Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12999 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 3.0e-50 201.4 96 100.0
Actinidia11350 Actinidia chinensis HOM05D000207 ORTHO05D004956 1.5e-28 129.4 64 92.2
vmacro21393 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 3.3e-28 128.3 70 87.1
vmacro21388 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 9.5e-28 126.7 69 89.9
vmacro15450 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 1.2e-27 126.3 64 93.8
Actinidia39908 Actinidia chinensis HOM05D000207 ORTHO05D004956 2.8e-27 125.2 64 90.6
Oeu005091.1 Olea europaea HOM05D000207 ORTHO05D004956 3.6e-27 124.8 65 90.8
EL10Ac3g04993 Beta vulgaris HOM05D000001 ORTHO05D000003 4.7e-27 124.4 79 79.7
Sabra08G0128000 Salix brachista HOM05D000207 ORTHO05D004956 6.2e-27 124.0 67 86.6
Cpa.g.c34811.1 Carica papaya HOM05D000207 ORTHO05D004956 8.0e-27 123.6 78 78.2
AUR62026315 Chenopodium quinoa HOM05D000207 ORTHO05D004956 8.0e-27 123.6 64 92.2
AUR62026510 Chenopodium quinoa HOM05D000207 ORTHO05D004956 8.0e-27 123.6 64 92.2
Duzib043G0002 Durio zibethinus HOM05D000207 ORTHO05D004956 8.0e-27 123.6 64 92.2
Duzib160G0169 Durio zibethinus HOM05D000207 ORTHO05D004956 8.0e-27 123.6 64 92.2
Aqoxy1G01024 Aquilegia oxysepala HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
CSS0020261 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
Duzib235G1015 Durio zibethinus HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
Gohir.A05G111600 Gossypium hirsutum HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
Gohir.D05G112000 Gossypium hirsutum HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
Gorai.009G116200 Gossypium raimondii HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
Hund03049 Selenicereus undatus HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
Sc25g0003710 Simmondsia chinensis HOM05D000207 ORTHO05D004956 1.1e-26 123.2 64 90.6
Ciclev10013219m.g Citrus clementina HOM05D000207 ORTHO05D004956 1.4e-26 122.9 64 89.1
FAN01G2221 Fragaria x ananassa HOM05D000207 ORTHO05D004956 1.4e-26 122.9 70 81.4
FAN03G1535 Fragaria x ananassa HOM05D000207 ORTHO05D004956 1.4e-26 122.9 70 81.4
FAN25G2312 Fragaria x ananassa HOM05D000207 ORTHO05D004956 1.4e-26 122.9 64 89.1
PGSC0003DMG400029581 Solanum tuberosum HOM05D000207 ORTHO05D004956 1.4e-26 122.9 72 83.3
A04p07690 Brassica napus HOM05D000207 ORTHO05D000606 1.8e-26 122.5 83 72.3
BraA04t16461Z Brassica rapa HOM05D000207 ORTHO05D000606 1.8e-26 122.5 83 72.3
Cc03_g05640 Coffea canephora HOM05D000207 ORTHO05D004956 1.8e-26 122.5 64 87.5
Lsat_1_v5_gn_3_117461 Lactuca sativa HOM05D000207 ORTHO05D004956 1.8e-26 122.5 64 89.1
RcHm_v2.0_Chr5g0039761 Rosa chinensis HOM05D000207 ORTHO05D004956 1.8e-26 122.5 64 89.1
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 2.3e-26 122.1 76 75.0
BcaB02g08614 Brassica carinata HOM05D000207 ORTHO05D000606 2.3e-26 122.1 64 89.1
BcaC02g09324 Brassica carinata HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
BcaC06g35508 Brassica carinata HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
A07p09140 Brassica napus HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
C04p41370 Brassica napus HOM05D000207 ORTHO05D000606 2.3e-26 122.1 64 89.1
C07p14090 Brassica napus HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
BolC4t25716H Brassica oleracea HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
BolC7t41906H Brassica oleracea HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
BraA07t28708Z Brassica rapa HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
CANSAT54G2786 Cannabis sativa HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
MELO3C007190.2 Cucumis melo HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
CsaV3_6G051140 Cucumis sativus L. HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
Thhalv10021852m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
Nitab4.5_0001379g0120 Nicotiana tabacum HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
Nitab4.5_0003038g0050 Nicotiana tabacum HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
Potri.008G168000 Populus trichocarpa HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
Sabra10G0036900 Salix brachista HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
Solyc04g008890.3 Solanum lycopersicum HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
Solyc08g069080.4 Solanum lycopersicum HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
Sopen04g004070 Solanum pennellii HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
PGSC0003DMG400025301 Solanum tuberosum HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 90.6
THA.LOC104808632 Tarenaya hassleriana HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
TAR365G0659 Trochodendron aralioides HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
GSVIVG01027834001 Vitis vinifera HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
Zm00001eb176950 Zea mays HOM05D000207 ORTHO05D004956 2.3e-26 122.1 64 89.1
Aa31LG9G3040 Aethionema arabicum HOM05D001185 ORTHO05D002551 3.1e-26 121.7 73 78.1
CiPaw.01G183100 Carya illinoinensis HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
ClCG01G024000 Citrullus lanatus HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
MELO3C006416.2 Cucumis melo HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
CsaV3_3G012020 Cucumis sativus L. HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
ECA232G2626 Erigeron canadensis HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
ECA240G3918 Erigeron canadensis HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
HanXRQChr03g0091521 Helianthus annuus HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
HanXRQChr13g0421281 Helianthus annuus HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
Os08g0444100 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 87.5
PGR031G0434 Punica granatum HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
QL06p018332 Quercus lobata HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
Thecc.06G005500 Theobroma cacao HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
TWI53G1374 Tripterygium wilfordii HOM05D000207 ORTHO05D004956 3.1e-26 121.7 64 89.1
Atru.chr4.2043 Acer truncatum HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
Atru.chr4.2046 Acer truncatum HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
FvH4_3g22750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
FvH4_7g05750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
FAN06G2225 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
FAN10G1241 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.0e-26 121.3 71 81.7
FAN16G2624 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
Manes.15G041801 Manihot esculenta HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
Nn1g06872 Nelumbo nucifera HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 87.5
Potri.010G070500 Populus trichocarpa HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 89.1
Hund11897 Selenicereus undatus HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 89.1
Sopen08g022730 Solanum pennellii HOM05D000207 ORTHO05D004956 4.0e-26 121.3 64 89.1
AL7G41900 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
AT4G14342 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
arahy.Tifrunner.gnm1.ann1.AU04TH Arachis hypogaea HOM05D000207 ORTHO05D004956 5.2e-26 120.9 77 77.9
arahy.Tifrunner.gnm1.ann1.DCT04E Arachis hypogaea HOM05D000207 ORTHO05D004956 5.2e-26 120.9 65 86.2
arahy.Tifrunner.gnm1.ann1.Q94Q39 Arachis hypogaea HOM05D000677 ORTHO05D000727 5.2e-26 120.9 65 86.2
CANSAT78G1427 Cannabis sativa HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
Carub.0003s2357 Capsella rubella HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
CARHR099290 Cardamine hirsuta HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
Thhalv10026688m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
Lsat_1_v5_gn_6_103061 Lactuca sativa HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
Sp3g20990 Schrenkiella parvula HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 87.5
Sed0003648 Sechium edule HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 89.1
Sed0023527 Sechium edule HOM05D000207 ORTHO05D004956 5.2e-26 120.9 64 89.1
VMungo1127G0964 Vigna mungo HOM05D000207 ORTHO05D004956 5.2e-26 120.9 73 76.7
Ciclev10006856m.g Citrus clementina HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
COL.COLO4_26870 Corchorus olitorius HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
Migut.N00279 Erythranthe guttata HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 90.6
Hma1.2p1_0992F.1_g245270 Hydrangea macrophylla HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
MD03G1200200 Malus domestica HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
PSO170G5684 Papaver somniferum HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
PSO198G0064 Papaver somniferum HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
PSO210G1216 Papaver somniferum HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
SalBow3G2895 Salvia bowleyana HOM05D000207 ORTHO05D004956 6.8e-26 120.6 65 89.2
PGSC0003DMG400026872 Solanum tuberosum HOM05D000207 ORTHO05D004956 6.8e-26 120.6 65 90.8
HPP92_005049 Vanilla planifolia HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
HPP92_005064 Vanilla planifolia HOM05D000207 ORTHO05D004956 6.8e-26 120.6 64 87.5
ClCG05G004290 Citrullus lanatus HOM05D000207 ORTHO05D004956 8.9e-26 120.2 64 87.5
Os08g0278966 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 8.9e-26 120.2 64 85.9
PSO063G3293 Papaver somniferum HOM05D000207 ORTHO05D004956 8.9e-26 120.2 70 80.0
CDE06G2823 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 1.2e-25 119.8 64 87.5
Eucgr.E04319 Eucalyptus grandis HOM05D000207 ORTHO05D004956 1.2e-25 119.8 64 85.9
Prupe.4G214000 Prunus persica HOM05D000207 ORTHO05D004956 1.2e-25 119.8 64 87.5
Sp7g12410 Schrenkiella parvula HOM05D000207 ORTHO05D004956 1.2e-25 119.8 64 85.9
AL3G37970 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 1.5e-25 119.4 64 85.9
AT3G23325 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 1.5e-25 119.4 64 85.9
FAN05G5047 Fragaria x ananassa HOM05D000709 ORTHO05D004956 1.5e-25 119.4 64 85.9
FAN14G2395 Fragaria x ananassa HOM05D000709 ORTHO05D004956 1.5e-25 119.4 64 85.9
MSTRG.21917 Avicennia marina HOM05D000207 ORTHO05D004956 2.0e-25 119.0 64 89.1
FAN16G2286 Fragaria x ananassa HOM05D000207 ORTHO05D004956 2.0e-25 119.0 64 85.9
PSO210G6748 Papaver somniferum HOM05D000207 ORTHO05D004956 2.6e-25 118.6 64 84.4
Cfa022948 Carpinus fangiana HOM05D000411 ORTHO05D004956 3.4e-25 118.2 65 86.2
MD11G1217300 Malus domestica HOM05D000207 ORTHO05D004956 3.4e-25 118.2 64 84.4
unitig_748.g7329 Utricularia gibba HOM05D000207 ORTHO05D000606 3.4e-25 118.2 64 87.5
arahy.Tifrunner.gnm1.ann1.6C1XPZ Arachis hypogaea HOM05D000207 ORTHO05D004956 4.4e-25 117.9 64 84.4
DCAR_024259 Daucus carota HOM05D000207 ORTHO05D004956 4.4e-25 117.9 64 84.4
Dinv27061 Davidia involucrata HOM05D000207 ORTHO05D004956 4.4e-25 117.9 64 85.9
FAN02G2410 Fragaria x ananassa HOM05D000709 ORTHO05D004956 4.4e-25 117.9 64 84.4
Lalb_Chr02g0158811 Lupinus albus HOM05D000207 ORTHO05D004956 4.4e-25 117.9 64 84.4
CiPaw.02G111100 Carya illinoinensis HOM05D000207 ORTHO05D004956 5.8e-25 117.5 64 85.9
CBR_g8906 Chara braunii HOM05D000207 ORTHO05D004956 5.8e-25 117.5 64 84.4
Mapoly0001s0403 Marchantia polymorpha HOM05D000207 ORTHO05D004956 5.8e-25 117.5 64 84.4
Phvul.003G055200 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 5.8e-25 117.5 64 84.4
SMO232G0034 Selaginella moellendorffii HOM05D000207 ORTHO05D004956 7.5e-25 117.1 64 84.4
FAN09G1394 Fragaria x ananassa HOM05D000709 ORTHO05D004956 9.8e-25 116.7 64 84.4
Glyma.08G291500 Glycine max HOM05D000207 ORTHO05D004956 9.8e-25 116.7 64 82.8
Glyma.18G132700 Glycine max HOM05D000207 ORTHO05D004956 9.8e-25 116.7 64 82.8
Lj3g0015983 Lotus japonicus HOM05D000207 ORTHO05D004956 9.8e-25 116.7 64 82.8
Dinv36552 Davidia involucrata HOM05D000207 ORTHO05D004956 1.7e-24 115.9 64 85.9
AagrBONN_evm.TU.Sc2ySwM_344.2015 Anthoceros agrestis HOM05D000207 ORTHO05D004956 2.2e-24 115.5 64 85.9
Ca_08207_v3 Cicer arietinum L. HOM05D000207 ORTHO05D004956 2.9e-24 115.2 64 79.7
Psat4g126040 Pisum sativum HOM05D000207 ORTHO05D004956 2.9e-24 115.2 64 79.7
Psat6g018880 Pisum sativum HOM05D000207 ORTHO05D004956 2.9e-24 115.2 64 79.7
Migut.G00508 Erythranthe guttata HOM05D000207 ORTHO05D004956 3.7e-24 114.8 64 84.4
Medtr3g019300 Medicago truncatula HOM05D000207 ORTHO05D004956 6.4e-24 114.0 64 78.1
Medtr3g019310 Medicago truncatula HOM05D000207 ORTHO05D004956 6.4e-24 114.0 64 78.1
Medtr8g062750 Medicago truncatula HOM05D000207 ORTHO05D004956 6.4e-24 114.0 64 78.1
Phvul.009G163800 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 7.1e-23 110.5 60 83.3
RcHm_v2.0_Chr7g0179491 Rosa chinensis HOM05D000207 ORTHO05D004956 3.5e-22 108.2 64 78.1
MBI16_g42515_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 6.0e-22 107.5 73 72.6
A06p07840 Brassica napus HOM05D000207 ORTHO05D004956 7.8e-22 107.1 77 70.1
MBI07_g16899_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 1.7e-21 105.9 84 64.3
MCO09G487 Micromonas commoda HOM05D000207 ORTHO05D004956 1.1e-20 103.2 64 75.0
Cre14.g627900 Chlamydomonas reinhardtii HOM05D000207 ORTHO05D004956 1.6e-19 99.4 66 69.7
MD12G1011100 Malus domestica HOM05D000207 ORTHO05D004956 8.1e-19 97.1 78 65.4
VMungo0251G1197 Vigna mungo HOM05D000207 ORTHO05D004956 1.1e-18 96.7 58 74.1
PRCOL_00006150 Prasinoderma coloniale HOM05D000207 ORTHO05D004956 1.7e-16 89.4 64 65.6
unitig_32.g11701 Utricularia gibba HOM05D000207 ORTHO05D004956 1.4e-15 86.3 71 64.8
Lj4g0025571 Lotus japonicus HOM05D000207 ORTHO05D004956 7.8e-14 80.5 71 60.6
CAN.G274.30 Capsicum annuum HOM05D000207 ORTHO05D004956 1.3e-13 79.7 42 88.1
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 3.9e-13 78.2 45 77.8
Gohir.1Z049411 Gossypium hirsutum HOM05D000207 ORTHO05D004956 3.9e-13 78.2 39 89.7
A09p67600 Brassica napus HOM05D000207 ORTHO05D004956 5.1e-13 77.8 51 70.6
CDE02G4280 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 7.3e-12 73.9 41 82.9
Eucgr.L00218 Eucalyptus grandis HOM05D000207 ORTHO05D004956 9.6e-12 73.6 39 84.6
Pp3c25_1640 Physcomitrium patens HOM05D000207 ORTHO05D004956 3.1e-10 68.6 41 78.0
AagrBONN_evm.TU.Sc2ySwM_369.181 Anthoceros agrestis HOM05D000207 ORTHO05D004956 4.0e-10 68.2 41 75.6
vmacro16885 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 7.6e-09 63.9 45 68.9
AagrBONN_evm.TU.Sc2ySwM_344.4872 Anthoceros agrestis HOM05D000170 ORTHO05D000159 8.4e-08 60.5 30 86.7
Lj4g0019776 Lotus japonicus HOM05D000207 ORTHO05D004956 9.3e-07 57.0 64 50.0


User provided reference genes

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