Gene: AT2G02160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G02160
  • Transcript Identifier AT2G02160.1
  • Gene Type Coding gene
  • Location Chr2 : 553407-555899 : negative

Gene Family Information

  • ID HOM05D002931
  • #Genes/#Species 235/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G02160.1
  • uniprot Q9ZUM0

Descriptions

  • Description CCCH-type zinc finger family protein
  • Computational description CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0016973
IBA
Gene Ontologypoly(A)+ mRNA export from nucleus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA, HDA
IBA
Gene OntologymRNA binding2 3 4
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036855 Zinc finger, CCCH-type superfamily
IPR000571 Zinc finger, CCCH-type
IPR041686 Zinc-finger CCCH domain
Mapman id Description
16.10.1.6 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.regulatory mRNA export factor (ZC11A)