Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 5.5e-209 730.7 366 100.0
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 5.5e-177 624.4 366 88.0
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 8.6e-146 520.8 363 75.8
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 2.0e-142 509.6 363 74.9
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 3.4e-142 508.8 363 73.3
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 6.4e-141 504.6 363 72.7
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 1.9e-140 503.1 360 72.5
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 2.1e-139 499.6 363 71.3
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 3.5e-139 498.8 361 72.0
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 6.0e-139 498.0 363 72.2
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 1.0e-138 497.3 363 72.7
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.3e-138 496.9 361 71.7
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 1.3e-138 496.9 360 71.7
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 5.1e-138 495.0 366 69.7
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 5.1e-138 495.0 360 71.4
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 8.6e-138 494.2 363 70.5
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 8.6e-138 494.2 366 70.8
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 8.6e-138 494.2 363 70.5
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 1.1e-137 493.8 366 69.9
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 1.1e-137 493.8 362 70.4
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.1e-137 493.8 363 70.5
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.1e-137 493.8 363 70.5
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 1.5e-137 493.4 364 70.3
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.5e-137 493.4 364 70.6
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.5e-137 493.4 364 70.1
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 1.5e-137 493.4 362 70.2
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.9e-137 493.0 366 70.8
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.9e-137 493.0 362 70.7
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 2.5e-137 492.7 364 70.3
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 2.5e-137 492.7 366 70.8
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 3.3e-137 492.3 362 70.2
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 4.3e-137 491.9 364 70.1
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 5.6e-137 491.5 363 70.0
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 5.6e-137 491.5 363 70.5
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 7.3e-137 491.1 361 73.4
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 9.6e-137 490.7 365 69.3
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 9.6e-137 490.7 364 70.1
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 9.6e-137 490.7 364 69.8
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 9.6e-137 490.7 362 70.2
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 9.6e-137 490.7 363 69.7
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 1.2e-136 490.3 362 69.6
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.6e-136 490.0 366 70.5
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 2.1e-136 489.6 363 70.2
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 2.1e-136 489.6 361 69.8
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 2.8e-136 489.2 360 70.3
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 3.6e-136 488.8 366 70.5
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 3.6e-136 488.8 366 69.7
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 3.6e-136 488.8 364 69.2
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 3.6e-136 488.8 418 67.5
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 4.7e-136 488.4 362 70.4
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 6.2e-136 488.0 363 71.1
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 6.2e-136 488.0 389 70.4
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 6.2e-136 488.0 363 70.5
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 8.1e-136 487.6 363 69.4
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 8.1e-136 487.6 364 69.8
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 8.1e-136 487.6 363 69.4
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 8.1e-136 487.6 362 69.9
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 1.1e-135 487.3 364 69.2
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 1.1e-135 487.3 362 70.4
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 1.4e-135 486.9 363 69.4
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.8e-135 486.5 362 69.6
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.8e-135 486.5 362 69.6
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 3.1e-135 485.7 363 68.9
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 4.0e-135 485.3 363 69.7
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 5.2e-135 485.0 363 70.0
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 6.8e-135 484.6 371 68.2
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 6.8e-135 484.6 366 69.1
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 6.8e-135 484.6 363 68.6
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 8.9e-135 484.2 362 70.2
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 1.2e-134 483.8 362 69.6
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 1.2e-134 483.8 363 69.4
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 1.5e-134 483.4 363 70.0
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 1.5e-134 483.4 361 69.5
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 2.0e-134 483.0 362 69.3
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.6e-134 482.6 363 69.7
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.4e-134 482.3 363 69.7
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 5.8e-134 481.5 365 69.6
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 9.9e-134 480.7 363 69.1
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.3e-133 480.3 366 68.6
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.3e-133 480.3 366 68.6
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 1.3e-133 480.3 364 69.0
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 1.7e-133 479.9 365 69.3
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 2.9e-133 479.2 360 68.6
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 2.9e-133 479.2 360 68.6
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 2.9e-133 479.2 368 69.0
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 3.8e-133 478.8 362 68.8
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 4.9e-133 478.4 366 68.3
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 8.4e-133 477.6 349 71.1
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 8.4e-133 477.6 363 68.9
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 1.4e-132 476.9 363 68.9
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 1.4e-132 476.9 384 65.6
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.4e-132 476.1 363 67.8
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 7.1e-132 474.6 366 67.5
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 3.5e-131 472.2 369 68.6
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 4.6e-131 471.9 364 68.7
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 1.0e-130 470.7 364 68.4
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.0e-130 470.7 366 68.6
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 1.3e-130 470.3 364 68.1
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 8.7e-130 467.6 345 71.0
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 3.3e-129 465.7 347 70.6
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 5.6e-129 464.9 363 67.2
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 2.8e-128 462.6 354 70.9
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 6.2e-128 461.5 362 67.4
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.1e-127 460.7 344 70.6
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 2.4e-127 459.5 347 68.6
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 4.0e-127 458.8 345 69.6
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 4.0e-127 458.8 347 69.2
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 4.0e-127 458.8 364 66.5
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 9.0e-127 457.6 344 70.3
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 4.4e-126 455.3 347 68.9
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 7.6e-126 454.5 360 67.2
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 9.9e-126 454.1 331 73.4
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.9e-125 452.6 368 66.3
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.9e-125 452.6 368 66.3
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 3.8e-125 452.2 366 65.6
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 4.9e-125 451.8 344 69.2
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 1.1e-124 450.7 366 66.9
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.4e-124 450.3 345 67.5
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 2.4e-124 449.5 342 70.5
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.6e-123 446.8 379 65.2
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 1.5e-121 440.3 345 68.1
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 4.3e-121 438.7 345 68.7
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 5.6e-121 438.3 365 64.1
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.1e-120 436.4 363 64.5
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 6.9e-119 431.4 332 70.2
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 9.0e-119 431.0 363 63.6
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 3.4e-118 429.1 327 68.8
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 5.8e-118 428.3 327 69.1
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 6.4e-117 424.9 345 64.1
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 6.0e-115 418.3 404 58.4
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 3.0e-114 416.0 360 59.7
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 5.6e-113 411.8 317 70.7
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 9.6e-113 411.0 312 69.6
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.8e-111 406.8 358 58.1
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 3.1e-111 406.0 319 67.7
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.5e-110 403.7 328 66.2
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 2.5e-108 396.4 362 61.0
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 6.9e-103 378.3 245 77.6
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 2.9e-101 372.9 359 54.6
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 5.5e-100 368.6 347 59.9
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.3e-93 347.4 442 48.6
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 6.5e-93 345.1 221 77.4
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.5e-92 343.2 249 69.9
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 1.4e-87 327.4 349 54.4
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 1.1e-84 317.8 203 77.3
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 8.2e-80 301.6 335 54.3
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 1.3e-72 277.7 350 49.1
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-71 273.9 202 66.8
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.2e-68 262.7 219 64.8
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 2.1e-67 260.4 327 48.3
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 4.0e-58 229.6 349 38.1
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 3.0e-45 186.8 233 51.1
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 3.3e-44 183.3 177 58.8
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 3.3e-44 183.3 177 58.8
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 4.6e-30 136.3 185 46.5
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.6e-27 127.9 154 52.6
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 3.8e-24 116.7 68 77.9
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.1e-23 115.2 82 72.0
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-20 104.4 109 56.0
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-20 104.4 109 56.0
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 2.1e-19 100.9 64 76.6
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 2.4e-18 97.4 102 49.0
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 3.8e-16 90.1 51 78.4
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.5e-12 77.4 135 40.0
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 1.6e-11 74.7 44 79.5
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.1e-11 74.3 90 53.3
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 3.4e-09 67.0 76 51.3
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 3.4e-09 67.0 42 81.0
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-08 64.7 41 70.7
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 1.9e-07 61.2 38 81.6


User provided reference genes

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