Gene: Sopen01g003710
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g003710
- Transcript Identifier Sopen01g003710.1
- Gene Type Coding gene
- Location Spenn-ch01 : 2572505-2576386 : positive
Gene Family Information
- ID HOM05D002931
- #Genes/#Species 235/93
- Phylogenetic origin
- ID ORTHO05D003273
- #Genes/#Species 233/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g003710.1
Descriptions
- Description CCCH-type zinc finger family protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G02160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G02160 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G02160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G02160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.10.1.6 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.regulatory mRNA export factor (ZC11A) |