Gene: TPR.G1544

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G1544
  • Transcript Identifier TPR.T1567
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_74 : 70909-85947 : positive

Gene Family Information

  • ID HOM05D000563
  • #Genes/#Species 981/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA1567.v2
  • id Tp57577_TGAC_v2_gene1544.v2
  • pacid 35952576
  • uniprot A0A2K3LXK0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT5G19000
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT5G19000
GO:0042631
ISO
PLAZA Integrative Orthologycellular response to water deprivation AT5G19000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0045735
IEA
GOA Databasenutrient reservoir activity
GO:0045735
IEA
InterPronutrient reservoir activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G19000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G19000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011333 SKP1/BTB/POZ domain superfamily
IPR011051 RmlC-like cupin domain superfamily
IPR006045 Cupin 1
IPR000210 BTB/POZ domain
IPR002083 MATH/TRAF domain
IPR034090 BPM, C-terminal
IPR014710 RmlC-like jelly roll fold
IPR045005 BTB/POZ and MATH domain-containing protein 1-6
IPR002156 Ribonuclease H domain
IPR006044 11-S seed storage protein, plant
IPR008974 TRAF-like
Mapman id Description
17.7.2.3.2 Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (PAC)
19.2.2.8.2.2.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (BPM)