Gene: vmacro07967

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro07967
  • Transcript Identifier vmacro07967-RA
  • Gene Type Coding gene
  • Location chr6_Vaccinium_macrocarpon_Stevens_v1 : 37196172-37205729 : positive

Gene Family Information

  • ID HOM05D004270
  • #Genes/#Species 166/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro07967_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to KDSA1: 2-dehydro-3-deoxyphosphooctonate aldolase 1 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009058
ISO
PLAZA Homology (enrichment)biosynthetic process HOM05D004270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003824
IEA
InterProcatalytic activity
GO:0008676
IEA
InterPro3-deoxy-8-phosphooctulonate synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001611 Leucine-rich repeat
IPR013785 Aldolase-type TIM barrel
IPR006269 3-deoxy-8-phosphooctulonate synthase
IPR032675 Leucine-rich repeat domain superfamily
Mapman id Description
21.3.3.1.2.2 Cell wall organisation.pectin.rhamnogalacturonan II.biosynthesis.2-keto-3-deoxymanno-octulosonic acid (KDO) biosynthesis.KDO-8-phosphate synthase