Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 4.0e-105 384.8 196 100.0
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 7.3e-83 310.8 224 76.3
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 1.2e-74 283.5 328 54.0
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 1.8e-33 146.7 168 56.5
vmacro01705 Vaccinium macrocarpon HOM05D002143 ORTHO05D002260 3.9e-20 102.4 67 85.1
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 2.4e-17 93.2 71 76.1
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.7e-15 87.0 140 45.7
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 5.0e-15 85.5 40 97.5
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 6.5e-15 85.1 43 90.7
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 8.5e-15 84.7 48 81.2
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 1.9e-14 83.6 73 63.0
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 1.9e-14 83.6 44 84.1
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 4.2e-14 82.4 74 58.1
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 4.2e-14 82.4 44 86.4
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 5.5e-14 82.0 41 90.2
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 5.5e-14 82.0 48 79.2
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 7.2e-14 81.6 76 57.9
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 7.2e-14 81.6 48 77.1
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 7.2e-14 81.6 43 86.0
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 7.2e-14 81.6 43 86.0
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 7.2e-14 81.6 47 76.6
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 7.2e-14 81.6 47 76.6
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 7.2e-14 81.6 43 86.0
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 7.2e-14 81.6 47 76.6
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 9.4e-14 81.3 39 92.3
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 9.4e-14 81.3 48 72.9
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 9.4e-14 81.3 43 83.7
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 9.4e-14 81.3 43 83.7
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 9.4e-14 81.3 43 83.7
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 9.4e-14 81.3 47 80.9
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 9.4e-14 81.3 43 83.7
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 1.2e-13 80.9 48 75.0
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 1.6e-13 80.5 45 77.8
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 2.1e-13 80.1 47 74.5
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 2.7e-13 79.7 44 81.8
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 2.7e-13 79.7 44 79.5
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 3.6e-13 79.3 44 77.3
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 3.6e-13 79.3 44 77.3
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 3.6e-13 79.3 43 81.4
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 3.6e-13 79.3 65 58.5
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 3.6e-13 79.3 43 81.4
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 4.6e-13 79.0 43 81.4
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 4.6e-13 79.0 44 79.5
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 4.6e-13 79.0 44 77.3
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 4.6e-13 79.0 46 76.1
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 4.6e-13 79.0 43 81.4
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 6.1e-13 78.6 43 79.1
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 6.1e-13 78.6 43 81.4
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 6.1e-13 78.6 43 83.7
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 6.1e-13 78.6 43 81.4
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 6.1e-13 78.6 43 81.4
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 6.1e-13 78.6 43 81.4
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 7.9e-13 78.2 44 77.3
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 7.9e-13 78.2 47 74.5
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 1.0e-12 77.8 43 79.1
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.0e-12 77.8 179 36.3
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 1.0e-12 77.8 43 79.1
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 1.0e-12 77.8 47 74.5
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 1.4e-12 77.4 42 81.0
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 1.4e-12 77.4 43 81.4
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 1.4e-12 77.4 47 74.5
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 1.8e-12 77.0 47 74.5
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 1.8e-12 77.0 43 76.7
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 2.3e-12 76.6 41 80.5
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 2.3e-12 76.6 43 81.4
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 2.3e-12 76.6 43 81.4
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 3.0e-12 76.3 44 75.0
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 3.0e-12 76.3 44 75.0
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 3.0e-12 76.3 173 37.6
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 3.0e-12 76.3 44 75.0
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 3.9e-12 75.9 42 76.2
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 3.9e-12 75.9 47 72.3
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 5.1e-12 75.5 43 79.1
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 6.7e-12 75.1 43 76.7
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 6.7e-12 75.1 48 68.8
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 6.7e-12 75.1 47 70.2
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 6.7e-12 75.1 40 85.0
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 6.7e-12 75.1 44 72.7
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 8.8e-12 74.7 44 75.0
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 8.8e-12 74.7 44 72.7
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 8.8e-12 74.7 44 72.7
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 8.8e-12 74.7 47 70.2
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 8.8e-12 74.7 43 76.7
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 8.8e-12 74.7 44 72.7
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 8.8e-12 74.7 43 79.1
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 8.8e-12 74.7 43 79.1
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 8.8e-12 74.7 41 82.9
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 8.8e-12 74.7 41 82.9
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 1.1e-11 74.3 44 75.0
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 1.1e-11 74.3 39 82.1
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 1.5e-11 73.9 47 70.2
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 1.5e-11 73.9 48 64.6
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 1.5e-11 73.9 43 76.7
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 2.0e-11 73.6 44 72.7
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 2.5e-11 73.2 47 68.1
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 2.5e-11 73.2 64 54.7
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 2.5e-11 73.2 47 68.1
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 2.5e-11 73.2 44 70.5
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 3.3e-11 72.8 43 74.4
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 3.3e-11 72.8 43 74.4
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 4.3e-11 72.4 179 34.6
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 7.4e-11 71.6 47 66.0
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 7.4e-11 71.6 65 50.8
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 7.4e-11 71.6 65 50.8
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 7.4e-11 71.6 65 50.8
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 9.7e-11 71.2 178 37.6
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 1.7e-10 70.5 44 70.5
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 2.2e-10 70.1 43 69.8
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 2.2e-10 70.1 43 69.8
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 2.2e-10 70.1 43 69.8
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 3.7e-10 69.3 47 63.8
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 6.3e-10 68.6 44 68.2
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 1.8e-09 67.0 67 55.2
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 1.8e-09 67.0 39 76.9
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 3.1e-09 66.2 181 33.7
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 3.1e-09 66.2 43 74.4
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 1.7e-07 60.5 68 52.9
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 2.9e-07 59.7 31 83.9
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 3.8e-07 59.3 45 64.4
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 1.1e-06 57.8 164 32.9
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.4e-06 57.4 175 33.1
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 2.5e-06 56.6 179 29.6
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 3.2e-06 56.2 181 30.4
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 3.2e-06 56.2 181 33.1
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 4.2e-06 55.8 44 68.2
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 4.2e-06 55.8 44 68.2
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 4.2e-06 55.8 30 80.0
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 9.4e-06 54.7 44 65.9
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 9.4e-06 54.7 44 65.9
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 9.4e-06 54.7 44 65.9
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 9.4e-06 54.7 44 65.9
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 9.4e-06 54.7 44 65.9
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 9.4e-06 54.7 44 65.9


User provided reference genes

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