Gene: Solyc09g064790.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g064790.3
  • Transcript Identifier Solyc09g064790.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 58303353-58308687 : positive

Gene Family Information

  • ID HOM05D006016
  • #Genes/#Species 131/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g064790.3.1
  • uniprot A0A3Q7I3H0
  • gene_id Solyc09g064790

Descriptions

  • Description Protein PALE CRESS, chloroplastic (AHRD V3.3 *** A0A2G3BLP0_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
ISO
PLAZA Integrative Orthologyribosome biogenesis AT2G48120
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process AT2G48120
GO:0016117
ISO
PLAZA Integrative Orthologycarotenoid biosynthetic process AT2G48120
GO:0009965
IBA
GOA Databaseleaf morphogenesis
GO:0009658
IBA
IEA
GOA Databasechloroplast organization
GO:0009658
IEA
InterProchloroplast organization
GO:0071482
IBA
GOA Databasecellular response to light stimulus
GO:0010239
IEA
GOA Databasechloroplast mRNA processing
GO:0010239
IEA
InterProchloroplast mRNA processing
GO:0048366
IEA
GOA Databaseleaf development
GO:0048366
IEA
InterProleaf development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT2G48120
GO:0019843
ISO
PLAZA Integrative OrthologyrRNA binding AT2G48120
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT2G48120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
GOA Databasechloroplast
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT2G48120
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G48120
GO:0009513
IBA
GOA Databaseetioplast
GO:0009537
IBA
GOA Databaseproplastid
GO:0009501
IBA
GOA Databaseamyloplast
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IEA
InterProplastid
GO:0009509
IBA
GOA Databasechromoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034563 Protein PALE CRESS
Mapman id Description
17.7.2.3.2 Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (PAC)