Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03340 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 0.0e+00 1149.4 589 100.0
vmacro17076 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.7e-308 1062.0 589 94.1
Rhsim05G0001900 Rhododendron simsii HOM05D004857 ORTHO05D005663 2.0e-298 1028.5 589 91.0
Actinidia39614 Actinidia chinensis HOM05D004857 ORTHO05D005663 3.0e-273 944.9 593 84.0
CSS0030162 Camellia sinensis var. sinensis HOM05D004857 ORTHO05D005663 4.3e-272 941.0 590 83.6
Dinv44702 Davidia involucrata HOM05D004857 ORTHO05D005663 8.1e-271 936.8 581 83.8
GSVIVG01015011001 Vitis vinifera HOM05D004857 ORTHO05D005663 4.6e-258 894.4 590 79.3
TAR383G0334 Trochodendron aralioides HOM05D004857 ORTHO05D005663 1.3e-257 892.9 584 80.5
Nn7g37725 Nelumbo nucifera HOM05D004857 ORTHO05D005663 1.7e-252 875.9 590 78.0
Lj4A920T60 Lonicera japonica HOM05D004857 ORTHO05D005663 2.5e-251 872.1 597 78.6
Thecc.09G070000 Theobroma cacao HOM05D004857 ORTHO05D005663 3.2e-251 871.7 588 77.7
Manes.16G090200 Manihot esculenta HOM05D004857 ORTHO05D005663 9.3e-251 870.2 590 78.5
Actinidia30259 Actinidia chinensis HOM05D004857 ORTHO05D005663 1.0e-249 866.7 547 84.1
MBI19_g37995_MAGBIO Magnolia biondii HOM05D004857 ORTHO05D005663 3.9e-249 864.8 584 76.5
QL11p002992 Quercus lobata HOM05D004857 ORTHO05D005663 1.6e-247 859.4 583 77.7
Cc06_g12730 Coffea canephora HOM05D004857 ORTHO05D005663 1.4e-246 856.3 588 76.4
Gohir.A05G036200 Gossypium hirsutum HOM05D004857 ORTHO05D005663 1.4e-246 856.3 588 75.9
Phvul.009G223400 Phaseolus vulgaris HOM05D004857 ORTHO05D005663 5.3e-246 854.4 588 77.2
Cfa002936 Carpinus fangiana HOM05D004857 ORTHO05D005663 1.5e-245 852.8 588 76.2
CiPaw.03G200100 Carya illinoinensis HOM05D004857 ORTHO05D005663 1.5e-245 852.8 574 78.2
Duzib168G0723 Durio zibethinus HOM05D004857 ORTHO05D005663 2.6e-245 852.0 588 76.9
Gorai.009G038200 Gossypium raimondii HOM05D004857 ORTHO05D005663 5.9e-245 850.9 588 75.3
VMungo1309G0172 Vigna mungo HOM05D004857 ORTHO05D005663 1.0e-244 850.1 588 76.9
Gohir.D05G037700 Gossypium hirsutum HOM05D004857 ORTHO05D005663 5.0e-244 847.8 588 75.2
Ca_02281_v3 Cicer arietinum L. HOM05D004857 ORTHO05D005663 3.2e-243 845.1 583 75.5
Eucgr.C00765 Eucalyptus grandis HOM05D004857 ORTHO05D005663 4.2e-243 844.7 592 76.2
Lj6g0010651 Lotus japonicus HOM05D004857 ORTHO05D005663 4.2e-243 844.7 581 77.1
Nitab4.5_0001114g0050 Nicotiana tabacum HOM05D004857 ORTHO05D005663 1.6e-242 842.8 591 76.8
Aqoxy6G02713 Aquilegia oxysepala HOM05D004857 ORTHO05D005663 2.1e-242 842.4 589 74.7
Glyma.15G183100 Glycine max HOM05D004857 ORTHO05D005663 2.1e-242 842.4 588 75.2
MD15G1223900 Malus domestica HOM05D004857 ORTHO05D005663 2.1e-242 842.4 593 75.2
Sabra18G0057000 Salix brachista HOM05D004857 ORTHO05D005663 2.1e-242 842.4 590 75.6
Ciclev10007866m.g Citrus clementina HOM05D004857 ORTHO05D005663 2.7e-242 842.0 581 76.6
Nitab4.5_0002665g0010 Nicotiana tabacum HOM05D004857 ORTHO05D005663 1.3e-241 839.7 591 76.5
Duzib187G1561 Durio zibethinus HOM05D004857 ORTHO05D005663 4.3e-240 834.7 588 74.7
MSTRG.19426 Avicennia marina HOM05D004857 ORTHO05D005663 7.4e-240 833.9 590 75.3
CANSAT56G1105 Cannabis sativa HOM05D004857 ORTHO05D005663 1.3e-239 833.2 592 74.0
Lalb_Chr08g0232851 Lupinus albus HOM05D004857 ORTHO05D005663 1.3e-239 833.2 581 76.1
Potri.018G064100 Populus trichocarpa HOM05D004857 ORTHO05D005663 1.6e-239 832.8 588 75.2
Psat1g138640 Pisum sativum HOM05D004857 ORTHO05D005663 8.2e-239 830.5 583 75.6
COL.COLO4_21204 Corchorus olitorius HOM05D004857 ORTHO05D005663 2.4e-238 828.9 609 73.2
Glyma.09G074100 Glycine max HOM05D004857 ORTHO05D005663 4.1e-238 828.2 588 75.2
arahy.Tifrunner.gnm1.ann1.N970BB Arachis hypogaea HOM05D004857 ORTHO05D005663 5.3e-238 827.8 595 74.6
MELO3C009580.2 Cucumis melo HOM05D004857 ORTHO05D005663 5.3e-238 827.8 589 75.2
MD02G1102700 Malus domestica HOM05D004857 ORTHO05D005663 6.9e-238 827.4 596 73.8
PGR142G2122 Punica granatum HOM05D004857 ORTHO05D005663 1.5e-237 826.2 592 74.3
PGSC0003DMG401015931 Solanum tuberosum HOM05D004857 ORTHO05D005663 1.5e-237 826.2 592 75.0
arahy.Tifrunner.gnm1.ann1.N9ATPP Arachis hypogaea HOM05D004857 ORTHO05D005663 2.0e-237 825.9 595 74.5
Sopen07g006280 Solanum pennellii HOM05D004857 ORTHO05D005663 5.9e-237 824.3 591 74.8
Solyc07g017490.3 Solanum lycopersicum HOM05D004857 ORTHO05D005663 1.7e-236 822.8 591 74.6
CsaV3_3G038370 Cucumis sativus L. HOM05D004857 ORTHO05D005663 2.2e-236 822.4 592 75.2
SalBow6G1194 Salvia bowleyana HOM05D004857 ORTHO05D005663 2.2e-236 822.4 591 75.3
Oeu041809.2 Olea europaea HOM05D004857 ORTHO05D005663 6.5e-236 820.8 654 68.8
Sed0019967 Sechium edule HOM05D004857 ORTHO05D005663 1.1e-235 820.1 589 75.0
TWI34G1843 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 1.1e-235 820.1 592 74.7
CDE05G0310 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 1.9e-235 819.3 590 73.7
CAN.G457.2 Capsicum annuum HOM05D004857 ORTHO05D005663 5.5e-235 817.8 591 74.6
Sc08g0005030 Simmondsia chinensis HOM05D004857 ORTHO05D005663 1.2e-234 816.6 580 74.8
Hund21824 Selenicereus undatus HOM05D004857 ORTHO05D005663 1.6e-234 816.2 580 75.9
Medtr2g044200 Medicago truncatula HOM05D004857 ORTHO05D005663 3.6e-234 815.1 589 74.9
RcHm_v2.0_Chr2g0095991 Rosa chinensis HOM05D004857 ORTHO05D005663 1.3e-231 806.6 587 72.4
FvH4_1g09440 Fragaria vesca HOM05D004857 ORTHO05D005663 4.8e-231 804.7 586 71.5
Migut.J00878 Erythranthe guttata HOM05D004857 ORTHO05D005663 1.1e-230 803.5 569 75.9
TWI32G0792 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 4.1e-230 801.6 595 72.6
FAN19G2563 Fragaria x ananassa HOM05D004857 ORTHO05D005663 2.0e-229 799.3 588 71.3
FAN26G1404 Fragaria x ananassa HOM05D004857 ORTHO05D005663 2.0e-229 799.3 602 70.1
FAN26G0201 Fragaria x ananassa HOM05D004857 ORTHO05D005663 2.6e-229 798.9 588 71.3
FAN28G2840 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.7e-228 796.2 588 70.9
ATR0681G246 Amborella trichopoda HOM05D004857 ORTHO05D005663 1.4e-227 793.1 591 71.1
FAN23G0125 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.4e-227 793.1 588 70.7
Lsat_1_v5_gn_5_138760 Lactuca sativa HOM05D004857 ORTHO05D005663 9.4e-227 790.4 582 73.5
Oeu000275.2 Olea europaea HOM05D004857 ORTHO05D005663 2.3e-225 785.8 756 60.1
THA.LOC104819454 Tarenaya hassleriana HOM05D004857 ORTHO05D005663 2.3e-225 785.8 585 71.8
ClCG10G017920 Citrullus lanatus HOM05D004857 ORTHO05D005663 8.2e-223 777.3 693 64.2
PSO104G0255 Papaver somniferum HOM05D004857 ORTHO05D005663 5.3e-222 774.6 597 70.5
EL10Ac4g09573 Beta vulgaris HOM05D004857 ORTHO05D005663 9.1e-222 773.9 602 69.9
CDE05G0890 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 4.5e-221 771.5 578 71.5
DCAR_024780 Daucus carota HOM05D004857 ORTHO05D005663 6.1e-218 761.1 600 70.0
AUR62006828 Chenopodium quinoa HOM05D004857 ORTHO05D005663 1.2e-216 756.9 580 70.7
HPP92_017869 Vanilla planifolia HOM05D004857 ORTHO05D005663 2.6e-216 755.7 585 69.6
arahy.Tifrunner.gnm1.ann1.I7JLU4 Arachis hypogaea HOM05D004857 ORTHO05D005663 2.2e-215 752.7 595 70.8
Sp4g07340 Schrenkiella parvula HOM05D004857 ORTHO05D005663 1.1e-214 750.4 572 69.6
SHI27983 Sapria himalayana HOM05D004857 ORTHO05D005663 1.4e-214 750.0 601 68.1
PSO421G0319 Papaver somniferum HOM05D004857 ORTHO05D005663 1.2e-213 746.9 607 68.5
Aa31LG5G9410 Aethionema arabicum HOM05D004857 ORTHO05D005663 1.6e-213 746.5 596 66.3
Prupe.7G191600 Prunus persica HOM05D004857 ORTHO05D005663 7.7e-213 744.2 533 74.9
HanXRQChr12g0355141 Helianthus annuus HOM05D004857 ORTHO05D005663 5.0e-212 741.5 591 70.4
BcaC07g40818 Brassica carinata HOM05D004857 ORTHO05D005663 8.5e-212 740.7 585 68.9
C08p38110 Brassica napus HOM05D004857 ORTHO05D005663 8.5e-212 740.7 585 68.9
BolC8t51386H Brassica oleracea HOM05D004857 ORTHO05D005663 8.5e-212 740.7 585 68.9
Carub.0004s0646 Capsella rubella HOM05D004857 ORTHO05D005663 8.5e-212 740.7 573 70.7
Os11g0146700 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 2.5e-211 739.2 566 69.6
Zm00001eb405000 Zea mays HOM05D004857 ORTHO05D005663 2.5e-211 739.2 587 68.8
Thhalv10001246m.g Eutrema salsugineum HOM05D004857 ORTHO05D005663 7.2e-211 737.6 573 68.6
A09p55180 Brassica napus HOM05D004857 ORTHO05D005663 3.6e-210 735.3 585 68.2
BraA09t40926Z Brassica rapa HOM05D004857 ORTHO05D005663 2.3e-209 732.6 585 68.0
AT2G26460 Arabidopsis thaliana HOM05D004857 ORTHO05D005663 5.2e-209 731.5 583 66.9
SGA_v2.0_scaffold31G12698 Striga asiatica HOM05D004857 ORTHO05D005663 6.8e-209 731.1 523 74.6
AUR62000486 Chenopodium quinoa HOM05D004857 ORTHO05D005663 5.7e-208 728.0 572 69.1
AL4G19270 Arabidopsis lyrata HOM05D004857 ORTHO05D005663 7.0e-206 721.1 567 67.9
BcaB08g35315 Brassica carinata HOM05D004857 ORTHO05D005663 1.0e-204 717.2 589 65.9
TPR.G27074 Trifolium pratense HOM05D004857 ORTHO05D005663 5.5e-203 711.4 516 72.5
CARHR114530 Cardamine hirsuta HOM05D004857 ORTHO05D005663 4.5e-197 691.8 571 66.2
Peaxi162Scf01184g10017 Petunia axillaris HOM05D004857 ORTHO05D005663 3.6e-194 682.2 593 66.3
SEGI_40202 Sequoiadendron giganteum HOM05D004857 ORTHO05D005663 1.6e-189 666.8 585 63.9
Os12g0143400 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 2.7e-189 666.0 588 64.1
Zm00001eb163350 Zea mays HOM05D004857 ORTHO05D005663 7.0e-182 641.3 506 68.2
Haze_26072 Corylus avellana HOM05D004857 ORTHO05D005663 2.3e-177 626.3 434 74.9
Mapoly0117s0005 Marchantia polymorpha HOM05D004857 ORTHO05D005663 4.3e-171 605.5 597 58.1
Cpa.g.sc82.61 Carica papaya HOM05D004857 ORTHO05D005663 3.7e-146 522.7 399 70.9
CBR_g41264 Chara braunii HOM05D004857 ORTHO05D005663 8.7e-140 501.5 612 51.0
SMO266G0005 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 1.1e-139 501.1 627 50.6
BcaB08g35309 Brassica carinata HOM05D004857 ORTHO05D005663 7.6e-136 488.4 517 55.7
BcaB08g35312 Brassica carinata HOM05D004857 ORTHO05D005663 7.6e-136 488.4 517 55.7
BcaB08g35314 Brassica carinata HOM05D004857 ORTHO05D005663 7.6e-136 488.4 517 55.7
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis HOM05D004857 ORTHO05D005663 7.2e-126 455.3 483 56.1
ECA234G2807 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.1e-123 448.0 366 67.8
Atru.chr7.1770 Acer truncatum HOM05D004857 ORTHO05D005663 3.6e-117 426.4 277 78.3
BcaB08g35308 Brassica carinata HOM05D004857 ORTHO05D005663 5.9e-88 329.3 251 71.7
ECA234G1433 Erigeron canadensis HOM05D000959 ORTHO05D000775 5.9e-88 329.3 251 70.9
Lsat_1_v5_gn_7_48600 Lactuca sativa HOM05D004857 ORTHO05D005663 7.0e-81 305.8 209 74.6
Pp3c19_4680 Physcomitrium patens HOM05D004857 ORTHO05D005663 6.6e-79 299.3 360 50.8
unitig_699.g19261 Utricularia gibba HOM05D004857 ORTHO05D005663 1.1e-78 298.5 344 56.1
HanXRQChr12g0354251 Helianthus annuus HOM05D004857 ORTHO05D005663 2.3e-76 290.8 571 40.3
arahy.Tifrunner.gnm1.ann1.97VZCN Arachis hypogaea HOM05D004857 ORTHO05D005663 2.0e-72 277.7 177 79.7
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 3.0e-71 273.9 173 82.1
Cpa.g.sc3709.1 Carica papaya HOM05D004857 ORTHO05D005663 5.6e-70 269.6 158 87.3
BcaB08g35313 Brassica carinata HOM05D004857 ORTHO05D005663 6.8e-68 262.7 270 56.3
Nn2g14232 Nelumbo nucifera HOM05D004857 ORTHO05D005663 7.8e-64 249.2 208 65.9
HanXRQChr12g0355211 Helianthus annuus HOM05D004857 ORTHO05D005663 6.6e-63 246.1 438 39.0
Atru.chr7.1769 Acer truncatum HOM05D004857 ORTHO05D005663 7.5e-59 232.6 170 74.1
TAR626G1635 Trochodendron aralioides HOM05D001862 ORTHO05D005663 3.0e-55 220.7 439 35.8
SMO270G0035 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 1.9e-54 218.0 423 38.8
SMO270G0044 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 1.4e-49 201.8 142 71.1
Lsat_1_v5_gn_5_77280 Lactuca sativa HOM05D004857 ORTHO05D005663 4.3e-46 190.3 175 65.1
CAN.G457.3 Capsicum annuum HOM05D004857 ORTHO05D005663 7.6e-43 179.5 123 81.3
Lsat_1_v5_gn_5_77300 Lactuca sativa HOM05D004857 ORTHO05D005663 1.6e-40 171.8 128 69.5
Cre16.g688750 Chlamydomonas reinhardtii HOM05D004857 ORTHO05D005663 1.7e-39 168.3 593 30.5
Lsat_1_v5_gn_7_48580 Lactuca sativa HOM05D004857 ORTHO05D005663 8.7e-39 166.0 204 52.9
Lsat_1_v5_gn_3_37601 Lactuca sativa HOM05D004857 ORTHO05D005663 1.3e-34 152.1 159 61.0
Dinv32013 Davidia involucrata HOM05D004857 ORTHO05D005663 6.2e-29 133.3 76 86.8
Rhsim09G0048200 Rhododendron simsii HOM05D004857 ORTHO05D005663 3.2e-25 120.9 114 63.2
BcaB08g35310 Brassica carinata HOM05D004857 ORTHO05D005663 1.0e-23 115.9 170 44.7
QL05p089308 Quercus lobata HOM05D004857 ORTHO05D005663 1.1e-22 112.5 69 78.3
TPR.G21223 Trifolium pratense HOM05D004857 ORTHO05D005663 2.1e-21 108.2 58 91.4
Lsat_1_v5_gn_7_64781 Lactuca sativa HOM05D004857 ORTHO05D005663 1.4e-20 105.5 76 69.7
MCO14G054 Micromonas commoda HOM05D004857 ORTHO05D005663 1.4e-20 105.5 182 38.5
CAN.G1728.2 Capsicum annuum HOM05D004857 ORTHO05D005663 5.8e-19 100.1 69 72.5
Actinidia02202 Actinidia chinensis HOM05D004857 ORTHO05D005663 2.2e-18 98.2 66 77.3
TAR626G1095 Trochodendron aralioides HOM05D004857 ORTHO05D005663 6.5e-18 96.7 70 75.7
vmacro05712 Vaccinium macrocarpon HOM05D006033 ORTHO05D005663 6.1e-16 90.1 49 93.9
ECA247G2383 Erigeron canadensis HOM05D004857 ORTHO05D005663 1.3e-15 89.0 87 52.9
BcaB08g35311 Brassica carinata HOM05D004857 ORTHO05D005663 5.1e-15 87.0 114 44.7
PSO832G3983 Papaver somniferum HOM05D004857 ORTHO05D005663 6.3e-13 80.1 87 47.1
Actinidia27556 Actinidia chinensis HOM05D004857 ORTHO05D005663 1.1e-12 79.3 57 73.7
vmacro12720 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.1e-12 79.3 64 70.3
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 2.7e-08 64.7 36 80.6
PSO407G0399 Papaver somniferum HOM05D001929 ORTHO05D002426 1.8e-07 62.0 53 54.7
PSO541G5242 Papaver somniferum HOM05D004857 ORTHO05D005663 6.7e-07 60.1 53 52.8


User provided reference genes

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