Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 7.2e-231 803.5 397 100.0
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.8e-136 490.0 418 67.5
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.9e-131 472.6 397 67.8
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.3e-118 430.6 394 62.2
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 1.7e-118 430.3 394 61.9
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 7.7e-116 421.4 394 60.7
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 1.7e-115 420.2 391 59.6
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 6.5e-115 418.3 389 60.4
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 6.5e-115 418.3 393 59.5
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.1e-114 417.5 394 58.4
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.1e-114 417.5 394 58.4
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.5e-114 416.4 389 60.2
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 2.5e-114 416.4 394 60.4
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 2.5e-114 416.4 394 59.6
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 2.5e-114 416.4 394 57.9
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 5.5e-114 415.2 394 58.4
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 2.7e-113 412.9 394 57.4
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 2.7e-113 412.9 394 59.9
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 3.6e-113 412.5 394 58.6
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 3.6e-113 412.5 394 60.4
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 6.1e-113 411.8 396 58.1
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 6.1e-113 411.8 391 59.1
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 6.1e-113 411.8 394 58.4
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 6.1e-113 411.8 390 59.0
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 8.0e-113 411.4 394 58.9
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 8.0e-113 411.4 395 58.7
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 8.0e-113 411.4 395 59.0
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 8.0e-113 411.4 390 58.7
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 1.0e-112 411.0 390 58.7
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.4e-112 410.6 397 58.9
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 1.4e-112 410.6 394 59.4
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 1.4e-112 410.6 394 58.6
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 1.8e-112 410.2 393 58.8
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 2.3e-112 409.8 395 58.5
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 2.3e-112 409.8 394 58.6
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 2.3e-112 409.8 395 58.5
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 3.0e-112 409.5 391 58.3
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 3.0e-112 409.5 394 57.9
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 3.0e-112 409.5 391 58.6
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 3.0e-112 409.5 390 58.7
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 3.0e-112 409.5 391 58.3
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 4.0e-112 409.1 393 58.8
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 4.0e-112 409.1 393 58.0
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 4.0e-112 409.1 397 58.7
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 4.0e-112 409.1 389 58.6
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 5.2e-112 408.7 395 58.5
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 5.2e-112 408.7 395 58.5
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 5.2e-112 408.7 392 61.0
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 5.2e-112 408.7 389 58.6
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 6.8e-112 408.3 397 58.4
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 6.8e-112 408.3 394 58.1
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 6.8e-112 408.3 390 58.2
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 8.8e-112 407.9 394 59.1
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 1.2e-111 407.5 391 58.1
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 1.2e-111 407.5 395 58.0
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 1.2e-111 407.5 390 58.5
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 1.2e-111 407.5 397 58.7
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.2e-111 407.5 392 57.9
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 2.0e-111 406.8 391 58.3
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 2.0e-111 406.8 394 57.4
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 2.6e-111 406.4 390 58.5
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 2.6e-111 406.4 390 58.5
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 2.6e-111 406.4 393 58.5
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 2.6e-111 406.4 394 59.1
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 4.4e-111 405.6 397 58.4
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 5.7e-111 405.2 394 57.1
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 5.7e-111 405.2 395 57.5
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 5.7e-111 405.2 391 58.3
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 7.5e-111 404.8 394 57.1
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.7e-110 403.7 391 56.8
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.7e-110 403.7 391 56.8
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-110 403.7 399 57.1
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 1.7e-110 403.7 394 57.1
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 2.8e-110 402.9 391 58.3
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 4.8e-110 402.1 397 56.9
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 6.3e-110 401.7 394 58.1
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 8.3e-110 401.4 394 57.9
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 8.3e-110 401.4 394 57.9
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 1.4e-109 400.6 391 57.8
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.1e-109 397.9 397 56.4
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 9.1e-109 397.9 397 56.4
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 9.1e-109 397.9 391 56.8
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 9.1e-109 397.9 395 56.7
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 1.2e-108 397.5 391 57.0
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 2.0e-108 396.7 396 57.6
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 2.0e-108 396.7 394 56.1
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.0e-108 396.7 394 57.4
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 2.0e-108 396.7 391 56.8
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 2.0e-108 396.7 380 58.4
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 3.5e-108 396.0 420 57.6
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 4.5e-108 395.6 397 56.2
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 4.5e-108 395.6 397 56.7
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 4.5e-108 395.6 396 57.1
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 5.9e-108 395.2 394 56.3
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 7.7e-108 394.8 396 57.1
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 1.0e-107 394.4 399 57.1
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 1.2e-105 387.5 395 56.7
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.6e-105 387.1 391 57.3
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 2.8e-105 386.3 395 56.5
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 2.8e-105 386.3 397 56.7
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 3.6e-105 386.0 395 56.2
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 3.6e-105 386.0 376 58.5
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 8.0e-105 384.8 394 55.6
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.5e-103 380.6 375 58.4
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 2.0e-103 380.2 375 58.4
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 2.6e-103 379.8 378 57.9
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 2.6e-103 379.8 394 55.1
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 4.4e-103 379.0 378 56.6
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 4.4e-103 379.0 393 55.7
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 1.7e-102 377.1 376 57.2
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 1.7e-102 377.1 375 58.1
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 2.8e-102 376.3 378 57.1
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 8.3e-102 374.8 385 57.4
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.1e-101 374.4 376 55.3
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 4.1e-101 372.5 394 54.3
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 5.4e-101 372.1 397 55.7
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 1.6e-100 370.5 398 54.8
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 1.6e-100 370.5 398 54.8
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 2.7e-100 369.8 281 68.7
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 3.5e-100 369.4 362 59.1
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 3.3e-98 362.8 373 56.8
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 2.8e-97 359.8 282 68.4
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 8.0e-97 358.2 376 55.9
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 1.0e-96 357.8 376 56.4
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 4.0e-96 355.9 388 53.6
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 4.4e-95 352.4 394 52.0
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 2.2e-94 350.1 376 52.7
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 3.7e-94 349.4 281 66.2
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.9e-93 347.1 358 55.0
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 5.4e-93 345.5 358 55.6
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 1.1e-90 337.8 435 48.0
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 1.5e-90 337.4 391 48.6
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.9e-90 337.0 278 65.1
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.2e-89 334.3 389 48.1
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 1.2e-87 327.8 262 65.3
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 2.6e-87 326.6 349 55.3
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 9.8e-87 324.7 258 65.5
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 9.8e-87 324.7 348 55.7
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.2e-84 317.8 430 47.9
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 1.1e-82 311.2 391 48.8
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 2.1e-81 307.0 390 45.4
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 5.8e-79 298.9 378 50.3
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 1.7e-78 297.4 257 60.7
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 6.0e-76 288.9 236 63.6
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 8.1e-73 278.5 366 47.5
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-65 253.4 239 56.1
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-64 250.4 351 47.0
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.7e-60 236.9 256 53.5
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 6.2e-49 199.1 381 38.8
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 2.9e-46 190.3 366 33.6
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 1.6e-44 184.5 349 40.1
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 5.0e-38 162.9 102 78.4
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 5.0e-38 162.9 102 78.4
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 2.7e-36 157.1 216 48.6
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 4.1e-24 116.7 191 41.4
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 2.9e-22 110.5 156 46.8
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 2.3e-19 100.9 61 73.8
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 3.1e-16 90.5 48 83.3
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 5.9e-15 86.3 146 39.0
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 5.9e-15 86.3 146 39.0
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 1.2e-12 78.6 52 67.3
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 5.2e-11 73.2 89 53.9
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 5.2e-11 73.2 89 53.9
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 6.3e-09 66.2 41 73.2
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 6.3e-09 66.2 41 73.2
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 3.8e-06 57.0 40 65.0
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 3.8e-06 57.0 35 77.1


User provided reference genes

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