Gene: PSO170G1401
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO170G1401
- Transcript Identifier PSO170G1401.01
- Gene Type Coding gene
- Location NC_039360.1 : 12766243-12768713 : positive
Gene Family Information
- ID HOM05D006016
- #Genes/#Species 131/93
- Phylogenetic origin
- ID ORTHO05D007553
- #Genes/#Species 129/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026598161.1
- pid XP_026453946.1
- id gene-LOC113355330
Descriptions
- product protein PALE CRESS, chloroplastic-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | AT2G48120 |
| GO:0071482 | ISO | PLAZA Integrative Orthology | cellular response to light stimulus | AT2G48120 |
| GO:0009965 | ISO | PLAZA Integrative Orthology | leaf morphogenesis | AT2G48120 |
| GO:0042254 | ISO | PLAZA Integrative Orthology | ribosome biogenesis | AT2G48120 |
| GO:0016117 | ISO | PLAZA Integrative Orthology | carotenoid biosynthetic process | AT2G48120 |
| GO:0048366 | IEA | InterPro | leaf development | |
| GO:0010239 | IEA | InterPro | chloroplast mRNA processing | |
| GO:0009658 | IEA | InterPro | chloroplast organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT2G48120 |
| GO:0019843 | ISO | PLAZA Integrative Orthology | rRNA binding | AT2G48120 |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT2G48120 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G48120 |
| GO:0009509 | ISO | PLAZA Integrative Orthology | chromoplast | AT2G48120 |
| GO:0009513 | ISO | PLAZA Integrative Orthology | etioplast | AT2G48120 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT2G48120 |
| GO:0009536 | IEA | InterPro | plastid | |
| GO:0009537 | ISO | PLAZA Integrative Orthology | proplastid | AT2G48120 |
| GO:0009501 | ISO | PLAZA Integrative Orthology | amyloplast | AT2G48120 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT2G48120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034563 | Protein PALE CRESS |
| Mapman id | Description |
|---|---|
| 17.7.2.3.2 | Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (PAC) |