Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.3e-180 636.3 325 100.0
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 7.0e-107 391.3 325 65.2
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 1.4e-86 323.9 322 54.0
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.6e-85 319.7 325 56.0
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.6e-85 319.7 325 56.0
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.7e-82 309.7 321 52.6
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 3.3e-80 302.8 322 49.7
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 9.5e-80 301.2 322 49.7
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.2e-79 300.8 322 50.0
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 1.2e-77 294.3 326 49.1
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 2.6e-77 293.1 322 48.8
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 7.6e-77 291.6 322 48.4
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 7.6e-77 291.6 322 48.4
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 3.8e-76 289.3 322 48.4
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 1.6e-74 283.9 323 47.7
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 1.6e-74 283.9 323 48.0
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 2.1e-74 283.5 290 51.0
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 3.5e-74 282.7 322 47.8
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 4.6e-74 282.3 321 47.0
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 6.0e-74 282.0 321 47.7
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 1.7e-73 280.4 325 47.1
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 3.0e-73 279.6 318 47.5
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 8.6e-73 278.1 323 48.6
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.1e-72 277.7 321 47.7
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 1.5e-72 277.3 316 47.8
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 3.3e-72 276.2 319 46.7
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 4.7e-71 272.3 322 46.3
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 8.1e-71 271.6 319 45.8
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 8.9e-70 268.1 325 45.5
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 8.9e-70 268.1 325 45.5
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.2e-69 267.7 322 45.0
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.5e-69 267.3 316 44.6
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 2.0e-69 266.9 323 44.6
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 5.8e-69 265.4 325 45.2
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 5.8e-69 265.4 324 45.4
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 7.6e-69 265.0 326 46.9
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 2.9e-68 263.1 324 45.1
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 3.8e-68 262.7 323 46.1
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 3.8e-68 262.7 341 43.1
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 4.9e-68 262.3 318 44.0
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 1.4e-67 260.8 318 43.7
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 1.4e-67 260.8 281 49.1
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.4e-67 260.8 319 45.1
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 2.4e-67 260.0 275 52.0
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 4.2e-67 259.2 318 43.7
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 7.1e-67 258.5 318 43.7
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 9.3e-67 258.1 324 44.4
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 7.8e-66 255.0 326 44.5
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 1.3e-65 254.2 325 42.8
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 1.3e-65 254.2 319 43.9
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 1.7e-65 253.8 322 43.2
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 3.0e-65 253.1 318 44.0
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 5.1e-65 252.3 318 44.0
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 5.1e-65 252.3 318 43.4
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.5e-64 250.8 318 44.0
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 1.9e-64 250.4 319 43.9
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 2.5e-64 250.0 319 43.6
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 4.3e-64 249.2 318 43.7
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 4.3e-64 249.2 325 43.4
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 1.3e-63 247.7 322 43.5
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 4.8e-63 245.7 318 44.0
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 4.8e-63 245.7 280 45.7
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 1.1e-62 244.6 321 42.1
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.1e-62 244.6 323 43.7
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.4e-62 244.2 322 42.2
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 4.0e-62 242.7 323 43.0
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 2.6e-61 240.0 326 42.6
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 4.5e-61 239.2 323 42.4
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 7.6e-61 238.4 316 41.5
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 7.6e-61 238.4 323 42.4
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 1.7e-60 237.3 306 42.8
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 6.4e-60 235.3 316 42.7
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 6.4e-60 235.3 321 41.7
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 1.1e-59 234.6 313 41.5
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.4e-59 234.2 323 41.5
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 9.3e-59 231.5 321 41.7
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 1.2e-58 231.1 321 41.1
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 1.2e-58 231.1 325 41.2
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.2e-58 231.1 325 41.5
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.2e-58 231.1 322 39.8
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.2e-58 231.1 322 39.8
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 1.6e-58 230.7 321 39.3
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 7.9e-58 228.4 325 40.9
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 2.3e-57 226.9 323 40.6
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 5.1e-57 225.7 276 46.0
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 1.1e-56 224.6 321 40.2
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 5.6e-56 222.2 292 43.8
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 7.4e-56 221.9 314 40.4
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 1.4e-54 217.6 316 39.6
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 5.8e-53 212.2 322 39.4
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 5.5e-51 205.7 280 40.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 3.5e-50 203.0 321 36.8
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 1.5e-48 197.6 259 42.5
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 5.3e-46 189.1 124 77.4
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 2.2e-44 183.7 274 37.6
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 3.3e-40 169.9 322 34.8
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 5.7e-40 169.1 131 61.1
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 7.4e-40 168.7 564 27.0
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 1.3e-39 167.9 252 40.1
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 1.6e-39 167.5 315 34.0
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 6.3e-39 165.6 253 42.3
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.0e-36 158.3 130 63.1
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 6.5e-36 155.6 132 65.2
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 3.6e-34 149.8 131 60.3
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.3e-33 147.9 320 30.0
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 1.5e-32 144.4 131 55.7
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.9e-28 130.2 317 26.2
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 2.2e-23 114.0 311 24.1
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 3.7e-23 113.2 331 25.7
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.9e-19 100.9 106 50.9
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 7.9e-18 95.5 109 42.2
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 2.3e-17 94.0 101 44.6
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 7.0e-14 82.4 120 32.5
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 1.2e-13 81.6 140 35.0
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.9e-11 74.3 109 33.0
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.9e-11 74.3 120 33.3
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 4.0e-09 66.6 121 37.2
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 8.8e-09 65.5 110 39.1
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 2.6e-08 63.9 54 57.4
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 1.3e-07 61.6 57 56.1
Nn2g11894 Nelumbo nucifera HOM05D001060 ORTHO05D008097 1.7e-07 61.2 122 34.4
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 4.1e-06 56.6 57 42.1


User provided reference genes

Program Settings