Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 4.2e-122 441.4 232 100.0
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 1.3e-30 137.5 66 97.0
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 1.7e-30 137.1 93 75.3
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 1.7e-30 137.1 93 75.3
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 4.9e-30 135.6 93 74.2
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 6.5e-30 135.2 86 77.9
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 3.2e-29 132.9 92 73.9
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 4.2e-29 132.5 76 86.8
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 5.5e-29 132.1 76 85.5
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 5.5e-29 132.1 74 85.1
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 7.1e-29 131.7 86 76.7
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 9.3e-29 131.3 70 88.6
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 1.2e-28 131.0 71 84.5
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.6e-28 130.6 87 77.0
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 2.1e-28 130.2 102 67.6
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 2.7e-28 129.8 74 86.5
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 6.0e-28 128.6 81 79.0
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 1.0e-27 127.9 80 80.0
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 1.8e-27 127.1 60 98.3
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 2.3e-27 126.7 92 73.9
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 2.3e-27 126.7 60 98.3
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 2.3e-27 126.7 60 98.3
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 2.3e-27 126.7 81 80.2
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 2.3e-27 126.7 60 96.7
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 2.3e-27 126.7 61 93.4
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 2.3e-27 126.7 63 93.7
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 2.3e-27 126.7 60 96.7
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 2.3e-27 126.7 80 82.5
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 3.0e-27 126.3 64 92.2
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 3.0e-27 126.3 60 96.7
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 3.0e-27 126.3 60 96.7
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 3.9e-27 125.9 64 92.2
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 3.9e-27 125.9 59 98.3
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.1e-27 125.6 90 72.2
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 5.1e-27 125.6 66 90.9
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 5.1e-27 125.6 66 90.9
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 5.1e-27 125.6 64 92.2
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 5.1e-27 125.6 60 95.0
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 6.7e-27 125.2 69 88.4
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 6.7e-27 125.2 61 93.4
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 6.7e-27 125.2 91 71.4
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 6.7e-27 125.2 60 96.7
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 6.7e-27 125.2 60 96.7
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 6.7e-27 125.2 60 96.7
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 6.7e-27 125.2 60 96.7
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 6.7e-27 125.2 60 96.7
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 6.7e-27 125.2 60 96.7
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 6.7e-27 125.2 60 95.0
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 1.1e-26 124.4 60 95.0
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 1.1e-26 124.4 65 90.8
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 1.1e-26 124.4 60 95.0
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 1.1e-26 124.4 77 81.8
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 1.1e-26 124.4 60 95.0
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 1.1e-26 124.4 66 90.9
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 1.1e-26 124.4 64 90.6
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 1.1e-26 124.4 66 90.9
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 1.5e-26 124.0 96 67.7
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 1.5e-26 124.0 89 71.9
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.9e-26 123.6 60 95.0
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 1.9e-26 123.6 60 93.3
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 1.9e-26 123.6 85 74.1
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 2.5e-26 123.2 60 93.3
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 2.5e-26 123.2 60 95.0
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 2.5e-26 123.2 64 89.1
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 3.3e-26 122.9 60 93.3
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 3.3e-26 122.9 60 95.0
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 3.3e-26 122.9 60 95.0
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 3.3e-26 122.9 60 93.3
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 4.3e-26 122.5 60 93.3
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 4.3e-26 122.5 60 93.3
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 4.3e-26 122.5 60 95.0
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 4.3e-26 122.5 60 95.0
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 4.3e-26 122.5 77 79.2
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 5.7e-26 122.1 65 87.7
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 5.7e-26 122.1 60 95.0
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 5.7e-26 122.1 60 95.0
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 5.7e-26 122.1 95 66.3
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 7.4e-26 121.7 79 77.2
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 7.4e-26 121.7 60 91.7
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 7.4e-26 121.7 79 77.2
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 7.4e-26 121.7 79 77.2
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 9.7e-26 121.3 101 67.3
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 9.7e-26 121.3 60 91.7
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 1.3e-25 120.9 60 93.3
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 1.3e-25 120.9 60 93.3
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 1.3e-25 120.9 60 91.7
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 1.3e-25 120.9 60 90.0
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 1.6e-25 120.6 60 91.7
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.6e-25 120.6 60 93.3
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.6e-25 120.6 60 93.3
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 1.6e-25 120.6 60 86.7
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 2.2e-25 120.2 64 87.5
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 2.2e-25 120.2 60 88.3
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 2.2e-25 120.2 63 87.3
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 2.2e-25 120.2 59 93.2
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 2.2e-25 120.2 66 87.9
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 2.2e-25 120.2 59 93.2
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 2.2e-25 120.2 65 89.2
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 2.8e-25 119.8 91 70.3
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 2.8e-25 119.8 60 91.7
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 3.7e-25 119.4 66 86.4
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 3.7e-25 119.4 97 66.0
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 3.7e-25 119.4 90 70.0
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 4.8e-25 119.0 78 76.9
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 4.8e-25 119.0 78 76.9
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 4.8e-25 119.0 60 88.3
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 4.8e-25 119.0 60 93.3
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 4.8e-25 119.0 60 93.3
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 4.8e-25 119.0 60 86.7
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 6.3e-25 118.6 210 44.8
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 1.4e-24 117.5 64 84.4
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 1.4e-24 117.5 78 74.4
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 1.4e-24 117.5 64 84.4
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 1.8e-24 117.1 103 63.1
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 1.8e-24 117.1 64 84.4
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 1.8e-24 117.1 103 63.1
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 1.8e-24 117.1 56 94.6
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 1.8e-24 117.1 93 64.5
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 2.4e-24 116.7 64 84.4
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 3.1e-24 116.3 56 94.6
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 3.1e-24 116.3 107 58.9
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 5.3e-24 115.5 60 88.3
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 6.9e-24 115.2 86 72.1
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 6.9e-24 115.2 59 84.7
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 6.9e-24 115.2 75 78.7
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 9.0e-24 114.8 210 44.3
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 9.0e-24 114.8 96 66.7
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 1.2e-23 114.4 64 82.8
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 1.2e-23 114.4 70 78.6
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 1.5e-23 114.0 59 84.7
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 2.0e-23 113.6 64 82.8
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 2.0e-23 113.6 64 82.8
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 2.0e-23 113.6 64 82.8
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 2.0e-23 113.6 64 82.8
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 2.0e-23 113.6 73 79.5
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 2.6e-23 113.2 193 45.1
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 3.4e-23 112.8 60 86.7
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 5.9e-23 112.1 60 81.7
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 7.6e-23 111.7 88 70.5
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 1.7e-22 110.5 64 79.7
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 2.2e-22 110.2 68 79.4
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 2.2e-22 110.2 79 70.9
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 2.9e-22 109.8 58 79.3
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 3.8e-22 109.4 60 80.0
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 1.4e-21 107.5 92 57.6
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 1.4e-21 107.5 87 69.0
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 1.9e-21 107.1 127 49.6
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 3.2e-21 106.3 50 98.0
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 5.5e-21 105.5 54 90.7
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 6.1e-20 102.1 50 90.0
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 1.0e-19 101.3 59 76.3
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 2.3e-19 100.1 49 89.8
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 3.0e-19 99.8 76 67.1
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 6.7e-19 98.6 49 91.8
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 6.7e-19 98.6 76 65.8
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 1.9e-18 97.1 52 82.7
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 4.3e-18 95.9 63 65.1
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 1.7e-17 94.0 45 93.3
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 6.3e-17 92.0 60 71.7
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 5.0e-14 82.4 62 72.6
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 1.1e-13 81.3 62 72.6
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 1.1e-13 81.3 62 72.6
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 9.4e-13 78.2 62 71.0
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 9.4e-13 78.2 62 71.0
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 9.4e-13 78.2 62 71.0
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 1.8e-11 73.9 60 65.0
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 1.1e-10 71.2 79 48.1


User provided reference genes

Program Settings