Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 1.0e-145 520.0 257 100.0
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 1.5e-32 144.1 118 58.5
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 8.5e-31 138.3 118 56.8
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 1.4e-30 137.5 118 54.2
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.9e-30 137.1 118 58.5
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 1.9e-30 137.1 122 55.7
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 2.5e-30 136.7 118 55.9
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 4.2e-30 136.0 123 56.1
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 7.2e-30 135.2 118 57.6
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 7.2e-30 135.2 118 55.9
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 9.3e-30 134.8 118 55.9
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.2e-29 134.4 131 55.0
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 2.1e-29 133.7 120 59.2
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 3.6e-29 132.9 118 56.8
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 6.1e-29 132.1 118 55.1
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.0e-28 131.3 129 52.7
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 1.8e-28 130.6 118 55.1
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 3.0e-28 129.8 121 54.5
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 3.0e-28 129.8 115 56.5
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 3.9e-28 129.4 118 56.8
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 5.1e-28 129.0 115 55.7
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 6.7e-28 128.6 118 57.6
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 1.1e-27 127.9 116 55.2
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 1.5e-27 127.5 117 55.6
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 1.5e-27 127.5 119 52.1
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 3.3e-27 126.3 117 54.7
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 3.3e-27 126.3 116 52.6
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 4.3e-27 125.9 119 55.5
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 7.4e-27 125.2 118 51.7
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 9.7e-27 124.8 136 50.0
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 9.7e-27 124.8 112 50.9
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 1.3e-26 124.4 131 52.7
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 1.3e-26 124.4 128 52.3
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 1.3e-26 124.4 118 52.5
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 1.3e-26 124.4 107 57.0
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 1.6e-26 124.0 119 51.3
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 2.8e-26 123.2 120 54.2
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 3.7e-26 122.9 120 50.0
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 4.8e-26 122.5 118 54.2
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 6.3e-26 122.1 119 52.9
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 8.2e-26 121.7 120 47.5
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 1.1e-25 121.3 117 51.3
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 1.4e-25 120.9 121 50.4
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 1.8e-25 120.6 121 50.4
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.8e-25 120.6 117 50.4
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 1.8e-25 120.6 117 50.4
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 1.8e-25 120.6 137 44.5
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 2.4e-25 120.2 117 50.4
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 4.1e-25 119.4 118 50.8
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 6.9e-25 118.6 118 53.4
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 6.9e-25 118.6 124 52.4
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 6.9e-25 118.6 118 52.5
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 9.1e-25 118.2 118 53.4
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 9.1e-25 118.2 118 50.0
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 1.2e-24 117.9 117 54.7
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 1.5e-24 117.5 117 50.4
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 1.5e-24 117.5 117 50.4
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 2.0e-24 117.1 107 55.1
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 2.6e-24 116.7 121 52.1
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 2.6e-24 116.7 121 52.1
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 2.6e-24 116.7 124 50.0
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 3.4e-24 116.3 124 52.4
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 3.4e-24 116.3 120 48.3
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 4.5e-24 115.9 118 51.7
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 4.5e-24 115.9 118 44.9
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 5.9e-24 115.5 117 48.7
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 5.9e-24 115.5 119 50.4
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 5.9e-24 115.5 116 51.7
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 7.7e-24 115.2 117 48.7
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 7.7e-24 115.2 117 47.9
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 1.0e-23 114.8 118 50.8
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.0e-23 114.8 117 53.0
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 1.3e-23 114.4 125 52.0
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 1.3e-23 114.4 118 49.2
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 1.3e-23 114.4 116 49.1
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 1.3e-23 114.4 125 45.6
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 1.7e-23 114.0 126 50.8
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 1.7e-23 114.0 119 47.1
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 1.7e-23 114.0 117 49.6
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 2.2e-23 113.6 121 52.9
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 2.2e-23 113.6 121 52.9
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 2.9e-23 113.2 118 48.3
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 2.9e-23 113.2 121 46.3
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 3.8e-23 112.8 121 49.6
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 3.8e-23 112.8 117 49.6
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 5.0e-23 112.5 120 50.8
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 5.0e-23 112.5 120 50.8
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 8.5e-23 111.7 114 51.8
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 8.5e-23 111.7 117 51.3
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 1.1e-22 111.3 118 53.4
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 1.1e-22 111.3 120 50.8
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 1.9e-22 110.5 118 48.3
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 3.2e-22 109.8 100 59.0
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 7.2e-22 108.6 120 48.3
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 7.2e-22 108.6 120 48.3
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 7.2e-22 108.6 122 47.5
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 7.2e-22 108.6 119 44.5
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 7.2e-22 108.6 89 59.6
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 9.4e-22 108.2 120 47.5
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 2.7e-21 106.7 120 45.8
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 4.6e-21 105.9 117 46.2
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 6.1e-21 105.5 116 46.6
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 7.9e-21 105.1 117 46.2
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 1.0e-20 104.8 127 45.7
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 1.0e-20 104.8 127 45.7
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 1.0e-20 104.8 127 45.7
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 1.4e-20 104.4 115 42.6
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 1.8e-20 104.0 124 46.8
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 2.3e-20 103.6 127 47.2
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 3.0e-20 103.2 117 44.4
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 3.0e-20 103.2 127 44.9
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 6.7e-20 102.1 123 47.2
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 8.8e-20 101.7 137 47.4
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 1.1e-19 101.3 89 57.3
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 1.5e-19 100.9 91 53.8
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.0e-19 100.5 116 44.0
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 4.4e-19 99.4 134 45.5
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 4.4e-19 99.4 134 45.5
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 4.4e-19 99.4 134 45.5
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 4.4e-19 99.4 119 43.7
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 4.4e-19 99.4 89 50.6
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 9.7e-19 98.2 117 43.6
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 2.2e-18 97.1 87 54.0
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 2.8e-18 96.7 137 42.3
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.1e-17 94.7 129 44.2
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 1.8e-17 94.0 118 43.2
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 4.1e-17 92.8 103 43.7
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 5.3e-17 92.4 131 42.7
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 9.1e-17 91.7 120 41.7
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 1.3e-15 87.8 122 42.6
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 2.9e-15 86.7 86 53.5
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 2.9e-15 86.7 91 42.9
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 5.0e-15 85.9 119 44.5
SEGI_13490 Sequoiadendron giganteum HOM05D004569 ORTHO05D000001 8.5e-15 85.1 80 52.5
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 1.1e-14 84.7 137 37.2
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 4.2e-14 82.8 80 51.2
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 9.4e-14 81.6 75 52.0
CBR_g19683 Chara braunii HOM05D004569 ORTHO05D005333 3.6e-13 79.7 90 53.3
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 4.7e-13 79.3 90 43.3
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 4.7e-13 79.3 129 39.5
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 4.7e-13 79.3 80 51.2
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 7.9e-13 78.6 111 43.2
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 3.0e-12 76.6 92 46.7
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 2.6e-11 73.6 87 47.1
arahy.Tifrunner.gnm1.ann1.LSLG48 Arachis hypogaea HOM05D001291 ORTHO05D005333 7.4e-11 72.0 73 49.3
FAN18G3311 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.4e-09 67.0 117 35.0
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 3.1e-09 66.6 59 50.8
SEGI_07191 Sequoiadendron giganteum HOM05D004569 ORTHO05D005333 4.1e-09 66.2 71 47.9
Lj6C645G5 Lonicera japonica HOM05D004569 ORTHO05D005333 7.0e-09 65.5 118 34.7
vmacro08367 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 1.3e-07 61.2 115 33.0
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 2.2e-07 60.5 73 42.5
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 2.5e-06 57.0 62 45.2
AUR62008054 Chenopodium quinoa HOM05D000001 ORTHO05D000501 4.2e-06 56.2 70 45.7


User provided reference genes

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