Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12447 Vaccinium macrocarpon HOM05D004662 ORTHO05D005771 4.3e-96 354.8 193 100.0
Actinidia06666 Actinidia chinensis HOM05D004662 ORTHO05D005771 1.5e-72 276.6 193 79.8
vmacro12830 Vaccinium macrocarpon HOM05D004662 ORTHO05D005771 1.4e-70 270.0 196 80.1
HanXRQChr03g0092051 Helianthus annuus HOM05D004662 ORTHO05D005771 4.5e-69 265.0 196 78.1
Lj4A308T25 Lonicera japonica HOM05D004662 ORTHO05D005771 2.1e-66 256.1 196 75.5
MD12G1216200 Malus domestica HOM05D004662 ORTHO05D005771 4.7e-66 255.0 198 74.7
PGSC0003DMG400006987 Solanum tuberosum HOM05D004662 ORTHO05D005771 6.1e-66 254.6 196 77.0
Rhsim10G0141700 Rhododendron simsii HOM05D004662 ORTHO05D005771 7.9e-66 254.2 196 76.5
Prupe.7G048200 Prunus persica HOM05D004662 ORTHO05D005771 1.0e-65 253.8 198 73.2
Sopen05g029520 Solanum pennellii HOM05D004662 ORTHO05D005771 1.4e-65 253.4 196 76.5
CAN.G112.7 Capsicum annuum HOM05D004662 ORTHO05D005771 3.0e-65 252.3 196 75.5
Solyc05g051070.3 Solanum lycopersicum HOM05D004662 ORTHO05D005771 3.9e-65 251.9 193 76.7
CANSAT21G0749 Cannabis sativa HOM05D004662 ORTHO05D005771 2.6e-64 249.2 200 72.0
Gohir.A02G138300 Gossypium hirsutum HOM05D004662 ORTHO05D005771 3.3e-64 248.8 197 73.1
PSO210G1432 Papaver somniferum HOM05D004662 ORTHO05D005771 1.7e-63 246.5 194 72.7
Gohir.D03G048900 Gossypium hirsutum HOM05D004662 ORTHO05D005771 2.2e-63 246.1 197 72.6
Gorai.003G050200 Gossypium raimondii HOM05D004662 ORTHO05D005771 2.2e-63 246.1 197 72.6
CSS0002771 Camellia sinensis var. sinensis HOM05D004662 ORTHO05D005771 3.7e-63 245.4 196 74.0
Haze_08022 Corylus avellana HOM05D004662 ORTHO05D005771 6.3e-63 244.6 202 68.8
HPP92_002769 Vanilla planifolia HOM05D004662 ORTHO05D005771 6.3e-63 244.6 198 69.2
COL.COLO4_22423 Corchorus olitorius HOM05D004662 ORTHO05D005771 8.2e-63 244.2 199 69.8
Peaxi162Scf00424g00027 Petunia axillaris HOM05D004662 ORTHO05D005771 8.2e-63 244.2 193 74.6
Potri.017G060200 Populus trichocarpa HOM05D004662 ORTHO05D005771 1.1e-62 243.8 200 71.0
Lj3g0018695 Lotus japonicus HOM05D004662 ORTHO05D005771 1.4e-62 243.4 199 70.4
MELO3C023475.2 Cucumis melo HOM05D004662 ORTHO05D005771 3.1e-62 242.3 198 70.2
CsaV3_7G031820 Cucumis sativus L. HOM05D004662 ORTHO05D005771 4.1e-62 241.9 198 70.2
ClCG01G004580 Citrullus lanatus HOM05D004662 ORTHO05D005771 7.0e-62 241.1 198 69.7
ClCG01G004620 Citrullus lanatus HOM05D004662 ORTHO05D005771 7.0e-62 241.1 198 69.7
ECA240G2833 Erigeron canadensis HOM05D004662 ORTHO05D005771 7.0e-62 241.1 195 70.3
Eucgr.C00068 Eucalyptus grandis HOM05D004662 ORTHO05D005771 1.2e-61 240.4 200 69.5
Thecc.01G121500 Theobroma cacao HOM05D004662 ORTHO05D005771 1.5e-61 240.0 199 71.4
PGR142G0905 Punica granatum HOM05D004662 ORTHO05D005771 2.0e-61 239.6 200 70.0
Aa31LG8G5630 Aethionema arabicum HOM05D004662 ORTHO05D005771 2.6e-61 239.2 196 68.9
Atru.chr10.136 Acer truncatum HOM05D004662 ORTHO05D005771 3.5e-61 238.8 197 68.5
DCAR_011479 Daucus carota HOM05D004662 ORTHO05D005771 3.5e-61 238.8 197 69.0
Duzib187G0757 Durio zibethinus HOM05D004662 ORTHO05D005771 3.5e-61 238.8 197 71.1
arahy.Tifrunner.gnm1.ann1.MTS4VB Arachis hypogaea HOM05D004662 ORTHO05D005771 4.5e-61 238.4 196 68.4
ClCG09G016740 Citrullus lanatus HOM05D004662 ORTHO05D005771 5.9e-61 238.0 198 69.2
Peaxi162Scf00751g00215 Petunia axillaris HOM05D004662 ORTHO05D005771 5.9e-61 238.0 195 71.3
Sed0008619 Sechium edule HOM05D004662 ORTHO05D005771 7.7e-61 237.7 198 69.7
Cfa012638 Carpinus fangiana HOM05D004662 ORTHO05D005771 1.0e-60 237.3 202 68.3
DCAR_001862 Daucus carota HOM05D004662 ORTHO05D005771 1.0e-60 237.3 197 68.5
Psat2g008160 Pisum sativum HOM05D004662 ORTHO05D005771 1.0e-60 237.3 199 67.8
Medtr5g095510 Medicago truncatula HOM05D004662 ORTHO05D005771 1.7e-60 236.5 199 67.3
Nitab4.5_0009675g0010 Nicotiana tabacum HOM05D004662 ORTHO05D005771 2.9e-60 235.7 195 73.3
CDE08G1373 Ceratophyllum demersum HOM05D004662 ORTHO05D005771 3.8e-60 235.3 195 69.2
Thhalv10021236m.g Eutrema salsugineum HOM05D004662 ORTHO05D005771 8.5e-60 234.2 195 67.7
Manes.01G056600 Manihot esculenta HOM05D004662 ORTHO05D005771 1.1e-59 233.8 200 70.0
Sabra17G0054100 Salix brachista HOM05D004662 ORTHO05D005771 1.5e-59 233.4 199 68.3
EL10Ac8g20458 Beta vulgaris HOM05D004662 ORTHO05D005771 1.9e-59 233.0 190 71.1
Cc07_g17380 Coffea canephora HOM05D004662 ORTHO05D005771 1.9e-59 233.0 198 70.7
RcHm_v2.0_Chr4g0411521 Rosa chinensis HOM05D004662 ORTHO05D005771 3.2e-59 232.3 199 68.3
Ciclev10016087m.g Citrus clementina HOM05D004662 ORTHO05D005771 5.5e-59 231.5 197 67.5
Nitab4.5_0000777g0160 Nicotiana tabacum HOM05D004662 ORTHO05D005771 5.5e-59 231.5 192 72.9
SGA_v2.0_scaffold137G35115 Striga asiatica HOM05D004662 ORTHO05D005771 7.2e-59 231.1 197 68.0
SalBow5G3393 Salvia bowleyana HOM05D004662 ORTHO05D005771 9.4e-59 230.7 197 68.0
TWI75G1338 Tripterygium wilfordii HOM05D004662 ORTHO05D005771 9.4e-59 230.7 198 67.7
AUR62014898 Chenopodium quinoa HOM05D004662 ORTHO05D005771 1.2e-58 230.3 193 69.4
FvH4_4g12620 Fragaria vesca HOM05D004662 ORTHO05D005771 1.6e-58 229.9 199 67.8
FAN07G1901 Fragaria x ananassa HOM05D004662 ORTHO05D005771 1.6e-58 229.9 199 67.8
FAN12G2661 Fragaria x ananassa HOM05D004662 ORTHO05D005771 1.6e-58 229.9 199 67.8
Migut.M00378 Erythranthe guttata HOM05D004662 ORTHO05D005771 2.1e-58 229.6 196 66.3
FAN17G2854 Fragaria x ananassa HOM05D004662 ORTHO05D005771 2.1e-58 229.6 198 67.7
SEGI_04038 Sequoiadendron giganteum HOM05D004662 ORTHO05D005771 2.7e-58 229.2 195 66.7
ATR0051G034 Amborella trichopoda HOM05D004662 ORTHO05D005771 6.1e-58 228.0 196 66.3
Ah.05g168710 Amaranthus hybridus HOM05D004662 ORTHO05D005771 8.0e-58 227.6 197 68.5
Aqoxy6G00053 Aquilegia oxysepala HOM05D004662 ORTHO05D005771 8.0e-58 227.6 195 70.3
Lalb_Chr03g0030851 Lupinus albus HOM05D004662 ORTHO05D005771 8.0e-58 227.6 201 66.7
Lalb_Chr03g0030921 Lupinus albus HOM05D004662 ORTHO05D005771 8.0e-58 227.6 201 66.7
Lalb_Chr03g0030931 Lupinus albus HOM05D004662 ORTHO05D005771 8.0e-58 227.6 201 66.7
CiPaw.11G076400 Carya illinoinensis HOM05D004662 ORTHO05D005771 1.4e-57 226.9 202 65.3
Nn5g28723 Nelumbo nucifera HOM05D004662 ORTHO05D005771 3.9e-57 225.3 195 66.7
Dinv09932 Davidia involucrata HOM05D004662 ORTHO05D005771 6.7e-57 224.6 193 69.4
THA.LOC104815455 Tarenaya hassleriana HOM05D004662 ORTHO05D005771 6.7e-57 224.6 197 66.0
AUR62031104 Chenopodium quinoa HOM05D004662 ORTHO05D005771 1.1e-56 223.8 185 69.7
QL09p054497 Quercus lobata HOM05D004662 ORTHO05D005771 1.5e-56 223.4 201 63.7
Ca_07798_v3 Cicer arietinum L. HOM05D004662 ORTHO05D005771 2.6e-56 222.6 200 65.5
Lsat_1_v5_gn_3_121781 Lactuca sativa HOM05D004662 ORTHO05D005771 2.6e-56 222.6 175 73.7
Ca_05756_v3 Cicer arietinum L. HOM05D004662 ORTHO05D005771 4.4e-56 221.9 199 65.8
Sc23g0004520 Simmondsia chinensis HOM05D004662 ORTHO05D005771 4.4e-56 221.9 201 65.2
ATR0772G105 Amborella trichopoda HOM05D004662 ORTHO05D005771 9.7e-56 220.7 196 63.8
QL12p002363 Quercus lobata HOM05D004662 ORTHO05D005771 1.7e-55 219.9 201 64.7
TPR.G8614 Trifolium pratense HOM05D004662 ORTHO05D005771 2.2e-55 219.5 199 64.3
TAR376G0935 Trochodendron aralioides HOM05D004662 ORTHO05D005771 2.8e-55 219.2 195 66.7
Glyma.09G114600 Glycine max HOM05D004662 ORTHO05D005771 3.7e-55 218.8 195 64.6
GSVIVG01026585001 Vitis vinifera HOM05D004662 ORTHO05D005771 3.7e-55 218.8 193 64.8
Glyma.14G078500 Glycine max HOM05D004662 ORTHO05D005771 6.3e-55 218.0 195 64.1
MBI17_g31489_MAGBIO Magnolia biondii HOM05D004662 ORTHO05D005771 6.3e-55 218.0 196 65.3
C01p45240 Brassica napus HOM05D004662 ORTHO05D005771 8.2e-55 217.6 199 63.3
BcaB06g25932 Brassica carinata HOM05D004662 ORTHO05D005771 2.4e-54 216.1 196 63.8
A05p30810 Brassica napus HOM05D004662 ORTHO05D005771 4.1e-54 215.3 196 62.2
MSTRG.2689 Avicennia marina HOM05D004662 ORTHO05D005771 5.3e-54 214.9 197 64.0
BcaB04g20746 Brassica carinata HOM05D004662 ORTHO05D005771 7.0e-54 214.5 195 65.1
BraA05t21923Z Brassica rapa HOM05D004662 ORTHO05D005771 7.0e-54 214.5 196 62.2
Sp3g16880 Schrenkiella parvula HOM05D004662 ORTHO05D005771 7.0e-54 214.5 195 63.1
AL3G32170 Arabidopsis lyrata HOM05D004662 ORTHO05D005771 2.6e-53 212.6 197 62.4
TAR628G0746 Trochodendron aralioides HOM05D004662 ORTHO05D005771 2.6e-53 212.6 193 64.8
AT3G18790 Arabidopsis thaliana HOM05D004662 ORTHO05D005771 3.5e-53 212.2 197 61.9
Carub.0003s1861 Capsella rubella HOM05D004662 ORTHO05D005771 5.9e-53 211.5 197 61.9
Cpa.g.sc42.90 Carica papaya HOM05D004662 ORTHO05D005771 1.0e-52 210.7 201 63.7
unitig_699.g19713 Utricularia gibba HOM05D004662 ORTHO05D005771 2.2e-52 209.5 197 62.9
Glyma.06G234100 Glycine max HOM05D004662 ORTHO05D005771 1.5e-51 206.8 196 61.7
SHI06523 Sapria himalayana HOM05D004662 ORTHO05D005771 5.5e-51 204.9 193 63.2
BcaC05g28571 Brassica carinata HOM05D004662 ORTHO05D005771 7.2e-51 204.5 195 60.0
C05p46730 Brassica napus HOM05D004662 ORTHO05D005771 7.2e-51 204.5 195 60.0
BolC5t33400H Brassica oleracea HOM05D004662 ORTHO05D005771 7.2e-51 204.5 195 60.0
CARHR094200 Cardamine hirsuta HOM05D004662 ORTHO05D005771 1.6e-50 203.4 195 61.0
VMungo1309G1891 Vigna mungo HOM05D004662 ORTHO05D005771 4.7e-50 201.8 188 61.7
Phvul.006G049400 Phaseolus vulgaris HOM05D004662 ORTHO05D005771 2.3e-49 199.5 196 60.7
Phvul.008G233000 Phaseolus vulgaris HOM05D004662 ORTHO05D005771 3.0e-49 199.1 197 60.9
Sc23g0004080 Simmondsia chinensis HOM05D004662 ORTHO05D005771 3.0e-49 199.1 193 59.6
Zm00001eb246450 Zea mays HOM05D004662 ORTHO05D005771 7.5e-48 194.5 204 56.9
AagrBONN_evm.TU.Sc2ySwM_368.1726 Anthoceros agrestis HOM05D004662 ORTHO05D005771 1.7e-47 193.4 190 61.6
Mapoly0026s0083 Marchantia polymorpha HOM05D004662 ORTHO05D005771 1.1e-46 190.7 195 56.9
Lalb_Chr01g0006671 Lupinus albus HOM05D004662 ORTHO05D005771 2.4e-46 189.5 198 59.1
Os02g0602500 Oryza sativa ssp. japonica HOM05D004662 ORTHO05D005771 4.1e-46 188.7 204 54.9
Hma1.2p1_0006F.1_g004870 Hydrangea macrophylla HOM05D004662 ORTHO05D005771 7.0e-46 188.0 190 60.0
BcaC09g48849 Brassica carinata HOM05D004662 ORTHO05D005771 2.9e-44 182.6 193 57.0
Gorai.003G131300 Gossypium raimondii HOM05D004662 ORTHO05D005771 3.2e-43 179.1 195 56.9
Gohir.A03G042500 Gossypium hirsutum HOM05D004662 ORTHO05D005771 9.4e-43 177.6 175 62.9
Pp3c13_15060 Physcomitrium patens HOM05D004662 ORTHO05D005771 4.0e-41 172.2 193 53.9
Sc23g0004530 Simmondsia chinensis HOM05D004662 ORTHO05D005771 1.7e-39 166.8 170 60.6
SMO274G0029 Selaginella moellendorffii HOM05D004662 ORTHO05D005771 2.8e-39 166.0 198 50.0
Prupe.6G322400 Prunus persica HOM05D004662 ORTHO05D005771 4.9e-39 165.2 182 55.5
Gohir.D03G125150 Gossypium hirsutum HOM05D004662 ORTHO05D005771 2.4e-38 162.9 194 54.1
CBR_g84973 Chara braunii HOM05D004662 ORTHO05D005771 1.8e-30 136.7 206 43.7
Peaxi162Scf00134g00137 Petunia axillaris HOM05D004662 ORTHO05D005771 3.5e-29 132.5 89 73.0
SMO134G0084 Selaginella moellendorffii HOM05D004662 ORTHO05D005771 1.1e-27 127.5 194 43.8
Dinv05182 Davidia involucrata HOM05D004662 ORTHO05D005771 5.6e-27 125.2 193 48.2
Cre10.g427150 Chlamydomonas reinhardtii HOM05D004662 ORTHO05D005771 7.5e-24 114.8 189 42.9
Sc23g0003810 Simmondsia chinensis HOM05D004662 ORTHO05D005771 7.0e-22 108.2 170 45.9
COL.COLO4_10520 Corchorus olitorius HOM05D004662 ORTHO05D005771 9.2e-22 107.8 194 42.3
MCO03G092 Micromonas commoda HOM05D004662 ORTHO05D005771 6.6e-20 101.7 173 41.6
Dinv15114 Davidia involucrata HOM05D004662 ORTHO05D005771 8.6e-20 101.3 192 42.7
Zm00001eb424510 Zea mays HOM05D004662 ORTHO05D005771 5.6e-19 98.6 75 66.7
Zm00001eb116840 Zea mays HOM05D004662 ORTHO05D441867 2.8e-18 96.3 75 66.7
Zm00001eb143820 Zea mays HOM05D004662 ORTHO05D005771 1.1e-17 94.4 58 75.9
COL.COLO4_20103 Corchorus olitorius HOM05D000161 ORTHO05D000111 3.4e-16 89.4 150 47.3
VMungo0540G2311 Vigna mungo HOM05D004662 ORTHO05D005771 2.7e-13 79.7 111 47.7
VMungo1309G1979 Vigna mungo HOM05D004662 ORTHO05D005771 3.9e-12 75.9 112 44.6
VMungo0720G0221 Vigna mungo HOM05D004662 ORTHO05D005771 6.6e-12 75.1 93 58.1
PRCOL_00003362 Prasinoderma coloniale HOM05D004662 ORTHO05D005771 8.6e-12 74.7 188 36.7
A01p35650 Brassica napus HOM05D004662 ORTHO05D005771 2.8e-10 69.7 101 48.5
BraA01t03647Z Brassica rapa HOM05D004662 ORTHO05D005771 8.1e-10 68.2 101 48.5
CAN.G184.48 Capsicum annuum HOM05D004662 ORTHO05D005771 1.2e-08 64.3 56 67.9
CAN.G1058.32 Capsicum annuum HOM05D004662 ORTHO05D005771 4.4e-08 62.4 78 57.7
VMungo1309G1313 Vigna mungo HOM05D004662 ORTHO05D005771 4.4e-08 62.4 77 50.6
Haze_26219 Corylus avellana HOM05D004662 ORTHO05D005771 2.9e-07 59.7 70 41.4
VMungo1127G1535 Vigna mungo HOM05D004662 ORTHO05D005771 2.9e-07 59.7 94 39.4
Hma1.2p1_0006F.1_g004860 Hydrangea macrophylla HOM05D004662 ORTHO05D005771 4.9e-07 58.9 28 92.9


User provided reference genes

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