Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03916 Vaccinium macrocarpon HOM05D004616 ORTHO05D005860 1.0e-82 310.1 159 100.0
vmacro03875 Vaccinium macrocarpon HOM05D004616 ORTHO05D005860 1.1e-76 290.0 184 85.3
vmacro03327 Vaccinium macrocarpon HOM05D004616 ORTHO05D005860 4.0e-15 85.5 53 83.0
Rhsim13G0113400 Rhododendron simsii HOM05D004616 ORTHO05D005860 9.0e-15 84.3 58 81.0
CSS0027671 Camellia sinensis var. sinensis HOM05D004616 ORTHO05D005860 3.4e-14 82.4 58 74.1
Nn6g34808 Nelumbo nucifera HOM05D004616 ORTHO05D005860 3.4e-14 82.4 76 57.9
CSS0010321 Camellia sinensis var. sinensis HOM05D004616 ORTHO05D005860 4.4e-14 82.0 99 49.5
QL01p011880 Quercus lobata HOM05D004616 ORTHO05D005860 5.8e-14 81.6 78 61.5
Cfa009990 Carpinus fangiana HOM05D004616 ORTHO05D005860 7.6e-14 81.3 66 69.7
Sabra09G0125300 Salix brachista HOM05D004616 ORTHO05D005860 1.3e-13 80.5 70 65.7
Manes.11G164000 Manihot esculenta HOM05D004616 ORTHO05D005860 1.7e-13 80.1 77 61.0
Thecc.09G279200 Theobroma cacao HOM05D004616 ORTHO05D005860 2.2e-13 79.7 76 60.5
Haze_23351 Corylus avellana HOM05D004616 ORTHO05D005860 2.9e-13 79.3 85 56.5
Nitab4.5_0000731g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 2.9e-13 79.3 77 61.0
CAN.G745.9 Capsicum annuum HOM05D004616 ORTHO05D005860 3.8e-13 79.0 77 61.0
Nitab4.5_0008177g0040 Nicotiana tabacum HOM05D004616 ORTHO05D005860 3.8e-13 79.0 77 61.0
Actinidia07256 Actinidia chinensis HOM05D004616 ORTHO05D005860 4.9e-13 78.6 53 79.2
TAR623G1480 Trochodendron aralioides HOM05D004616 ORTHO05D005860 4.9e-13 78.6 59 72.9
Prupe.6G135500 Prunus persica HOM05D004616 ORTHO05D005860 6.4e-13 78.2 94 53.2
Lj3g0004055 Lotus japonicus HOM05D004616 ORTHO05D005860 8.4e-13 77.8 97 54.6
Peaxi162Scf00224g00117 Petunia axillaris HOM05D004616 ORTHO05D005860 8.4e-13 77.8 77 59.7
Glyma.12G091600 Glycine max HOM05D004616 ORTHO05D005860 1.1e-12 77.4 114 48.2
Nitab4.5_0000937g0090 Nicotiana tabacum HOM05D004616 ORTHO05D005860 1.1e-12 77.4 58 74.1
Lalb_Chr01g0004921 Lupinus albus HOM05D004616 ORTHO05D005860 1.4e-12 77.0 87 56.3
Glyma.11G181500 Glycine max HOM05D004616 ORTHO05D005860 1.9e-12 76.6 114 48.2
SGA_v2.0_scaffold100G29603 Striga asiatica HOM05D004616 ORTHO05D005860 1.9e-12 76.6 80 57.5
Actinidia24228 Actinidia chinensis HOM05D004616 ORTHO05D005860 2.4e-12 76.3 51 78.4
Cc01_g08850 Coffea canephora HOM05D004616 ORTHO05D005860 2.4e-12 76.3 77 58.4
Eucgr.B03827 Eucalyptus grandis HOM05D004616 ORTHO05D005860 2.4e-12 76.3 78 59.0
Solyc11g068660.2 Solanum lycopersicum HOM05D004616 ORTHO05D005860 2.4e-12 76.3 77 58.4
Sopen11g027380 Solanum pennellii HOM05D004616 ORTHO05D005860 2.4e-12 76.3 77 58.4
FAN11G2307 Fragaria x ananassa HOM05D004616 ORTHO05D005860 3.2e-12 75.9 61 67.2
Gohir.A09G096900 Gossypium hirsutum HOM05D004616 ORTHO05D005860 3.2e-12 75.9 58 74.1
Gohir.D09G096700 Gossypium hirsutum HOM05D004616 ORTHO05D005860 3.2e-12 75.9 58 74.1
GSVIVG01036084001 Vitis vinifera HOM05D004616 ORTHO05D005860 3.2e-12 75.9 75 60.0
Potri.004G196800 Populus trichocarpa HOM05D004616 ORTHO05D005860 4.2e-12 75.5 58 72.4
Atru.chr3.3173 Acer truncatum HOM05D004616 ORTHO05D005860 5.4e-12 75.1 79 55.7
CiPaw.14G098200 Carya illinoinensis HOM05D004616 ORTHO05D005860 5.4e-12 75.1 59 72.9
Ciclev10018416m.g Citrus clementina HOM05D004616 ORTHO05D005860 5.4e-12 75.1 77 59.7
Manes.04G001500 Manihot esculenta HOM05D004616 ORTHO05D005860 5.4e-12 75.1 58 72.4
Potri.009G160100 Populus trichocarpa HOM05D004616 ORTHO05D005860 5.4e-12 75.1 60 70.0
PGSC0003DMG400026348 Solanum tuberosum HOM05D004616 ORTHO05D005860 5.4e-12 75.1 77 57.1
TAR633G1321 Trochodendron aralioides HOM05D004616 ORTHO05D005860 7.1e-12 74.7 59 71.2
Aqoxy2G01054 Aquilegia oxysepala HOM05D004616 ORTHO05D005860 9.3e-12 74.3 59 69.5
MSTRG.18768 Avicennia marina HOM05D004616 ORTHO05D005860 9.3e-12 74.3 73 60.3
Duzib168G0483 Durio zibethinus HOM05D004616 ORTHO05D005860 9.3e-12 74.3 77 58.4
Sabra04G0133400 Salix brachista HOM05D004616 ORTHO05D005860 9.3e-12 74.3 58 70.7
SGA_v2.0_scaffold22G09840 Striga asiatica HOM05D004616 ORTHO05D005860 9.3e-12 74.3 87 55.2
Oeu031468.1 Olea europaea HOM05D004616 ORTHO05D005860 1.2e-11 73.9 57 73.7
ATR0820G275 Amborella trichopoda HOM05D004616 ORTHO05D005860 1.6e-11 73.6 78 56.4
ECA233G2149 Erigeron canadensis HOM05D004616 ORTHO05D005860 1.6e-11 73.6 94 53.2
FvH4_3g25610 Fragaria vesca HOM05D004616 ORTHO05D005860 1.6e-11 73.6 78 53.8
FAN21G3247 Fragaria x ananassa HOM05D004616 ORTHO05D005860 1.6e-11 73.6 78 53.8
Gorai.006G113400 Gossypium raimondii HOM05D004616 ORTHO05D005860 1.6e-11 73.6 58 72.4
FAN25G2905 Fragaria x ananassa HOM05D004616 ORTHO05D005860 2.1e-11 73.2 78 53.8
RcHm_v2.0_Chr5g0045751 Rosa chinensis HOM05D004616 ORTHO05D005860 2.7e-11 72.8 79 55.7
Lj3g0000295 Lotus japonicus HOM05D004616 ORTHO05D005860 3.5e-11 72.4 58 69.0
AUR62001524 Chenopodium quinoa HOM05D004616 ORTHO05D005860 4.6e-11 72.0 77 57.1
AUR62020259 Chenopodium quinoa HOM05D004616 ORTHO05D005860 4.6e-11 72.0 77 57.1
Lj2A968G32 Lonicera japonica HOM05D004616 ORTHO05D005860 4.6e-11 72.0 59 72.9
TWI79G0721 Tripterygium wilfordii HOM05D004616 ORTHO05D005860 4.6e-11 72.0 57 70.2
Dinv08937 Davidia involucrata HOM05D004616 ORTHO05D005860 6.0e-11 71.6 72 58.3
HanXRQChr13g0397601 Helianthus annuus HOM05D004616 ORTHO05D005860 6.0e-11 71.6 76 57.9
EL10Ac7g16331 Beta vulgaris HOM05D004616 ORTHO05D005860 7.9e-11 71.2 58 69.0
VMungo1127G2084 Vigna mungo HOM05D004616 ORTHO05D005860 7.9e-11 71.2 78 57.7
Ah.08g223540 Amaranthus hybridus HOM05D004616 ORTHO05D005860 1.0e-10 70.9 77 55.8
CDE08G0566 Ceratophyllum demersum HOM05D004616 ORTHO05D005860 1.0e-10 70.9 77 55.8
Solyc06g074220.3 Solanum lycopersicum HOM05D004616 ORTHO05D005860 1.0e-10 70.9 58 70.7
Sopen06g030640 Solanum pennellii HOM05D004616 ORTHO05D005860 1.0e-10 70.9 58 70.7
Nitab4.5_0005472g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 1.3e-10 70.5 72 56.9
Peaxi162Scf00091g00076 Petunia axillaris HOM05D004616 ORTHO05D005860 1.3e-10 70.5 62 64.5
Phvul.011G096000 Phaseolus vulgaris HOM05D004616 ORTHO05D005860 1.3e-10 70.5 62 67.7
FAN16G2710 Fragaria x ananassa HOM05D004616 ORTHO05D005860 1.7e-10 70.1 77 51.9
PGR102G3030 Punica granatum HOM05D004616 ORTHO05D005860 1.7e-10 70.1 76 55.3
Ca_01648_v3 Cicer arietinum L. HOM05D004616 ORTHO05D005860 2.3e-10 69.7 58 70.7
DCAR_012213 Daucus carota HOM05D004616 ORTHO05D005860 2.3e-10 69.7 75 56.0
MD03G1149500 Malus domestica HOM05D004616 ORTHO05D005860 3.0e-10 69.3 77 58.4
MD11G1168400 Malus domestica HOM05D004616 ORTHO05D005860 3.0e-10 69.3 77 58.4
arahy.Tifrunner.gnm1.ann1.38CPMH Arachis hypogaea HOM05D004616 ORTHO05D005860 3.9e-10 68.9 67 59.7
Duzib150G0968 Durio zibethinus HOM05D004616 ORTHO05D005860 3.9e-10 68.9 72 56.9
Lsat_1_v5_gn_6_38401 Lactuca sativa HOM05D004616 ORTHO05D005860 3.9e-10 68.9 79 51.9
SEGI_03435 Sequoiadendron giganteum HOM05D004616 ORTHO05D005860 3.9e-10 68.9 57 68.4
PGSC0003DMG400005888 Solanum tuberosum HOM05D004616 ORTHO05D005860 3.9e-10 68.9 57 70.2
COL.COLO4_34009 Corchorus olitorius HOM05D004616 ORTHO05D005860 5.1e-10 68.6 72 56.9
TWI75G1519 Tripterygium wilfordii HOM05D004616 ORTHO05D005860 5.1e-10 68.6 55 69.1
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 5.1e-10 68.6 116 45.7
arahy.Tifrunner.gnm1.ann1.TN2AAQ Arachis hypogaea HOM05D004616 ORTHO05D005860 8.7e-10 67.8 62 62.9
CANSAT54G1125 Cannabis sativa HOM05D004616 ORTHO05D005860 8.7e-10 67.8 77 54.5
Migut.D02430 Erythranthe guttata HOM05D004616 ORTHO05D005860 8.7e-10 67.8 72 55.6
Medtr2g086780 Medicago truncatula HOM05D004616 ORTHO05D005860 1.5e-09 67.0 58 69.0
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 1.5e-09 67.0 96 47.9
Psat5g257760 Pisum sativum HOM05D004616 ORTHO05D005860 1.9e-09 66.6 79 53.2
Hund20933 Selenicereus undatus HOM05D004616 ORTHO05D005860 2.5e-09 66.2 72 55.6
MELO3C004671.2 Cucumis melo HOM05D004616 ORTHO05D005860 3.3e-09 65.9 58 65.5
CsaV3_1G015050 Cucumis sativus L. HOM05D004616 ORTHO05D005860 3.3e-09 65.9 58 65.5
PSO339G4556 Papaver somniferum HOM05D004616 ORTHO05D005860 3.3e-09 65.9 59 66.1
Dinv22821 Davidia involucrata HOM05D004616 ORTHO05D005860 5.6e-09 65.1 72 56.9
PSO801G0782 Papaver somniferum HOM05D004616 ORTHO05D005860 5.6e-09 65.1 58 65.5
Sed0016133 Sechium edule HOM05D004616 ORTHO05D005860 5.6e-09 65.1 58 65.5
unitig_899.g14957 Utricularia gibba HOM05D004616 ORTHO05D005860 5.6e-09 65.1 78 53.8
HPP92_001102 Vanilla planifolia HOM05D004616 ORTHO05D005860 5.6e-09 65.1 56 64.3
CSS0008379 Camellia sinensis var. sinensis HOM05D004616 ORTHO05D005860 7.3e-09 64.7 72 55.6
Os04g0414100 Oryza sativa ssp. japonica HOM05D004616 ORTHO05D005860 9.6e-09 64.3 83 50.6
Mapoly0015s0108 Marchantia polymorpha HOM05D004616 ORTHO05D005860 8.1e-08 61.2 62 53.2
CAN.G919.39 Capsicum annuum HOM05D004616 ORTHO05D005860 1.1e-07 60.8 54 66.7
Hund18773 Selenicereus undatus HOM05D004616 ORTHO05D005860 2.4e-07 59.7 78 47.4
Carub.0004s0797 Capsella rubella HOM05D004616 ORTHO05D005860 3.1e-07 59.3 58 60.3
BcaB01g03068 Brassica carinata HOM05D004616 ORTHO05D005860 4.0e-07 58.9 82 48.8
CARHR119940 Cardamine hirsuta HOM05D004616 ORTHO05D005860 4.0e-07 58.9 58 56.9
Thhalv10001965m.g Eutrema salsugineum HOM05D004616 ORTHO05D005860 5.3e-07 58.5 57 59.6
AL4G21290 Arabidopsis lyrata HOM05D004616 ORTHO05D005860 6.9e-07 58.2 58 58.6
Sp4g10140 Schrenkiella parvula HOM05D004616 ORTHO05D005860 6.9e-07 58.2 57 59.6
THA.LOC104826435 Tarenaya hassleriana HOM05D004616 ORTHO05D005860 2.6e-06 56.2 58 60.3
Pp3c7_5530 Physcomitrium patens HOM05D004616 ORTHO05D005860 5.8e-06 55.1 59 52.5


User provided reference genes

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