Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16300 Vaccinium macrocarpon HOM05D001007 ORTHO05D008005 4.3e-71 271.2 133 100.0
Rhsim12G0126700 Rhododendron simsii HOM05D001007 ORTHO05D008005 3.1e-53 211.8 116 88.8
Actinidia14986 Actinidia chinensis HOM05D001007 ORTHO05D008005 3.6e-49 198.4 123 78.0
Sc14g0008490 Simmondsia chinensis HOM05D001007 ORTHO05D008005 4.7e-49 198.0 121 78.5
QL03p067425 Quercus lobata HOM05D001007 ORTHO05D008005 6.1e-49 197.6 122 77.9
CSS0010380 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D008005 1.4e-48 196.4 123 76.4
CSS0012238 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D008005 1.4e-48 196.4 123 76.4
Actinidia24656 Actinidia chinensis HOM05D001007 ORTHO05D008005 5.1e-48 194.5 117 78.6
GSVIVG01020137001 Vitis vinifera HOM05D001007 ORTHO05D008005 1.1e-47 193.4 123 77.2
CsaV3_5G025450 Cucumis sativus L. HOM05D001007 ORTHO05D008005 1.5e-47 193.0 116 80.2
EL10Ac6g13095 Beta vulgaris HOM05D001007 ORTHO05D008005 2.0e-47 192.6 121 76.0
Aa31LG4G10810 Aethionema arabicum HOM05D001007 ORTHO05D008005 4.4e-47 191.4 123 73.2
ECA246G0840 Erigeron canadensis HOM05D001007 ORTHO05D008005 4.4e-47 191.4 116 77.6
ClCG09G022160 Citrullus lanatus HOM05D001007 ORTHO05D008005 5.7e-47 191.0 116 78.4
Lsat_1_v5_gn_3_49280 Lactuca sativa HOM05D001007 ORTHO05D008005 5.7e-47 191.0 112 79.5
AUR62026327 Chenopodium quinoa HOM05D001007 ORTHO05D008005 1.7e-46 189.5 123 75.6
AUR62026525 Chenopodium quinoa HOM05D001007 ORTHO05D008005 2.2e-46 189.1 123 75.6
MELO3C002934.2 Cucumis melo HOM05D001007 ORTHO05D008005 2.2e-46 189.1 116 77.6
Oeu044532.1 Olea europaea HOM05D001007 ORTHO05D008005 2.8e-46 188.7 119 73.9
Prupe.1G262200 Prunus persica HOM05D001007 ORTHO05D008005 2.8e-46 188.7 123 73.2
Cfa009084 Carpinus fangiana HOM05D001007 ORTHO05D008005 3.7e-46 188.3 123 74.8
Nn4g22952 Nelumbo nucifera HOM05D001007 ORTHO05D008005 3.7e-46 188.3 123 75.6
RcHm_v2.0_Chr4g0444891 Rosa chinensis HOM05D001007 ORTHO05D008005 8.2e-46 187.2 123 73.2
TWI36G1227 Tripterygium wilfordii HOM05D001007 ORTHO05D008005 1.1e-45 186.8 116 75.0
CiPaw.05G144400 Carya illinoinensis HOM05D001007 ORTHO05D008005 1.4e-45 186.4 123 72.4
Haze_12116 Corylus avellana HOM05D001007 ORTHO05D008005 1.4e-45 186.4 123 73.2
Atru.chr11.1926 Acer truncatum HOM05D001007 ORTHO05D008005 2.4e-45 185.7 116 75.0
BcaB03g14784 Brassica carinata HOM05D001007 ORTHO05D008005 2.4e-45 185.7 123 71.5
Peaxi162Scf00828g00118 Petunia axillaris HOM05D001007 ORTHO05D008005 2.4e-45 185.7 115 75.7
BcaC08g46456 Brassica carinata HOM05D001007 ORTHO05D008005 3.1e-45 185.3 123 70.7
A07p36480 Brassica napus HOM05D001007 ORTHO05D008005 3.1e-45 185.3 123 70.7
BraA07t31219Z Brassica rapa HOM05D001007 ORTHO05D008005 3.1e-45 185.3 123 70.7
Thhalv10018027m.g Eutrema salsugineum HOM05D001007 ORTHO05D008005 3.1e-45 185.3 123 70.7
FAN17G1611 Fragaria x ananassa HOM05D001007 ORTHO05D008005 3.1e-45 185.3 123 72.4
Sed0006819 Sechium edule HOM05D001007 ORTHO05D008005 3.1e-45 185.3 116 75.9
C06p43940 Brassica napus HOM05D001007 ORTHO05D008005 4.1e-45 184.9 123 70.7
BolC6t39466H Brassica oleracea HOM05D001007 ORTHO05D008005 4.1e-45 184.9 123 70.7
Gohir.D05G322000 Gossypium hirsutum HOM05D001007 ORTHO05D008005 4.1e-45 184.9 116 74.1
Cpa.g.sc5.319 Carica papaya HOM05D001007 ORTHO05D008005 7.0e-45 184.1 116 75.9
Eucgr.B03380 Eucalyptus grandis HOM05D001007 ORTHO05D008005 7.0e-45 184.1 123 70.7
Medtr5g036660 Medicago truncatula HOM05D001007 ORTHO05D008005 7.0e-45 184.1 123 71.5
MSTRG.647 Avicennia marina HOM05D001007 ORTHO05D008005 9.1e-45 183.7 123 72.4
FvH4_4g35290 Fragaria vesca HOM05D001007 ORTHO05D008005 9.1e-45 183.7 123 71.5
FAN22G1767 Fragaria x ananassa HOM05D001007 ORTHO05D008005 9.1e-45 183.7 123 71.5
MD16G1083800 Malus domestica HOM05D001007 ORTHO05D008005 9.1e-45 183.7 123 71.5
Sp5g25190 Schrenkiella parvula HOM05D001007 ORTHO05D008005 9.1e-45 183.7 123 70.7
VMungo1215G0407 Vigna mungo HOM05D001007 ORTHO05D008005 9.1e-45 183.7 123 73.2
Ciclev10030551m.g Citrus clementina HOM05D001007 ORTHO05D008005 1.2e-44 183.3 116 73.3
DCAR_007115 Daucus carota HOM05D001007 ORTHO05D008005 1.2e-44 183.3 123 69.9
TAR622G0260 Trochodendron aralioides HOM05D001007 ORTHO05D008005 1.2e-44 183.3 123 73.2
FAN12G3712 Fragaria x ananassa HOM05D001007 ORTHO05D008005 1.5e-44 183.0 123 70.7
Lj3A1046T50 Lonicera japonica HOM05D001007 ORTHO05D008005 1.5e-44 183.0 116 75.9
PSO591G0128 Papaver somniferum HOM05D001007 ORTHO05D008005 1.5e-44 183.0 121 71.9
PSO832G4178 Papaver somniferum HOM05D001007 ORTHO05D008005 1.5e-44 183.0 121 71.9
Phvul.002G077700 Phaseolus vulgaris HOM05D001007 ORTHO05D008005 1.5e-44 183.0 123 72.4
Hund25300 Selenicereus undatus HOM05D001007 ORTHO05D008005 1.5e-44 183.0 113 77.9
Sopen05g002480 Solanum pennellii HOM05D001007 ORTHO05D008005 1.5e-44 183.0 121 71.1
PGSC0003DMG400022635 Solanum tuberosum HOM05D001007 ORTHO05D008005 1.5e-44 183.0 121 71.1
Gorai.009G345500 Gossypium raimondii HOM05D001007 ORTHO05D008005 2.0e-44 182.6 116 73.3
Ca_26198_v3 Cicer arietinum L. HOM05D001007 ORTHO05D008005 2.6e-44 182.2 123 71.5
FAN07G0147 Fragaria x ananassa HOM05D001007 ORTHO05D008005 2.6e-44 182.2 123 70.7
Psat2g114320 Pisum sativum HOM05D001007 ORTHO05D008005 3.5e-44 181.8 116 74.1
PGR102G1282 Punica granatum HOM05D001007 ORTHO05D008005 3.5e-44 181.8 115 72.2
SGA_v2.0_scaffold166G38318 Striga asiatica HOM05D001007 ORTHO05D008005 3.5e-44 181.8 116 75.0
Cc11_g13990 Coffea canephora HOM05D001007 ORTHO05D008005 4.5e-44 181.4 123 73.2
Duzib251G0457 Durio zibethinus HOM05D001007 ORTHO05D008005 4.5e-44 181.4 116 73.3
Gohir.A05G319700 Gossypium hirsutum HOM05D001007 ORTHO05D008005 4.5e-44 181.4 116 73.3
SalBow2G0827 Salvia bowleyana HOM05D001007 ORTHO05D008005 4.5e-44 181.4 123 70.7
SalBow2G2106 Salvia bowleyana HOM05D001007 ORTHO05D008005 4.5e-44 181.4 123 70.7
Solyc05g006530.4 Solanum lycopersicum HOM05D001007 ORTHO05D008005 4.5e-44 181.4 121 71.1
TPR.G17327 Trifolium pratense HOM05D001007 ORTHO05D008005 7.7e-44 180.6 116 72.4
CAN.G549.5 Capsicum annuum HOM05D001007 ORTHO05D008005 1.0e-43 180.3 121 69.4
AT1G70070 Arabidopsis thaliana HOM05D001007 ORTHO05D008005 1.3e-43 179.9 123 68.3
Aqoxy3G03150 Aquilegia oxysepala HOM05D001007 ORTHO05D008005 1.7e-43 179.5 123 70.7
COL.COLO4_36274 Corchorus olitorius HOM05D001007 ORTHO05D008005 1.7e-43 179.5 116 71.6
Glyma.01G038100 Glycine max HOM05D001007 ORTHO05D008005 1.7e-43 179.5 116 73.3
Nitab4.5_0007178g0040 Nicotiana tabacum HOM05D001007 ORTHO05D008005 1.7e-43 179.5 121 71.9
Carub.0002s1674 Capsella rubella HOM05D001007 ORTHO05D008005 2.9e-43 178.7 123 68.3
AL2G29320 Arabidopsis lyrata HOM05D001007 ORTHO05D008005 3.8e-43 178.3 123 68.3
CARHR063170 Cardamine hirsuta HOM05D001007 ORTHO05D008005 3.8e-43 178.3 123 67.5
Lj2g0000675 Lotus japonicus HOM05D001007 ORTHO05D008005 3.8e-43 178.3 123 70.7
Potri.010G038500 Populus trichocarpa HOM05D001007 ORTHO05D008005 5.0e-43 177.9 116 72.4
Sabra10G0027700 Salix brachista HOM05D001007 ORTHO05D008005 5.0e-43 177.9 116 72.4
Lalb_Chr05g0217331 Lupinus albus HOM05D001007 ORTHO05D008005 6.5e-43 177.6 116 72.4
Migut.L01377 Erythranthe guttata HOM05D001007 ORTHO05D008005 8.5e-43 177.2 121 70.2
CDE11G0261 Ceratophyllum demersum HOM05D001007 ORTHO05D008005 1.4e-42 176.4 123 69.9
Thecc.02G238700 Theobroma cacao HOM05D001007 ORTHO05D008005 1.4e-42 176.4 116 70.7
THA.LOC104822069 Tarenaya hassleriana HOM05D001007 ORTHO05D008005 1.9e-42 176.0 116 72.4
CANSAT01G1265 Cannabis sativa HOM05D001007 ORTHO05D008005 2.5e-42 175.6 123 69.1
arahy.Tifrunner.gnm1.ann1.91JL5L Arachis hypogaea HOM05D001007 ORTHO05D008005 3.2e-42 175.3 121 71.1
arahy.Tifrunner.gnm1.ann1.CDW9W4 Arachis hypogaea HOM05D001007 ORTHO05D008005 3.2e-42 175.3 121 71.1
Nitab4.5_0001030g0130 Nicotiana tabacum HOM05D001007 ORTHO05D008005 5.5e-42 174.5 116 71.6
Os02g0739000 Oryza sativa ssp. japonica HOM05D001007 ORTHO05D008005 3.6e-41 171.8 121 70.2
Dinv24923 Davidia involucrata HOM05D001007 ORTHO05D008005 3.0e-40 168.7 110 75.5
unitig_22.g6484 Utricularia gibba HOM05D001007 ORTHO05D008005 5.2e-40 167.9 112 69.6
HPP92_010802 Vanilla planifolia HOM05D001007 ORTHO05D008005 8.8e-40 167.2 114 64.9
ATR1101G016 Amborella trichopoda HOM05D001007 ORTHO05D008005 2.6e-39 165.6 116 68.1
Zm00001eb254030 Zea mays HOM05D001007 ORTHO05D008005 3.3e-39 165.2 121 66.1
Manes.05G093300 Manihot esculenta HOM05D001007 ORTHO05D008005 1.4e-37 159.8 105 73.3
HanXRQChr15g0476051 Helianthus annuus HOM05D001007 ORTHO05D008005 4.4e-31 138.3 80 78.8
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 4.4e-31 138.3 116 56.9
Pp3c4_20390 Physcomitrium patens HOM05D001007 ORTHO05D008005 2.4e-29 132.5 118 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3608 Anthoceros agrestis HOM05D001007 ORTHO05D008005 4.1e-29 131.7 116 52.6
SEGI_16770 Sequoiadendron giganteum HOM05D001007 ORTHO05D008005 2.2e-27 125.9 104 61.5
SMO340G0093 Selaginella moellendorffii HOM05D001007 ORTHO05D008005 8.5e-27 124.0 113 53.1
Pp3c17_9310 Physcomitrium patens HOM05D001007 ORTHO05D008005 1.1e-26 123.6 118 51.7
SEGI_21456 Sequoiadendron giganteum HOM05D001007 ORTHO05D008005 3.6e-25 118.6 83 69.9
Pp3c13_6210 Physcomitrium patens HOM05D001007 ORTHO05D008005 1.3e-22 110.2 113 47.8
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 4.2e-18 95.1 89 49.4
Cre01.g027150 Chlamydomonas reinhardtii HOM05D001007 ORTHO05D008005 8.0e-17 90.9 113 44.2
PRCOL_00000255 Prasinoderma coloniale HOM05D001007 ORTHO05D008005 4.9e-14 81.6 110 39.1
MCO13G258 Micromonas commoda HOM05D001007 ORTHO05D008005 2.7e-12 75.9 112 33.9


User provided reference genes

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