Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16014 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 0.0e+00 1952.2 1012 100.0
Rhsim09G0071900 Rhododendron simsii HOM05D005906 ORTHO05D007359 2.6e-107 394.4 314 77.7
Lju1295A4T31 Lonicera japonica HOM05D005906 ORTHO05D007359 5.0e-95 353.6 314 69.7
CSS0007611 Camellia sinensis var. sinensis HOM05D005906 ORTHO05D007359 2.5e-94 351.3 314 70.7
Actinidia04315 Actinidia chinensis HOM05D005906 ORTHO05D007359 2.3e-92 344.7 314 68.8
Sopen04g003870 Solanum pennellii HOM05D005906 ORTHO05D007359 2.0e-91 341.7 323 63.2
Solyc04g008700.3 Solanum lycopersicum HOM05D005906 ORTHO05D007359 2.9e-90 337.8 323 62.5
CAN.G419.29 Capsicum annuum HOM05D005906 ORTHO05D007359 3.7e-90 337.4 323 61.9
HanXRQChr17g0540691 Helianthus annuus HOM05D005906 ORTHO05D007359 4.9e-90 337.0 323 64.7
PSO782G0435 Papaver somniferum HOM05D005906 ORTHO05D007359 2.7e-88 331.3 323 65.0
Dinv12052 Davidia involucrata HOM05D005906 ORTHO05D007359 4.6e-88 330.5 323 65.3
DCAR_006599 Daucus carota HOM05D005906 ORTHO05D007359 1.3e-87 328.9 323 61.9
Migut.N00351 Erythranthe guttata HOM05D005906 ORTHO05D007359 1.7e-87 328.6 314 63.7
PSO063G6838 Papaver somniferum HOM05D005906 ORTHO05D007359 1.1e-86 325.9 323 63.8
Nitab4.5_0001983g0010 Nicotiana tabacum HOM05D005906 ORTHO05D007359 1.9e-86 325.1 350 58.0
Peaxi162Scf00329g00515 Petunia axillaris HOM05D005906 ORTHO05D007359 5.6e-86 323.6 356 59.0
Aqoxy3G04280 Aquilegia oxysepala HOM05D005906 ORTHO05D007359 2.1e-85 321.6 323 62.5
Lsat_1_v5_gn_0_9300 Lactuca sativa HOM05D005906 ORTHO05D007359 1.1e-84 319.3 322 62.1
MBI03_g33918_MAGBIO Magnolia biondii HOM05D005906 ORTHO05D007359 1.1e-84 319.3 314 63.7
Sc10g0007040 Simmondsia chinensis HOM05D005906 ORTHO05D007359 1.1e-84 319.3 323 61.6
GSVIVG01010209001 Vitis vinifera HOM05D005906 ORTHO05D007359 1.4e-84 318.9 312 65.1
Nitab4.5_0000129g0240 Nicotiana tabacum HOM05D005906 ORTHO05D007359 5.2e-84 317.0 322 60.6
Thecc.02G295800 Theobroma cacao HOM05D005906 ORTHO05D007359 6.8e-84 316.6 314 64.0
Gohir.D01G138300 Gossypium hirsutum HOM05D005906 ORTHO05D007359 1.2e-83 315.8 314 64.3
Gorai.002G167700 Gossypium raimondii HOM05D005906 ORTHO05D007359 1.2e-83 315.8 314 64.3
Atru.chr11.1316 Acer truncatum HOM05D005906 ORTHO05D007359 2.0e-83 315.1 314 64.0
Duzib251G0270 Durio zibethinus HOM05D005906 ORTHO05D007359 7.6e-83 313.2 314 63.4
ECA246G1682 Erigeron canadensis HOM05D005906 ORTHO05D007359 1.3e-82 312.4 323 61.9
Nn3g18680 Nelumbo nucifera HOM05D005906 ORTHO05D007359 3.7e-82 310.8 323 62.2
SGA_v2.0_scaffold317G48430 Striga asiatica HOM05D005906 ORTHO05D007359 4.9e-82 310.5 314 61.5
Oeu022359.1 Olea europaea HOM05D005906 ORTHO05D007359 6.4e-82 310.1 314 64.3
TWI74G1493 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 6.4e-82 310.1 314 63.1
Medtr4g074440 Medicago truncatula HOM05D005906 ORTHO05D007359 1.4e-81 308.9 323 60.4
Prupe.1G345100 Prunus persica HOM05D005906 ORTHO05D007359 1.4e-81 308.9 323 62.2
RcHm_v2.0_Chr4g0446421 Rosa chinensis HOM05D005906 ORTHO05D007359 5.4e-81 307.0 323 62.2
Lj3g0019719 Lotus japonicus HOM05D005906 ORTHO05D007359 1.2e-80 305.8 323 60.7
Cfa008717 Carpinus fangiana HOM05D005906 ORTHO05D007359 1.6e-80 305.4 314 61.8
Ciclev10030612m.g Citrus clementina HOM05D005906 ORTHO05D007359 7.8e-80 303.1 314 63.1
Gohir.A01G145818 Gossypium hirsutum HOM05D005906 ORTHO05D007359 1.0e-79 302.8 314 63.1
CiPaw.05G166700 Carya illinoinensis HOM05D005906 ORTHO05D007359 1.3e-79 302.4 323 61.0
TAR371G1124 Trochodendron aralioides HOM05D005906 ORTHO05D007359 1.7e-79 302.0 339 58.7
VMungo1127G1981 Vigna mungo HOM05D005906 ORTHO05D007359 3.0e-79 301.2 337 58.2
Ca_03031_v3 Cicer arietinum L. HOM05D005906 ORTHO05D007359 5.1e-79 300.4 314 60.5
FAN17G1621 Fragaria x ananassa HOM05D005906 ORTHO05D007359 6.6e-79 300.1 323 61.9
Lalb_Chr01g0001511 Lupinus albus HOM05D005906 ORTHO05D007359 6.6e-79 300.1 323 59.4
Manes.03G080900 Manihot esculenta HOM05D005906 ORTHO05D007359 8.6e-79 299.7 314 60.5
MD16G1000200 Malus domestica HOM05D005906 ORTHO05D007359 1.5e-78 298.9 323 60.4
arahy.Tifrunner.gnm1.ann1.KE9NE3 Arachis hypogaea HOM05D005906 ORTHO05D007359 1.9e-78 298.5 336 57.4
FvH4_4g36700 Fragaria vesca HOM05D005906 ORTHO05D007359 3.3e-78 297.7 323 61.3
COL.COLO4_16625 Corchorus olitorius HOM05D005906 ORTHO05D007359 4.3e-78 297.4 314 55.4
Glyma.12G028100 Glycine max HOM05D005906 ORTHO05D007359 4.3e-78 297.4 323 59.4
Phvul.011G031500 Phaseolus vulgaris HOM05D005906 ORTHO05D007359 4.3e-78 297.4 337 57.3
arahy.Tifrunner.gnm1.ann1.LWY0NT Arachis hypogaea HOM05D005906 ORTHO05D007359 7.3e-78 296.6 336 57.1
Cpa.g.sc63.9 Carica papaya HOM05D005906 ORTHO05D007359 7.3e-78 296.6 314 60.8
Eucgr.G02565 Eucalyptus grandis HOM05D005906 ORTHO05D007359 7.3e-78 296.6 323 58.8
TPR.G21563 Trifolium pratense HOM05D005906 ORTHO05D007359 9.6e-78 296.2 323 58.8
ECA246G3641 Erigeron canadensis HOM05D005906 ORTHO05D007359 1.2e-77 295.8 314 57.3
Glyma.11G102600 Glycine max HOM05D005906 ORTHO05D007359 2.1e-77 295.0 323 59.4
EL10Ac9g22918 Beta vulgaris HOM05D005906 ORTHO05D007359 8.1e-77 293.1 337 58.5
CDE08G0300 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 8.1e-77 293.1 323 59.4
Sed0021796 Sechium edule HOM05D005906 ORTHO05D007359 6.8e-76 290.0 323 57.9
FAN07G0309 Fragaria x ananassa HOM05D005906 ORTHO05D007359 1.5e-75 288.9 333 59.5
unitig_26.g9977 Utricularia gibba HOM05D005906 ORTHO05D007359 2.0e-75 288.5 314 59.6
AUR62017662 Chenopodium quinoa HOM05D005906 ORTHO05D007359 4.4e-75 287.3 314 61.1
Glyma.11G103100 Glycine max HOM05D005906 ORTHO05D007359 1.3e-74 285.8 323 58.2
CANSAT64G0121 Cannabis sativa HOM05D005906 ORTHO05D007359 2.2e-74 285.0 323 57.3
TWI53G0095 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 2.9e-74 284.6 336 57.4
Potri.010G170400 Populus trichocarpa HOM05D005906 ORTHO05D007359 1.4e-73 282.3 343 56.0
MELO3C024279.2 Cucumis melo HOM05D005906 ORTHO05D007359 1.9e-73 282.0 314 58.9
PGR142G1078 Punica granatum HOM05D005906 ORTHO05D007359 5.4e-73 280.4 324 57.1
CsaV3_7G033650 Cucumis sativus L. HOM05D005906 ORTHO05D007359 1.6e-72 278.9 314 58.6
FAN12G0559 Fragaria x ananassa HOM05D005906 ORTHO05D007359 2.1e-72 278.5 315 59.4
A05p29280 Brassica napus HOM05D005906 ORTHO05D007359 3.5e-72 277.7 323 51.4
SEGI_19557 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 4.6e-72 277.3 323 55.7
SEGI_30722 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 4.6e-72 277.3 323 55.7
BraA05t21811Z Brassica rapa HOM05D005906 ORTHO05D007359 1.7e-71 275.4 323 50.8
C05p44790 Brassica napus HOM05D005906 ORTHO05D007359 2.3e-71 275.0 323 50.8
Sp3g17850 Schrenkiella parvula HOM05D005906 ORTHO05D007359 2.3e-71 275.0 314 53.2
CARHR095360 Cardamine hirsuta HOM05D005906 ORTHO05D007359 3.0e-71 274.6 327 52.9
Carub.0003s1972 Capsella rubella HOM05D005906 ORTHO05D007359 3.3e-70 271.2 314 54.1
HPP92_015160 Vanilla planifolia HOM05D005906 ORTHO05D007359 5.6e-70 270.4 305 57.4
AL3G33350 Arabidopsis lyrata HOM05D005906 ORTHO05D007359 1.6e-69 268.9 314 50.6
Aa31LG8G6610 Aethionema arabicum HOM05D005906 ORTHO05D007359 4.8e-69 267.3 327 52.6
Haze_11727 Corylus avellana HOM05D005906 ORTHO05D007359 4.8e-69 267.3 394 49.2
Thhalv10020134m.g Eutrema salsugineum HOM05D005906 ORTHO05D007359 6.2e-69 266.9 314 54.1
ClCG09G001670 Citrullus lanatus HOM05D005906 ORTHO05D007359 5.3e-68 263.8 315 56.5
CDE04G3187 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 1.2e-67 262.7 291 58.4
AT3G19840 Arabidopsis thaliana HOM05D005906 ORTHO05D007359 1.5e-67 262.3 314 53.2
Os10g0485000 Oryza sativa ssp. japonica HOM05D005906 ORTHO05D007359 7.6e-67 260.0 323 53.9
SMO347G0007 Selaginella moellendorffii HOM05D005906 ORTHO05D007359 8.4e-66 256.5 328 47.3
BolC5t33205H Brassica oleracea HOM05D005906 ORTHO05D007359 5.4e-65 253.8 370 44.3
Mapoly0048s0088 Marchantia polymorpha HOM05D005906 ORTHO05D007359 6.6e-63 246.9 352 48.9
Zm00001eb221360 Zea mays HOM05D005906 ORTHO05D007359 2.4e-60 238.4 323 51.7
AUR62015199 Chenopodium quinoa HOM05D005906 ORTHO05D007359 6.9e-60 236.9 314 48.4
Pp3c11_2890 Physcomitrium patens HOM05D005906 ORTHO05D007359 2.9e-58 231.5 323 49.8
Pp3c7_20890 Physcomitrium patens HOM05D005906 ORTHO05D007359 1.9e-57 228.8 323 48.9
CBR_g3777 Chara braunii HOM05D005906 ORTHO05D007359 1.4e-52 212.6 325 48.6
HanXRQChr13g0425271 Helianthus annuus HOM05D005906 ORTHO05D007359 1.9e-49 202.2 277 45.8
MD13G1008000 Malus domestica HOM05D005906 ORTHO05D007359 1.1e-46 193.0 188 69.7
BcaB06g26053 Brassica carinata HOM05D005906 ORTHO05D007359 2.1e-45 188.7 323 42.1
Psat5g190360 Pisum sativum HOM05D005906 ORTHO05D007359 7.2e-41 173.7 154 74.0
QL03p043467 Quercus lobata HOM05D005906 ORTHO05D007359 6.7e-39 167.2 177 54.2
Atru.chr11.1229 Acer truncatum HOM05D005906 ORTHO05D007359 8.2e-37 160.2 177 52.5
QL03p043450 Quercus lobata HOM05D005906 ORTHO05D007359 9.4e-33 146.7 147 70.7
Psat7g176600 Pisum sativum HOM05D005906 ORTHO05D007359 4.1e-28 131.3 83 77.1
ATR0618G038 Amborella trichopoda HOM05D005906 ORTHO05D007359 5.3e-28 131.0 83 77.1
ATR0618G367 Amborella trichopoda HOM05D005906 ORTHO05D007359 8.2e-21 107.1 77 72.7
Psat7g176560 Pisum sativum HOM05D005906 ORTHO05D007359 4.1e-20 104.8 117 69.2
arahy.Tifrunner.gnm1.ann1.RUY2TK Arachis hypogaea HOM05D005906 ORTHO05D007359 8.2e-13 80.5 56 71.4
Ca_03028_v3 Cicer arietinum L. HOM05D000001 ORTHO05D010984 4.7e-08 64.7 61 59.0
vmacro09118 Vaccinium macrocarpon HOM05D004474 ORTHO05D005538 4.0e-07 61.6 71 50.7
Cc02_g20050 Coffea canephora HOM05D002048 ORTHO05D002146 1.5e-06 59.7 233 29.6
Lj5g0025981 Lotus japonicus HOM05D002048 ORTHO05D002146 1.5e-06 59.7 242 25.2
CANSAT25G3132 Cannabis sativa HOM05D002048 ORTHO05D002146 2.6e-06 58.9 210 26.7
Oeu006722.1 Olea europaea HOM05D005906 ORTHO05D007359 7.5e-06 57.4 59 55.9
Hund00421 Selenicereus undatus HOM05D002048 ORTHO05D002146 7.5e-06 57.4 227 25.1
Medtr1g017520 Medicago truncatula HOM05D002048 ORTHO05D002146 9.8e-06 57.0 218 25.2


User provided reference genes

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