Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19261 Utricularia gibba HOM05D004857 ORTHO05D005663 9.7e-192 673.3 341 100.0
MSTRG.19426 Avicennia marina HOM05D004857 ORTHO05D005663 2.9e-87 326.2 329 59.3
Cc06_g12730 Coffea canephora HOM05D004857 ORTHO05D005663 9.3e-86 321.2 333 57.4
SalBow6G1194 Salvia bowleyana HOM05D004857 ORTHO05D005663 4.6e-85 318.9 330 58.5
GSVIVG01015011001 Vitis vinifera HOM05D004857 ORTHO05D005663 4.3e-83 312.4 340 56.5
Migut.J00878 Erythranthe guttata HOM05D004857 ORTHO05D005663 7.4e-83 311.6 305 60.7
CSS0030162 Camellia sinensis var. sinensis HOM05D004857 ORTHO05D005663 1.4e-81 307.4 333 56.5
Ca_02281_v3 Cicer arietinum L. HOM05D004857 ORTHO05D005663 1.4e-81 307.4 331 56.8
Gohir.A05G036200 Gossypium hirsutum HOM05D004857 ORTHO05D005663 1.4e-81 307.4 333 54.1
Duzib187G1561 Durio zibethinus HOM05D004857 ORTHO05D005663 4.1e-81 305.8 334 55.7
Nitab4.5_0001114g0050 Nicotiana tabacum HOM05D004857 ORTHO05D005663 4.1e-81 305.8 331 56.2
Dinv44702 Davidia involucrata HOM05D004857 ORTHO05D005663 5.3e-81 305.4 339 54.6
Eucgr.C00765 Eucalyptus grandis HOM05D004857 ORTHO05D005663 5.3e-81 305.4 340 54.4
Lj4A920T60 Lonicera japonica HOM05D004857 ORTHO05D005663 9.0e-81 304.7 334 55.1
Rhsim05G0001900 Rhododendron simsii HOM05D004857 ORTHO05D005663 9.0e-81 304.7 341 55.4
RcHm_v2.0_Chr2g0095991 Rosa chinensis HOM05D004857 ORTHO05D005663 1.2e-80 304.3 340 53.5
Sabra18G0057000 Salix brachista HOM05D004857 ORTHO05D005663 1.2e-80 304.3 340 55.6
AL4G19270 Arabidopsis lyrata HOM05D004857 ORTHO05D005663 1.5e-80 303.9 335 54.9
TAR383G0334 Trochodendron aralioides HOM05D004857 ORTHO05D005663 4.5e-80 302.4 336 53.9
Nitab4.5_0002665g0010 Nicotiana tabacum HOM05D004857 ORTHO05D005663 7.7e-80 301.6 331 55.6
vmacro03340 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.0e-79 301.2 344 56.1
CDE05G0310 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 1.3e-79 300.8 336 55.1
Gohir.D05G037700 Gossypium hirsutum HOM05D004857 ORTHO05D005663 1.3e-79 300.8 333 53.8
Gorai.009G038200 Gossypium raimondii HOM05D004857 ORTHO05D005663 1.3e-79 300.8 333 53.8
Glyma.15G183100 Glycine max HOM05D004857 ORTHO05D005663 1.7e-79 300.4 331 54.4
CAN.G457.2 Capsicum annuum HOM05D004857 ORTHO05D005663 5.0e-79 298.9 331 55.3
CiPaw.03G200100 Carya illinoinensis HOM05D004857 ORTHO05D005663 5.0e-79 298.9 340 54.4
vmacro17076 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 5.0e-79 298.9 342 55.0
arahy.Tifrunner.gnm1.ann1.I7JLU4 Arachis hypogaea HOM05D004857 ORTHO05D005663 8.5e-79 298.1 314 57.3
Manes.16G090200 Manihot esculenta HOM05D004857 ORTHO05D005663 8.5e-79 298.1 332 54.8
PGR142G2122 Punica granatum HOM05D004857 ORTHO05D005663 1.1e-78 297.7 338 53.3
VMungo1309G0172 Vigna mungo HOM05D004857 ORTHO05D005663 1.1e-78 297.7 332 54.2
MELO3C009580.2 Cucumis melo HOM05D004857 ORTHO05D005663 1.4e-78 297.4 332 55.4
Sp4g07340 Schrenkiella parvula HOM05D004857 ORTHO05D005663 1.4e-78 297.4 335 54.0
Sed0019967 Sechium edule HOM05D004857 ORTHO05D005663 1.9e-78 297.0 332 54.8
MBI19_g37995_MAGBIO Magnolia biondii HOM05D004857 ORTHO05D005663 2.5e-78 296.6 334 54.5
Nn7g37725 Nelumbo nucifera HOM05D004857 ORTHO05D005663 3.2e-78 296.2 335 54.6
Potri.018G064100 Populus trichocarpa HOM05D004857 ORTHO05D005663 3.2e-78 296.2 341 55.1
QL11p002992 Quercus lobata HOM05D004857 ORTHO05D005663 4.2e-78 295.8 334 54.2
Thecc.09G070000 Theobroma cacao HOM05D004857 ORTHO05D005663 4.2e-78 295.8 333 54.4
Phvul.009G223400 Phaseolus vulgaris HOM05D004857 ORTHO05D005663 9.4e-78 294.7 332 54.5
Actinidia39614 Actinidia chinensis HOM05D004857 ORTHO05D005663 1.2e-77 294.3 351 53.6
Cfa002936 Carpinus fangiana HOM05D004857 ORTHO05D005663 1.2e-77 294.3 339 54.0
Aqoxy6G02713 Aquilegia oxysepala HOM05D004857 ORTHO05D005663 1.6e-77 293.9 329 52.6
Glyma.09G074100 Glycine max HOM05D004857 ORTHO05D005663 2.1e-77 293.5 332 54.2
Actinidia30259 Actinidia chinensis HOM05D004857 ORTHO05D005663 2.7e-77 293.1 339 54.0
Solyc07g017490.3 Solanum lycopersicum HOM05D004857 ORTHO05D005663 2.7e-77 293.1 333 54.7
Sopen07g006280 Solanum pennellii HOM05D004857 ORTHO05D005663 2.7e-77 293.1 333 54.7
PGSC0003DMG401015931 Solanum tuberosum HOM05D004857 ORTHO05D005663 2.7e-77 293.1 332 54.2
COL.COLO4_21204 Corchorus olitorius HOM05D004857 ORTHO05D005663 3.6e-77 292.7 333 53.8
arahy.Tifrunner.gnm1.ann1.N970BB Arachis hypogaea HOM05D004857 ORTHO05D005663 4.6e-77 292.4 344 52.3
Thhalv10001246m.g Eutrema salsugineum HOM05D004857 ORTHO05D005663 1.4e-76 290.8 335 53.4
AT2G26460 Arabidopsis thaliana HOM05D004857 ORTHO05D005663 1.8e-76 290.4 336 53.0
arahy.Tifrunner.gnm1.ann1.N9ATPP Arachis hypogaea HOM05D004857 ORTHO05D005663 2.3e-76 290.0 344 52.0
TWI34G1843 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 2.3e-76 290.0 337 54.6
CsaV3_3G038370 Cucumis sativus L. HOM05D004857 ORTHO05D005663 3.0e-76 289.7 332 54.8
Oeu041809.2 Olea europaea HOM05D004857 ORTHO05D005663 3.9e-76 289.3 392 48.5
ATR0681G246 Amborella trichopoda HOM05D004857 ORTHO05D005663 5.1e-76 288.9 335 54.3
Ciclev10007866m.g Citrus clementina HOM05D004857 ORTHO05D005663 8.8e-76 288.1 341 51.6
FAN19G2563 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.5e-75 287.3 341 51.3
Duzib168G0723 Durio zibethinus HOM05D004857 ORTHO05D005663 2.0e-75 287.0 332 52.7
FAN28G2840 Fragaria x ananassa HOM05D004857 ORTHO05D005663 7.4e-75 285.0 341 50.7
FAN23G0125 Fragaria x ananassa HOM05D004857 ORTHO05D005663 9.7e-75 284.6 341 50.4
MD15G1223900 Malus domestica HOM05D004857 ORTHO05D005663 9.7e-75 284.6 341 50.7
FvH4_1g09440 Fragaria vesca HOM05D004857 ORTHO05D005663 1.3e-74 284.3 340 50.9
FAN26G0201 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.3e-74 284.3 341 50.7
FAN26G1404 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.3e-74 284.3 341 50.7
Lj6g0010651 Lotus japonicus HOM05D004857 ORTHO05D005663 1.3e-74 284.3 336 53.0
EL10Ac4g09573 Beta vulgaris HOM05D004857 ORTHO05D005663 4.8e-74 282.3 302 55.6
THA.LOC104819454 Tarenaya hassleriana HOM05D004857 ORTHO05D005663 4.8e-74 282.3 336 50.0
BcaB08g35315 Brassica carinata HOM05D004857 ORTHO05D005663 6.3e-74 282.0 343 51.6
Hund21824 Selenicereus undatus HOM05D004857 ORTHO05D005663 6.3e-74 282.0 332 53.9
MD02G1102700 Malus domestica HOM05D004857 ORTHO05D005663 1.8e-73 280.4 340 51.8
TWI32G0792 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 2.4e-73 280.0 341 53.7
HanXRQChr12g0355141 Helianthus annuus HOM05D004857 ORTHO05D005663 4.1e-73 279.3 331 54.1
Lsat_1_v5_gn_5_138760 Lactuca sativa HOM05D004857 ORTHO05D005663 9.1e-73 278.1 332 53.0
Aa31LG5G9410 Aethionema arabicum HOM05D004857 ORTHO05D005663 1.2e-72 277.7 365 48.2
Psat1g138640 Pisum sativum HOM05D004857 ORTHO05D005663 1.2e-72 277.7 333 54.1
CANSAT56G1105 Cannabis sativa HOM05D004857 ORTHO05D005663 4.5e-72 275.8 342 49.7
Carub.0004s0646 Capsella rubella HOM05D004857 ORTHO05D005663 5.9e-72 275.4 333 52.3
Medtr2g044200 Medicago truncatula HOM05D004857 ORTHO05D005663 7.7e-72 275.0 333 53.5
BcaC07g40818 Brassica carinata HOM05D004857 ORTHO05D005663 1.3e-71 274.2 349 50.7
C08p38110 Brassica napus HOM05D004857 ORTHO05D005663 1.3e-71 274.2 349 50.7
BolC8t51386H Brassica oleracea HOM05D004857 ORTHO05D005663 1.3e-71 274.2 349 50.7
Lalb_Chr08g0232851 Lupinus albus HOM05D004857 ORTHO05D005663 1.3e-71 274.2 337 51.9
SHI27983 Sapria himalayana HOM05D004857 ORTHO05D005663 3.8e-71 272.7 350 50.9
PSO104G0255 Papaver somniferum HOM05D004857 ORTHO05D005663 5.0e-71 272.3 337 50.7
Sc08g0005030 Simmondsia chinensis HOM05D004857 ORTHO05D005663 6.5e-71 271.9 343 51.0
TPR.G27074 Trifolium pratense HOM05D004857 ORTHO05D005663 1.4e-70 270.8 297 56.2
A09p55180 Brassica napus HOM05D004857 ORTHO05D005663 2.5e-70 270.0 337 51.0
BraA09t40926Z Brassica rapa HOM05D004857 ORTHO05D005663 3.2e-70 269.6 337 50.4
PSO421G0319 Papaver somniferum HOM05D004857 ORTHO05D005663 3.2e-70 269.6 337 51.3
CARHR114530 Cardamine hirsuta HOM05D004857 ORTHO05D005663 4.7e-69 265.8 334 50.9
Os12g0143400 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 6.1e-69 265.4 300 54.7
HPP92_017869 Vanilla planifolia HOM05D004857 ORTHO05D005663 2.3e-68 263.5 326 50.3
Zm00001eb405000 Zea mays HOM05D004857 ORTHO05D005663 1.1e-65 254.6 332 49.4
Os11g0146700 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 1.4e-65 254.2 296 52.7
SEGI_40202 Sequoiadendron giganteum HOM05D004857 ORTHO05D005663 7.0e-65 251.9 305 51.8
CDE05G0890 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 3.5e-64 249.6 305 51.8
ClCG10G017920 Citrullus lanatus HOM05D004857 ORTHO05D005663 5.9e-64 248.8 436 41.7
Oeu000275.2 Olea europaea HOM05D004857 ORTHO05D005663 2.2e-63 246.9 497 38.8
DCAR_024780 Daucus carota HOM05D004857 ORTHO05D005663 5.0e-63 245.7 280 52.9
AUR62006828 Chenopodium quinoa HOM05D004857 ORTHO05D005663 1.5e-62 244.2 305 49.8
AUR62000486 Chenopodium quinoa HOM05D004857 ORTHO05D005663 5.3e-57 225.7 305 45.9
SGA_v2.0_scaffold31G12698 Striga asiatica HOM05D004857 ORTHO05D005663 2.0e-56 223.8 257 52.9
Prupe.7G191600 Prunus persica HOM05D004857 ORTHO05D005663 5.0e-55 219.2 271 51.3
Mapoly0117s0005 Marchantia polymorpha HOM05D004857 ORTHO05D005663 1.9e-54 217.2 308 44.8
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis HOM05D004857 ORTHO05D005663 2.3e-52 210.3 305 45.2
BcaB08g35309 Brassica carinata HOM05D004857 ORTHO05D005663 5.2e-52 209.1 293 47.1
BcaB08g35312 Brassica carinata HOM05D004857 ORTHO05D005663 5.2e-52 209.1 293 47.1
BcaB08g35314 Brassica carinata HOM05D004857 ORTHO05D005663 5.2e-52 209.1 293 47.1
BcaB08g35308 Brassica carinata HOM05D004857 ORTHO05D005663 2.0e-51 207.2 272 50.0
ECA234G1433 Erigeron canadensis HOM05D000959 ORTHO05D000775 2.0e-51 207.2 227 53.7
Peaxi162Scf01184g10017 Petunia axillaris HOM05D004857 ORTHO05D005663 9.8e-51 204.9 253 52.2
Pp3c19_4680 Physcomitrium patens HOM05D004857 ORTHO05D005663 1.7e-50 204.1 319 42.3
CBR_g41264 Chara braunii HOM05D004857 ORTHO05D005663 1.1e-49 201.4 330 43.3
SMO266G0005 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 4.0e-44 183.0 312 41.7
BcaB08g35313 Brassica carinata HOM05D004857 ORTHO05D005663 9.8e-43 178.3 291 41.9
Haze_26072 Corylus avellana HOM05D004857 ORTHO05D005663 5.9e-40 169.1 155 61.9
HanXRQChr12g0354251 Helianthus annuus HOM05D004857 ORTHO05D005663 1.0e-39 168.3 190 56.3
Cpa.g.sc3709.1 Carica papaya HOM05D004857 ORTHO05D005663 2.9e-39 166.8 130 70.0
CAN.G457.3 Capsicum annuum HOM05D004857 ORTHO05D005663 1.1e-38 164.9 130 69.2
Zm00001eb163350 Zea mays HOM05D004857 ORTHO05D005663 9.5e-38 161.8 239 45.6
Lsat_1_v5_gn_7_48580 Lactuca sativa HOM05D004857 ORTHO05D005663 5.7e-35 152.5 144 62.5
SMO270G0035 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 1.3e-31 141.4 317 36.3
Lsat_1_v5_gn_5_77280 Lactuca sativa HOM05D004857 ORTHO05D005663 1.1e-30 138.3 147 58.5
Lsat_1_v5_gn_3_37601 Lactuca sativa HOM05D004857 ORTHO05D005663 6.8e-28 129.0 190 44.7
Cpa.g.sc82.61 Carica papaya HOM05D004857 ORTHO05D005663 1.2e-21 108.2 140 49.3
CAN.G1728.2 Capsicum annuum HOM05D004857 ORTHO05D005663 2.3e-20 104.0 95 62.1
Atru.chr7.1769 Acer truncatum HOM05D004857 ORTHO05D005663 6.8e-20 102.4 138 47.1
Cre16.g688750 Chlamydomonas reinhardtii HOM05D004857 ORTHO05D005663 4.4e-19 99.8 327 29.4
MCO14G054 Micromonas commoda HOM05D004857 ORTHO05D005663 3.7e-18 96.7 134 45.5
TPR.G21223 Trifolium pratense HOM05D004857 ORTHO05D005663 6.4e-18 95.9 58 81.0
Actinidia02202 Actinidia chinensis HOM05D004857 ORTHO05D005663 3.2e-17 93.6 64 75.0
TAR626G1635 Trochodendron aralioides HOM05D001862 ORTHO05D005663 2.1e-13 80.9 48 81.2
Lsat_1_v5_gn_7_64781 Lactuca sativa HOM05D004857 ORTHO05D005663 1.1e-12 78.6 62 62.9
vmacro05712 Vaccinium macrocarpon HOM05D006033 ORTHO05D005663 1.8e-12 77.8 49 79.6
Actinidia27556 Actinidia chinensis HOM05D004857 ORTHO05D005663 6.8e-12 75.9 65 66.2
ECA234G2807 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.9e-10 69.7 67 58.2
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 3.2e-09 67.0 35 85.7
vmacro12720 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 7.1e-09 65.9 63 60.3
Rhsim09G0048200 Rhododendron simsii HOM05D004857 ORTHO05D005663 3.5e-08 63.5 82 50.0


User provided reference genes

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