Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4031 Utricularia gibba HOM05D002931 ORTHO05D003273 0.0e+00 1170.2 594 100.0
unitig_22.g5616 Utricularia gibba HOM05D002931 ORTHO05D003273 3.8e-191 672.2 597 62.5
Migut.E00661 Erythranthe guttata HOM05D002931 ORTHO05D003273 7.3e-102 375.6 629 42.1
MSTRG.13667 Avicennia marina HOM05D002931 ORTHO05D003273 4.7e-101 372.9 629 41.5
MSTRG.2079 Avicennia marina HOM05D002931 ORTHO05D003273 6.8e-100 369.0 633 42.3
Migut.E00601 Erythranthe guttata HOM05D002931 ORTHO05D003273 3.1e-92 343.6 496 44.6
SalBow2G2773 Salvia bowleyana HOM05D002931 ORTHO05D003273 6.8e-92 342.4 634 40.4
Oeu044053.1 Olea europaea HOM05D002931 ORTHO05D003273 8.1e-77 292.4 643 37.6
Oeu001129.1 Olea europaea HOM05D002931 ORTHO05D003273 1.1e-70 271.9 631 35.8
Nitab4.5_0007973g0010 Nicotiana tabacum HOM05D002931 ORTHO05D003273 5.8e-67 259.6 645 35.3
Oeu006356.1 Olea europaea HOM05D002931 ORTHO05D003273 7.6e-67 259.2 644 35.6
PGSC0003DMG400031374 Solanum tuberosum HOM05D002931 ORTHO05D003273 2.9e-66 257.3 645 34.9
Sopen04g003710 Solanum pennellii HOM05D002931 ORTHO05D003273 3.8e-66 256.9 653 34.9
Nitab4.5_0007743g0010 Nicotiana tabacum HOM05D002931 ORTHO05D003273 9.3e-65 252.3 639 34.3
Cc11_g03200 Coffea canephora HOM05D002931 ORTHO05D003273 2.5e-62 244.2 646 34.2
CSS0049784 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 5.6e-62 243.0 530 37.2
Nitab4.5_0000069g0600 Nicotiana tabacum HOM05D002931 ORTHO05D003273 1.3e-61 241.9 642 33.5
Dinv28150 Davidia involucrata HOM05D002931 ORTHO05D003273 3.7e-61 240.4 685 34.0
COL.COLO4_27513 Corchorus olitorius HOM05D002931 ORTHO05D003273 1.1e-60 238.8 653 32.9
DCAR_002632 Daucus carota HOM05D002931 ORTHO05D003273 2.6e-59 234.2 654 34.4
QL03p041904 Quercus lobata HOM05D002931 ORTHO05D003273 5.8e-59 233.0 669 33.2
Actinidia12422 Actinidia chinensis HOM05D002931 ORTHO05D003273 7.6e-59 232.6 649 33.6
Prupe.1G342700 Prunus persica HOM05D002931 ORTHO05D003273 7.6e-59 232.6 661 33.4
Peaxi162Scf00329g00939 Petunia axillaris HOM05D002931 ORTHO05D003273 9.9e-59 232.3 639 34.1
Atru.chr11.1047 Acer truncatum HOM05D002931 ORTHO05D003273 1.7e-58 231.5 654 32.7
CANSAT64G0742 Cannabis sativa HOM05D002931 ORTHO05D003273 8.4e-58 229.2 671 32.0
Ciclev10004417m.g Citrus clementina HOM05D002931 ORTHO05D003273 2.4e-57 227.6 668 32.8
MD16G1008200 Malus domestica HOM05D002931 ORTHO05D003273 2.4e-57 227.6 653 33.1
DCAR_030328 Daucus carota HOM05D002931 ORTHO05D003273 4.2e-57 226.9 657 34.6
Duzib248G0685 Durio zibethinus HOM05D002931 ORTHO05D003273 3.5e-56 223.8 645 32.2
Thecc.02G296000 Theobroma cacao HOM05D002931 ORTHO05D003273 7.9e-56 222.6 673 32.4
Nitab4.5_0000129g0420 Nicotiana tabacum HOM05D002931 ORTHO05D003273 1.0e-55 222.2 648 32.6
CAN.G458.3 Capsicum annuum HOM05D002931 ORTHO05D003273 2.3e-55 221.1 653 32.0
Duzib251G0035 Durio zibethinus HOM05D002931 ORTHO05D003273 3.3e-54 217.2 658 33.1
Lj6C725G8 Lonicera japonica HOM05D002931 ORTHO05D003273 1.3e-53 215.3 627 33.0
Cfa021253 Carpinus fangiana HOM05D002931 ORTHO05D003273 2.1e-53 214.5 679 30.9
ClCG11G000800 Citrullus lanatus HOM05D002931 ORTHO05D003273 8.2e-53 212.6 648 32.6
CsaV3_5G012550 Cucumis sativus L. HOM05D002931 ORTHO05D003273 8.2e-53 212.6 652 33.4
Sed0006180 Sechium edule HOM05D002931 ORTHO05D003273 8.2e-53 212.6 656 32.8
Solyc04g008550.4 Solanum lycopersicum HOM05D002931 ORTHO05D003273 8.2e-53 212.6 653 32.3
DCAR_023511 Daucus carota HOM05D002931 ORTHO05D003273 3.1e-52 210.7 656 32.5
Glyma.05G135800 Glycine max HOM05D002931 ORTHO05D003273 6.9e-52 209.5 654 32.0
CiPaw.06G057100 Carya illinoinensis HOM05D002931 ORTHO05D003273 1.2e-51 208.8 674 32.9
vmacro10786 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 1.2e-51 208.8 637 32.5
PGSC0003DMG400016400 Solanum tuberosum HOM05D002931 ORTHO05D003273 1.5e-51 208.4 634 31.5
Manes.07G081000 Manihot esculenta HOM05D002931 ORTHO05D003273 3.4e-51 207.2 666 32.6
Solyc01g008170.3 Solanum lycopersicum HOM05D002931 ORTHO05D003273 3.4e-51 207.2 631 31.9
MELO3C022593.2 Cucumis melo HOM05D002931 ORTHO05D003273 5.8e-51 206.5 652 33.4
VMungo0251G1797 Vigna mungo HOM05D002931 ORTHO05D003273 2.9e-50 204.1 654 31.2
Gorai.002G167900 Gossypium raimondii HOM05D002931 ORTHO05D003273 1.4e-49 201.8 659 31.6
Peaxi162Scf00097g01810 Petunia axillaris HOM05D002931 ORTHO05D003273 4.2e-49 200.3 633 32.5
Phvul.002G186300 Phaseolus vulgaris HOM05D002931 ORTHO05D003273 4.2e-49 200.3 653 30.6
Hund04302 Selenicereus undatus HOM05D002931 ORTHO05D003273 5.5e-49 199.9 665 30.7
Dinv06218 Davidia involucrata HOM05D002931 ORTHO05D003273 7.1e-49 199.5 649 32.7
Glyma.08G091000 Glycine max HOM05D002931 ORTHO05D003273 1.6e-48 198.4 651 31.3
SGA_v2.0_scaffold65G22206 Striga asiatica HOM05D002931 ORTHO05D003273 1.6e-48 198.4 612 31.0
Potri.008G144200 Populus trichocarpa HOM05D002931 ORTHO05D003273 2.1e-48 198.0 672 31.4
Sopen01g003710 Solanum pennellii HOM05D002931 ORTHO05D003273 4.6e-48 196.8 632 31.0
RcHm_v2.0_Chr7g0176801 Rosa chinensis HOM05D002931 ORTHO05D003273 6.0e-48 196.4 677 30.9
SGA_v2.0_scaffold140G35446 Striga asiatica HOM05D002931 ORTHO05D003273 1.8e-47 194.9 598 32.8
Manes.10G063900 Manihot esculenta HOM05D002931 ORTHO05D003273 2.3e-47 194.5 659 31.9
Lj4g0006208 Lotus japonicus HOM05D002931 ORTHO05D003273 3.9e-47 193.7 650 31.7
Ah.02g120060 Amaranthus hybridus HOM05D002931 ORTHO05D003273 1.1e-46 192.2 655 30.8
Ca_18209_v3 Cicer arietinum L. HOM05D002931 ORTHO05D003273 1.1e-46 192.2 632 32.6
Potri.010G098200 Populus trichocarpa HOM05D002931 ORTHO05D003273 1.1e-46 192.2 665 30.8
CAN.G282.80 Capsicum annuum HOM05D002931 ORTHO05D003273 4.3e-46 190.3 617 31.3
Sc16g0002250 Simmondsia chinensis HOM05D002931 ORTHO05D003273 1.3e-45 188.7 623 31.8
FAN13G0683 Fragaria x ananassa HOM05D002931 ORTHO05D003273 2.8e-45 187.6 666 30.6
Lalb_Chr12g0209231 Lupinus albus HOM05D002931 ORTHO05D003273 3.7e-45 187.2 649 30.2
TPR.G34760 Trifolium pratense HOM05D002931 ORTHO05D003273 3.7e-45 187.2 654 31.7
FAN04G1136 Fragaria x ananassa HOM05D002931 ORTHO05D003273 4.8e-45 186.8 646 30.5
Sc16g0002210 Simmondsia chinensis HOM05D002931 ORTHO05D003273 1.8e-44 184.9 625 31.0
FvH4_5g18690 Fragaria vesca HOM05D002931 ORTHO05D003273 2.4e-44 184.5 667 29.7
Sabra08G0109200 Salix brachista HOM05D002931 ORTHO05D003273 3.1e-44 184.1 666 31.7
arahy.Tifrunner.gnm1.ann1.FAG6RL Arachis hypogaea HOM05D002931 ORTHO05D003273 4.1e-44 183.7 647 30.1
FAN08G0794 Fragaria x ananassa HOM05D002931 ORTHO05D003273 5.3e-44 183.3 655 30.4
TWI53G0202 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 5.3e-44 183.3 621 29.1
TWI53G1306 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 5.3e-44 183.3 674 28.3
Lalb_Chr07g0188071 Lupinus albus HOM05D002931 ORTHO05D003273 1.2e-43 182.2 664 28.8
Haze_01567 Corylus avellana HOM05D002931 ORTHO05D003273 2.6e-43 181.0 696 29.2
Gohir.D01G138200 Gossypium hirsutum HOM05D002931 ORTHO05D003273 2.6e-43 181.0 658 29.8
Sabra10G0070700 Salix brachista HOM05D002931 ORTHO05D003273 3.4e-43 180.6 681 30.4
Gohir.A01G145836 Gossypium hirsutum HOM05D002931 ORTHO05D003273 7.6e-43 179.5 664 30.0
Duzib268G1680 Durio zibethinus HOM05D002931 ORTHO05D003273 1.0e-42 179.1 670 30.0
FAN18G3391 Fragaria x ananassa HOM05D002931 ORTHO05D003273 1.3e-42 178.7 676 29.3
PSO782G2514 Papaver somniferum HOM05D002931 ORTHO05D003273 1.3e-42 178.7 677 29.5
PGR031G0955 Punica granatum HOM05D002931 ORTHO05D003273 3.8e-42 177.2 497 30.6
arahy.Tifrunner.gnm1.ann1.QW19KK Arachis hypogaea HOM05D002931 ORTHO05D003273 2.5e-41 174.5 647 29.2
Lalb_Chr13g0293111 Lupinus albus HOM05D002931 ORTHO05D003273 5.5e-41 173.3 657 30.3
PSO063G4393 Papaver somniferum HOM05D002931 ORTHO05D003273 1.4e-39 168.7 677 28.7
TAR629G2161 Trochodendron aralioides HOM05D002931 ORTHO05D003273 1.4e-39 168.7 701 29.0
HanXRQChr12g0365801 Helianthus annuus HOM05D002931 ORTHO05D003273 3.9e-39 167.2 631 28.4
Eucgr.G02557 Eucalyptus grandis HOM05D002931 ORTHO05D003273 9.7e-38 162.5 650 28.9
Ah.03g147130 Amaranthus hybridus HOM05D002931 ORTHO05D003273 1.3e-37 162.2 650 28.0
EL10Ac6g15402 Beta vulgaris HOM05D002931 ORTHO05D003273 2.8e-37 161.0 466 31.1
MBI06_g12324_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 1.8e-36 158.3 690 30.0
HanXRQChr08g0225031 Helianthus annuus HOM05D002931 ORTHO05D003273 9.1e-36 156.0 619 28.6
Nn3g18713 Nelumbo nucifera HOM05D002931 ORTHO05D003273 2.6e-35 154.5 545 29.5
CARHR144830 Cardamine hirsuta HOM05D002931 ORTHO05D003273 5.0e-34 150.2 573 30.9
AL5G11440 Arabidopsis lyrata HOM05D002931 ORTHO05D003273 8.5e-34 149.4 596 31.2
Lsat_1_v5_gn_8_34141 Lactuca sativa HOM05D002931 ORTHO05D003273 9.4e-33 146.0 503 28.8
Sp2g13570 Schrenkiella parvula HOM05D002931 ORTHO05D003273 2.1e-32 144.8 529 29.9
THA.LOC104824107 Tarenaya hassleriana HOM05D002931 ORTHO05D003273 2.1e-32 144.8 643 28.1
AUR62017780 Chenopodium quinoa HOM05D002931 ORTHO05D003273 7.9e-32 142.9 637 26.8
Aqoxy3G04227 Aquilegia oxysepala HOM05D002931 ORTHO05D003273 2.3e-31 141.4 689 27.4
ECA233G4272 Erigeron canadensis HOM05D002931 ORTHO05D003273 8.8e-31 139.4 583 28.8
AUR62003472 Chenopodium quinoa HOM05D002931 ORTHO05D003273 9.7e-30 136.0 669 26.5
Carub.0005s0123 Capsella rubella HOM05D002931 ORTHO05D003273 1.3e-29 135.6 618 29.8
Lsat_1_v5_gn_4_26121 Lactuca sativa HOM05D002931 ORTHO05D003273 3.7e-29 134.0 593 27.5
Psat7g086440 Pisum sativum HOM05D002931 ORTHO05D003273 4.8e-29 133.7 409 31.1
CDE04G2689 Ceratophyllum demersum HOM05D002931 ORTHO05D003273 2.4e-28 131.3 679 27.1
Aa31LG2G7780 Aethionema arabicum HOM05D002931 ORTHO05D003273 7.7e-27 126.3 573 27.4
Thhalv10003749m.g Eutrema salsugineum HOM05D002931 ORTHO05D003273 1.0e-26 125.9 583 29.5
THA.LOC104824102 Tarenaya hassleriana HOM05D002931 ORTHO05D003273 1.0e-26 125.9 544 28.7
Nn4g24879 Nelumbo nucifera HOM05D002931 ORTHO05D003273 1.3e-26 125.6 709 27.2
HanXRQChr16g0526491 Helianthus annuus HOM05D002931 ORTHO05D003273 1.7e-26 125.2 602 30.6
MBI03_g42615_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 9.4e-25 119.4 686 27.8
AT2G02160 Arabidopsis thaliana HOM05D002931 ORTHO05D003273 5.7e-22 110.2 494 29.1
BcaB07g30353 Brassica carinata HOM05D002931 ORTHO05D003273 2.8e-21 107.8 563 28.1
SHI04203 Sapria himalayana HOM05D002931 ORTHO05D003273 4.8e-21 107.1 489 29.7
A02p32680 Brassica napus HOM05D002931 ORTHO05D003273 6.3e-21 106.7 513 29.0
BraA02t08284Z Brassica rapa HOM05D002931 ORTHO05D003273 6.3e-21 106.7 513 29.0
HanXRQChr17g0565571 Helianthus annuus HOM05D002931 ORTHO05D003273 2.4e-20 104.8 579 26.6
HPP92_014781 Vanilla planifolia HOM05D002931 ORTHO05D003273 5.3e-20 103.6 706 25.9
C02p50290 Brassica napus HOM05D002931 ORTHO05D003273 4.5e-19 100.5 514 28.2
BcaC03g17120 Brassica carinata HOM05D002931 ORTHO05D003273 1.3e-18 99.0 514 27.4
CDE02G4446 Ceratophyllum demersum HOM05D002931 ORTHO05D003273 3.2e-17 94.4 463 29.4
ECA233G0143 Erigeron canadensis HOM05D000188 ORTHO05D000362 3.6e-16 90.9 425 27.1
Os04g0671800 Oryza sativa ssp. japonica HOM05D002931 ORTHO05D003273 6.1e-16 90.1 672 25.3
ATR0618G305 Amborella trichopoda HOM05D002931 ORTHO05D003273 6.7e-15 86.7 718 26.2
BcaB07g30703 Brassica carinata HOM05D002931 ORTHO05D003273 4.1e-12 77.4 330 28.5
Zm00001eb433430 Zea mays HOM05D002931 ORTHO05D003273 1.0e-10 72.8 641 24.2
HPP92_008712 Vanilla planifolia HOM05D009170 ORTHO05D012011 3.8e-10 70.9 455 28.4
BcaB07g30706 Brassica carinata HOM05D002931 ORTHO05D003273 1.1e-09 69.3 569 26.4
GSVIVG01010243001 Vitis vinifera HOM05D002931 ORTHO05D003273 5.5e-09 67.0 104 35.6
Actinidia30196 Actinidia chinensis HOM05D002931 ORTHO05D003273 7.2e-09 66.6 99 39.4
HPP92_020781 Vanilla planifolia HOM05D009170 ORTHO05D012011 8.0e-08 63.2 507 25.0
Atru.chr7.1207 Acer truncatum HOM05D002931 ORTHO05D003273 8.8e-07 59.7 454 26.4
Zm00001eb190610 Zea mays HOM05D002931 ORTHO05D003273 8.8e-07 59.7 535 25.2
TAR636G1764 Trochodendron aralioides HOM05D002931 ORTHO05D003273 2.0e-06 58.5 509 25.3


User provided reference genes

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