Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 6.5e-163 577.4 307 100.0
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 2.2e-102 376.3 268 71.3
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.6e-100 370.2 318 66.0
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.6e-100 370.2 319 64.3
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 4.6e-100 368.6 298 69.1
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 1.3e-99 367.1 300 65.0
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 3.0e-99 365.9 305 68.2
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 3.0e-99 365.9 268 73.1
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 5.1e-99 365.2 267 71.5
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 3.3e-98 362.5 313 64.9
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 4.3e-98 362.1 305 66.2
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 1.6e-97 360.1 315 64.8
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 2.8e-97 359.4 307 65.8
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 8.1e-97 357.8 305 65.6
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 8.1e-97 357.8 302 65.6
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 1.1e-96 357.5 305 65.2
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 1.4e-96 357.1 314 64.3
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.8e-96 356.7 303 65.0
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 2.4e-96 356.3 301 65.4
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 2.4e-96 356.3 314 63.7
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 4.0e-96 355.5 298 64.8
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 5.3e-96 355.1 318 63.5
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 2.0e-95 353.2 320 63.8
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 3.4e-95 352.4 293 65.2
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 3.4e-95 352.4 304 64.1
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 4.5e-95 352.1 258 73.6
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 9.9e-95 350.9 280 66.1
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 1.3e-94 350.5 316 64.6
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 2.2e-94 349.7 296 65.9
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 3.8e-94 349.0 313 61.7
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 3.8e-94 349.0 278 68.3
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 3.8e-94 349.0 302 64.9
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 4.9e-94 348.6 316 63.6
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 6.4e-94 348.2 301 63.5
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 8.4e-94 347.8 278 67.3
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 3.2e-93 345.9 272 64.3
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 5.4e-93 345.1 308 63.0
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 5.4e-93 345.1 319 63.6
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 5.4e-93 345.1 285 66.3
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 9.3e-93 344.4 302 64.2
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 9.3e-93 344.4 265 69.1
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 2.1e-92 343.2 250 73.2
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 2.1e-92 343.2 306 62.4
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 3.5e-92 342.4 312 61.2
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 3.5e-92 342.4 265 68.7
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 4.6e-92 342.0 313 61.7
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 6.0e-92 341.7 272 65.1
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 6.0e-92 341.7 285 64.2
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.3e-91 339.7 316 63.6
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 2.3e-91 339.7 310 62.6
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 2.3e-91 339.7 307 61.2
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 8.7e-91 337.8 317 60.3
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 8.7e-91 337.8 303 60.7
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 1.1e-90 337.4 294 62.6
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.5e-90 337.0 306 62.4
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 4.3e-90 335.5 317 62.5
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 9.6e-90 334.3 299 62.9
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 9.6e-90 334.3 277 65.3
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.6e-89 333.6 311 61.1
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 1.6e-89 333.6 292 61.3
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 1.6e-89 333.6 292 61.3
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 2.1e-89 333.2 298 63.4
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 4.0e-88 328.9 315 59.0
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 5.3e-88 328.6 307 61.2
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 9.0e-88 327.8 295 61.4
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 9.0e-88 327.8 322 59.6
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 1.2e-87 327.4 315 58.7
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 1.2e-87 327.4 288 63.2
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 1.5e-87 327.0 311 59.2
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 1.5e-87 327.0 250 70.4
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 2.6e-87 326.2 306 60.5
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 9.9e-87 324.3 276 63.0
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.3e-86 323.9 247 66.8
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.3e-86 323.9 307 60.3
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 1.3e-86 323.9 292 62.0
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 2.9e-86 322.8 285 62.1
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 2.9e-86 322.8 319 60.8
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 3.8e-86 322.4 307 60.3
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 3.8e-86 322.4 300 61.3
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 1.4e-85 320.5 313 58.5
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 4.2e-85 318.9 268 64.6
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 5.5e-85 318.5 269 63.9
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 1.2e-84 317.4 320 58.1
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 6.0e-84 315.1 276 62.0
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 6.0e-84 315.1 225 70.7
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 1.0e-83 314.3 260 62.3
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 1.9e-82 310.1 296 59.8
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.9e-82 310.1 233 68.2
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 1.9e-82 310.1 287 61.0
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 5.6e-82 308.5 225 68.4
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 2.1e-81 306.6 266 59.0
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 7.6e-79 298.1 315 57.8
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 1.0e-78 297.7 395 47.3
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 1.7e-78 297.0 227 68.3
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 3.2e-77 292.7 228 66.7
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 1.2e-76 290.8 250 61.6
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 3.0e-75 286.2 277 59.2
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 1.1e-74 284.3 229 66.8
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 2.1e-73 280.0 297 56.6
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 2.1e-73 280.0 186 74.7
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.0e-70 271.2 225 66.2
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 2.8e-65 253.1 271 52.8
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 6.3e-65 251.9 291 54.0
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 2.6e-63 246.5 289 51.9
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 7.7e-63 245.0 188 69.1
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 7.9e-60 235.0 204 64.7
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 3.4e-55 219.5 194 62.4
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.1e-53 214.5 262 50.0
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 1.9e-53 213.8 254 45.7
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 6.7e-51 205.3 320 41.2
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 1.5e-50 204.1 252 47.2
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 7.2e-45 185.3 192 53.1
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 5.7e-42 175.6 185 49.2
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 2.0e-39 167.2 128 61.7
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 2.0e-39 167.2 131 69.5
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 1.2e-36 157.9 125 59.2
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 5.7e-26 122.5 112 65.2
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 2.2e-25 120.6 120 57.5
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 3.7e-25 119.8 99 59.6
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 4.9e-25 119.4 160 46.2
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 1.6e-23 114.4 237 35.9
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 3.0e-19 100.1 88 59.1
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.2e-16 90.1 79 58.2
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 3.0e-14 83.6 68 52.9
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 8.6e-14 82.0 78 55.1
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 6.4e-09 65.9 69 53.6
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 1.2e-07 61.6 35 68.6
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 2.0e-07 60.8 65 56.9
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 2.7e-07 60.5 65 60.0
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 3.9e-06 56.6 46 69.6


User provided reference genes

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