Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7138 Utricularia gibba HOM05D006350 ORTHO05D007850 3.0e-65 251.5 114 100.0
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 4.3e-35 151.4 114 60.5
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 2.3e-33 145.6 111 60.4
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 6.8e-33 144.1 117 59.8
Nitab4.5_0000091g0460 Nicotiana tabacum HOM05D006350 ORTHO05D007850 8.9e-33 143.7 112 58.0
Cc02_g11700 Coffea canephora HOM05D006350 ORTHO05D007850 3.4e-32 141.7 115 58.3
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 3.4e-32 141.7 112 58.9
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 4.4e-32 141.4 111 59.5
vmacro15831 Vaccinium macrocarpon HOM05D006350 ORTHO05D007850 1.3e-31 139.8 114 55.3
Rhsim02G0112000 Rhododendron simsii HOM05D006350 ORTHO05D007850 2.2e-31 139.0 114 55.3
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 2.4e-30 135.6 116 58.6
ClCG01G022180 Citrullus lanatus HOM05D006350 ORTHO05D007850 3.2e-30 135.2 110 51.8
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 2.1e-29 132.5 113 52.2
CSS0026996 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 7.8e-29 130.6 113 54.0
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 7.8e-29 130.6 115 53.0
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 7.8e-29 130.6 111 54.1
Cpa.g.sc198.9 Carica papaya HOM05D006350 ORTHO05D007850 1.0e-28 130.2 113 53.1
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 1.0e-28 130.2 103 57.3
Oeu051224.2 Olea europaea HOM05D006350 ORTHO05D007850 1.3e-28 129.8 113 52.2
DCAR_008125 Daucus carota HOM05D006350 ORTHO05D007850 1.7e-28 129.4 112 54.5
Nn1g03636 Nelumbo nucifera HOM05D006350 ORTHO05D007850 1.7e-28 129.4 107 57.0
RcHm_v2.0_Chr5g0003961 Rosa chinensis HOM05D006350 ORTHO05D007850 3.0e-28 128.6 113 54.9
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 5.1e-28 127.9 114 52.6
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 5.1e-28 127.9 112 54.5
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 5.1e-28 127.9 103 57.3
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 6.6e-28 127.5 105 58.1
PSO541G3631 Papaver somniferum HOM05D006350 ORTHO05D007850 6.6e-28 127.5 104 53.8
CSS0007285 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 8.6e-28 127.1 113 53.1
MD10G1314700 Malus domestica HOM05D006350 ORTHO05D007850 8.6e-28 127.1 113 51.3
Sed0019871 Sechium edule HOM05D006350 ORTHO05D007850 8.6e-28 127.1 110 51.8
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 1.1e-27 126.7 116 51.7
CANSAT80G1390 Cannabis sativa HOM05D006350 ORTHO05D007850 1.5e-27 126.3 115 53.0
FAN25G1413 Fragaria x ananassa HOM05D006350 ORTHO05D007850 1.5e-27 126.3 112 53.6
TAR629G2651 Trochodendron aralioides HOM05D006350 ORTHO05D007850 1.5e-27 126.3 112 52.7
BcaB01g05074 Brassica carinata HOM05D006350 ORTHO05D007850 1.9e-27 125.9 105 57.1
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 4.3e-27 124.8 112 53.6
BolC3t13297H Brassica oleracea HOM05D006350 ORTHO05D007850 5.6e-27 124.4 105 57.1
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 7.3e-27 124.0 104 52.9
PSO675G5568 Papaver somniferum HOM05D006350 ORTHO05D007850 1.2e-26 123.2 104 51.0
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 1.2e-26 123.2 114 48.2
Prupe.4G026100 Prunus persica HOM05D006350 ORTHO05D007850 2.1e-26 122.5 115 53.0
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 2.8e-26 122.1 105 55.2
MBI02_g10104_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 2.8e-26 122.1 115 52.2
PGR004G2689 Punica granatum HOM05D006350 ORTHO05D007850 2.8e-26 122.1 114 52.6
Sabra04G0012300 Salix brachista HOM05D006350 ORTHO05D007850 2.8e-26 122.1 115 53.0
Aqoxy4G01993 Aquilegia oxysepala HOM05D006350 ORTHO05D007850 3.6e-26 121.7 110 52.7
AL6G25990 Arabidopsis lyrata HOM05D006350 ORTHO05D007850 4.7e-26 121.3 105 53.3
Os07g0530100 Oryza sativa ssp. japonica HOM05D006350 ORTHO05D007850 4.7e-26 121.3 103 53.4
Potri.004G022500 Populus trichocarpa HOM05D006350 ORTHO05D007850 4.7e-26 121.3 115 51.3
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 4.7e-26 121.3 113 52.2
AT5G15170 Arabidopsis thaliana HOM05D006350 ORTHO05D007850 8.1e-26 120.6 105 56.2
CsaV3_6G049260 Cucumis sativus L. HOM05D006350 ORTHO05D007850 8.1e-26 120.6 109 50.5
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 8.1e-26 120.6 114 53.5
AUR62022012 Chenopodium quinoa HOM05D006350 ORTHO05D007850 1.1e-25 120.2 111 53.2
QL05p075148 Quercus lobata HOM05D006350 ORTHO05D007850 1.1e-25 120.2 114 47.4
THA.LOC104821036 Tarenaya hassleriana HOM05D006350 ORTHO05D007850 3.1e-25 118.6 119 52.1
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 4.0e-25 118.2 109 53.2
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 4.0e-25 118.2 103 52.4
CARHR198140 Cardamine hirsuta HOM05D006350 ORTHO05D007850 5.2e-25 117.9 106 53.8
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 6.9e-25 117.5 113 53.1
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 6.9e-25 117.5 105 52.4
Thhalv10012972m.g Eutrema salsugineum HOM05D006350 ORTHO05D007850 1.2e-24 116.7 105 51.4
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 1.5e-24 116.3 109 52.3
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 4.4e-24 114.8 109 51.4
Lalb_Chr09g0319631 Lupinus albus HOM05D006350 ORTHO05D007850 4.4e-24 114.8 106 52.8
Sc05g0008900 Simmondsia chinensis HOM05D006350 ORTHO05D007850 4.4e-24 114.8 104 48.1
Duzib160G0024 Durio zibethinus HOM05D006350 ORTHO05D007850 5.8e-24 114.4 112 51.8
Carub.0006s1334 Capsella rubella HOM05D006350 ORTHO05D007850 1.7e-23 112.8 106 51.9
Thecc.06G214100 Theobroma cacao HOM05D006350 ORTHO05D007850 2.9e-23 112.1 113 51.3
Aa31LG11G14390 Aethionema arabicum HOM05D006350 ORTHO05D007850 1.1e-22 110.2 109 49.5
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 2.4e-22 109.0 108 54.6
Phvul.002G048900 Phaseolus vulgaris HOM05D006350 ORTHO05D007850 1.2e-21 106.7 108 51.9
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 1.2e-21 106.7 111 46.8
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 2.7e-21 105.5 107 48.6
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 2.7e-21 105.5 117 46.2
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 4.6e-21 104.8 105 53.3
arahy.Tifrunner.gnm1.ann1.QV9JTX Arachis hypogaea HOM05D006350 ORTHO05D007850 6.0e-21 104.4 105 53.3
ECA248G2377 Erigeron canadensis HOM05D006350 ORTHO05D007850 5.1e-20 101.3 103 46.6
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 8.7e-20 100.5 104 45.2
VMungo1215G2459 Vigna mungo HOM05D006350 ORTHO05D007850 8.7e-20 100.5 106 50.9
Glyma.04G064300 Glycine max HOM05D006350 ORTHO05D007850 1.1e-19 100.1 106 48.1
Mapoly0129s0047 Marchantia polymorpha HOM05D006350 ORTHO05D007850 6.9e-17 90.9 125 41.6
SMO117G0269 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 1.3e-15 86.7 104 42.3
HPP92_017614 Vanilla planifolia HOM05D006350 ORTHO05D007850 4.2e-14 81.6 84 46.4
Dinv17831 Davidia involucrata HOM05D006350 ORTHO05D007850 1.0e-12 77.0 80 48.8
Dinv20017 Davidia involucrata HOM05D006350 ORTHO05D007850 2.3e-12 75.9 80 50.0
EL10Ac8g19892 Beta vulgaris HOM05D006350 ORTHO05D007850 8.7e-12 73.9 83 51.8
Nn1g07028 Nelumbo nucifera HOM05D006350 ORTHO05D007850 1.5e-11 73.2 70 44.3
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 8.1e-10 67.4 79 43.0
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 7.6e-08 60.8 59 50.8
PRCOL_00001871 Prasinoderma coloniale HOM05D006350 ORTHO05D007850 7.1e-06 54.3 91 33.0


User provided reference genes

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