Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 6.4e-246 853.6 419 100.0
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 2.8e-172 609.0 425 71.5
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 4.9e-169 598.2 432 71.1
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 3.5e-167 592.0 434 69.1
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 3.9e-166 588.6 420 70.2
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 3.3e-165 585.5 415 70.4
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 5.6e-165 584.7 396 72.7
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 1.2e-162 577.0 408 69.6
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 2.0e-162 576.2 364 76.6
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 2.6e-162 575.9 407 69.3
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 5.8e-162 574.7 336 80.4
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 7.5e-162 574.3 367 76.0
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 3.7e-161 572.0 364 75.8
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 6.4e-161 571.2 383 73.1
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 1.1e-160 570.5 412 68.2
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 2.4e-160 569.3 422 68.0
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 9.2e-160 567.4 343 78.4
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 9.2e-160 567.4 342 78.7
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 1.2e-159 567.0 407 69.3
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 1.6e-159 566.6 402 69.9
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 2.7e-159 565.8 370 73.0
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 3.5e-159 565.5 412 68.0
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 6.0e-159 564.7 403 70.0
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 1.0e-158 563.9 405 69.6
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 1.0e-158 563.9 393 71.0
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 1.7e-158 563.1 343 77.0
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 2.3e-158 562.8 403 70.7
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 2.3e-158 562.8 366 74.9
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 2.3e-158 562.8 366 74.9
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 3.0e-158 562.4 418 67.2
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 3.0e-158 562.4 342 76.6
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 3.9e-158 562.0 340 77.6
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 3.9e-158 562.0 403 68.2
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 6.6e-158 561.2 414 67.6
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 8.6e-158 560.8 357 74.5
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 1.1e-157 560.5 425 66.8
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 1.1e-157 560.5 339 78.2
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 1.5e-157 560.1 368 72.6
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 1.5e-157 560.1 521 59.1
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 1.9e-157 559.7 364 73.6
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 3.3e-157 558.9 423 65.2
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 4.3e-157 558.5 437 64.5
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 4.3e-157 558.5 343 76.1
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 7.3e-157 557.8 384 71.4
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 1.6e-156 556.6 399 67.2
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 2.8e-156 555.8 424 65.3
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 3.6e-156 555.4 360 73.6
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 3.6e-156 555.4 340 75.6
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 4.7e-156 555.1 362 74.0
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 8.1e-156 554.3 429 63.6
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 1.1e-155 553.9 411 67.9
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 1.1e-155 553.9 411 67.9
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 1.4e-155 553.5 426 66.0
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 1.8e-155 553.1 439 63.8
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 1.8e-155 553.1 408 67.6
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 1.8e-155 553.1 425 64.9
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 3.1e-155 552.4 416 65.9
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 5.2e-155 551.6 402 69.7
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 5.2e-155 551.6 402 69.7
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 1.5e-154 550.1 342 76.0
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 2.0e-154 549.7 340 75.3
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 2.6e-154 549.3 399 67.9
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 3.4e-154 548.9 422 65.4
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 3.4e-154 548.9 427 64.2
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 4.4e-154 548.5 429 63.2
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 2.2e-153 546.2 416 66.6
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 2.2e-153 546.2 431 65.0
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 8.3e-153 544.3 429 62.7
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 1.9e-152 543.1 391 68.8
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 2.4e-152 542.7 336 75.6
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 3.2e-152 542.3 425 64.5
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 5.4e-152 541.6 406 64.5
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 7.1e-152 541.2 422 65.9
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 9.2e-152 540.8 363 71.1
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 2.3e-150 536.2 398 66.3
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 3.9e-150 535.4 424 63.7
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 7.3e-149 531.2 424 62.7
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 1.6e-148 530.0 349 74.8
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 1.1e-147 527.3 410 64.6
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 1.1e-147 527.3 415 62.4
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.8e-147 526.6 336 73.2
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 3.4e-146 522.3 344 73.3
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 2.2e-145 519.6 366 70.8
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 4.1e-144 515.4 436 62.6
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 1.3e-142 510.4 377 63.4
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 3.6e-140 502.3 410 62.7
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 6.0e-135 485.0 345 69.3
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 6.6e-134 481.5 373 64.6
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 1.1e-133 480.7 380 63.7
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 8.1e-132 474.6 363 64.7
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 1.5e-130 470.3 450 56.4
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 1.7e-129 466.8 370 64.1
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 3.9e-126 455.7 363 63.9
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 3.3e-125 452.6 275 78.9
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 1.4e-123 447.2 346 60.4
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 1.2e-122 444.1 349 65.0
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 4.5e-122 442.2 276 74.6
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 5.5e-120 435.3 361 59.6
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 2.1e-119 433.3 338 60.1
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 2.7e-119 433.0 349 62.2
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 5.1e-118 428.7 399 55.6
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 2.5e-117 426.4 342 59.4
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 1.1e-112 411.0 295 63.4
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.5e-111 406.0 387 55.6
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.7e-108 396.0 414 52.2
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 2.1e-103 380.2 229 75.5
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.6e-95 354.0 207 77.3
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 2.8e-92 343.2 392 48.2
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 8.5e-89 331.6 323 55.7
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 1.3e-84 317.8 185 82.7
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 2.4e-83 313.5 185 77.3
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 3.1e-83 313.2 330 45.5
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 1.6e-82 310.8 329 47.1
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.1e-80 304.7 270 58.1
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 6.7e-78 295.4 174 81.0
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 5.5e-72 275.8 276 48.6
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 2.3e-70 270.4 222 62.6
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 5.2e-70 269.2 208 62.0
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 4.4e-69 266.2 246 58.9
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 5.7e-69 265.8 310 43.2
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 1.2e-63 248.1 311 42.4
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.6e-63 247.7 201 61.7
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 6.1e-63 245.7 211 59.7
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 4.1e-59 233.0 140 77.9
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 3.0e-49 200.3 121 76.9
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 4.9e-44 183.0 363 33.1
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 6.2e-39 166.0 373 29.5
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 1.4e-38 164.9 371 27.2
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 4.0e-38 163.3 159 52.8
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 7.1e-35 152.5 121 62.0
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 1.6e-34 151.4 104 69.2
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 2.8e-31 140.6 139 54.7
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 2.6e-29 134.0 82 74.4
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 6.6e-25 119.4 131 45.8
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.1e-23 114.4 91 59.3
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 6.9e-22 109.4 98 58.2
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 3.4e-21 107.1 99 55.6
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 2.1e-18 97.8 209 31.6
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 3.5e-18 97.1 62 71.0
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 6.2e-15 86.3 55 70.9
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 7.6e-13 79.3 59 57.6
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 3.7e-07 60.5 39 69.2
FvH4_6g44671 Fragaria vesca HOM05D005206 ORTHO05D006219 6.9e-06 56.2 35 77.1


User provided reference genes

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