Gene: HPP92_028347
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_028347
- Transcript Identifier Vpl_s455Ag28347.1
- Gene Type Coding gene
- Location JADCNL010000468.1 : 303-18719 : positive
Gene Family Information
- ID HOM05D005445
- #Genes/#Species 140/97
- Phylogenetic origin
- ID ORTHO05D007043
- #Genes/#Species 135/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Vpl_s455Ag28347.1
- pid KAG0447444.1
Descriptions
- Description Regulatory particle non-ATPase 13 ***
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G26590 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038108 | RPN13, DEUBAD domain superfamily |
| IPR016177 | DNA-binding domain superfamily |
| IPR044868 | Rpn13/ADRM1, Pru domain |
| IPR006773 | Proteasomal ubiquitin receptor Rpn13/ADRM1 |
| IPR032368 | RPN13, DEUBAD domain |
| IPR001739 | Methyl-CpG DNA binding |
| IPR038633 | Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamily |
| Mapman id | Description |
|---|---|
| 12.5.4.1 | Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD1-4/12) |
| 19.2.5.2.2.12 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN13 |