.1e-74 284.3 164 87.2
Cpa.g.sc3709.1 Carica papaya HOM05D004857 ORTHO05D005663 1.4e-70 271.6 157 87.3
BcaB08g35313 Brassica carinata HOM05D004857 ORTHO05D005663 1.1e-67 261.9 273 54.9
HanXRQChr12g0355211 Helianthus annuus HOM05D004857 ORTHO05D005663 1.1e-65 255.4 424 40.8
Nn2g14232 Nelumbo nucifera HOM05D004857 ORTHO05D005663 3.1e-65 253.8 194 68.6
Atru.chr7.1769 Acer truncatum HOM05D004857 ORTHO05D005663 3.3e-59 233.8 170 74.1
TAR626G1635 Trochodendron aralioides HOM05D001862 ORTHO05D005663 2.1e-53 214.5 438 34.7
SMO270G0035 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 1.8e-52 211.5 423 40.4
SMO270G0044 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 1.4e-49 201.8 134 73.1
Lsat_1_v5_gn_5_77280 Lactuca sativa HOM05D004857 ORTHO05D005663 2.1e-45 188.0 175 64.0
Lsat_1_v5_gn_5_77300 Lactuca sativa HOM05D004857 ORTHO05D005663 6.7e-44 183.0 114 78.9
CAN.G457.3 Capsicum annuum HOM05D004857 ORTHO05D005663 1.1e-43 182.2 121 81.0
Cre16.g688750 Chlamydomonas reinhardtii HOM05D004857 ORTHO05D005663 1.2e-40 172.2 584 31.0
Lsat_1_v5_gn_7_48580 Lactuca sativa HOM05D004857 ORTHO05D005663 9.3e-38 162.5 228 48.7
Lsat_1_v5_gn_3_37601 Lactuca sativa HOM05D004857 ORTHO05D005663 9.7e-35 152.5 159 60.4
Dinv32013 Davidia involucrata HOM05D004857 ORTHO05D005663 2.7e-29 134.4 76 88.2
BcaB08g35310 Brassica carinata HOM05D004857 ORTHO05D005663 4.3e-27 127.1 151 50.3
QL05p089308 Quercus lobata HOM05D004857 ORTHO05D005663 5.0e-23 113.6 75 74.7
Rhsim09G0048200 Rhododendron simsii HOM05D004857 ORTHO05D005663 8.5e-23 112.8 124 57.3
TPR.G21223 Trifolium pratense HOM05D004857 ORTHO05D005663 4.2e-22 110.5 58 93.1
MCO14G054 Micromonas commoda HOM05D004857 ORTHO05D005663 5.1e-20 103.6 181 37.6
Lsat_1_v5_gn_7_64781 Lactuca sativa HOM05D004857 ORTHO05D005663 3.3e-19 100.9 76 67.1
CAN.G1728.2 Capsicum annuum HOM05D004857 ORTHO05D005663 5.7e-19 100.1 69 72.5
Actinidia02202 Actinidia chinensis HOM05D004857 ORTHO05D005663 2.2e-18 98.2 66 77.3
TAR626G1095 Trochodendron aralioides HOM05D004857 ORTHO05D005663 8.2e-18 96.3 70 75.7
vmacro05712 Vaccinium macrocarpon HOM05D006033 ORTHO05D005663 5.9e-16 90.1 49 93.9
BcaB08g35311 Brassica carinata HOM05D004857 ORTHO05D005663 7.7e-16 89.7 148 39.2
ECA247G2383 Erigeron canadensis HOM05D004857 ORTHO05D005663 1.3e-15 89.0 86 53.5
PSO832G3983 Papaver somniferum HOM05D004857 ORTHO05D005663 1.6e-13 82.0 87 48.3
Actinidia27556 Actinidia chinensis HOM05D004857 ORTHO05D005663 1.0e-12 79.3 57 73.7
vmacro12720 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.0e-12 79.3 64 70.3
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 2.6e-08 64.7 36 80.6
PSO407G0399 Papaver somniferum HOM05D001929 ORTHO05D002426 3.5e-08 64.3 53 56.6
PSO541G5242 Papaver somniferum HOM05D004857 ORTHO05D005663 1.3e-07 62.4 53 54.7


User provided reference genes

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