Gene: COL.COLO4_27513

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_27513
  • Transcript Identifier COL.rna26239
  • Gene Type Coding gene
  • Location AWUE01019627.1 : 14672-17875 : positive

Gene Family Information

  • ID HOM05D002931
  • #Genes/#Species 235/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna26239
  • GenBank OMO72667.1
  • id gene27485
  • gene_name COLO4_27513
  • uniprot A0A1R3HQH3

Descriptions

  • Description Zinc finger, CCCH-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G02160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G02160
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G02160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G02160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000571 Zinc finger, CCCH-type
IPR036855 Zinc finger, CCCH-type superfamily
IPR041686 Zinc-finger CCCH domain
Mapman id Description
16.10.1.6 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.regulatory mRNA export factor (ZC11A)