Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16677 Utricularia gibba HOM05D003457 ORTHO05D009746 6.6e-168 594.0 301 100.0
SalBow2G2559 Salvia bowleyana HOM05D003457 ORTHO05D009746 1.6e-60 237.3 250 51.6
MSTRG.30 Avicennia marina HOM05D003457 ORTHO05D009746 7.8e-60 235.0 235 55.7
Migut.F00989 Erythranthe guttata HOM05D003457 ORTHO05D009746 3.0e-59 233.0 230 55.2
Oeu061029.1 Olea europaea HOM05D000015 ORTHO05D001173 1.1e-56 224.6 262 48.5
SGA_v2.0_scaffold141G35560 Striga asiatica HOM05D003457 ORTHO05D009746 1.7e-54 217.2 254 48.4
Nitab4.5_0000319g0080 Nicotiana tabacum HOM05D003457 ORTHO05D009746 4.9e-54 215.7 211 53.6
CAN.G303.16 Capsicum annuum HOM05D003457 ORTHO05D009746 1.1e-53 214.5 258 46.9
Sopen03g022020 Solanum pennellii HOM05D003457 ORTHO05D009746 3.2e-53 213.0 258 48.4
Solyc03g081300.4 Solanum lycopersicum HOM05D003457 ORTHO05D009746 4.1e-53 212.6 211 54.5
PGSC0003DMG400000587 Solanum tuberosum HOM05D003457 ORTHO05D009746 9.2e-53 211.5 211 54.0
Nitab4.5_0005040g0020 Nicotiana tabacum HOM05D003457 ORTHO05D009746 1.6e-52 210.7 190 56.3
Peaxi162Scf00300g00834 Petunia axillaris HOM05D003457 ORTHO05D009746 2.1e-52 210.3 207 51.7
Cc02_g00830 Coffea canephora HOM05D003457 ORTHO05D009746 7.3e-50 201.8 186 55.4
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 4.7e-49 199.1 219 49.3
Cpa.g.sc3.154 Carica papaya HOM05D003457 ORTHO05D009746 6.8e-48 195.3 232 45.3
CSS0016304 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009746 3.4e-47 193.0 236 42.8
Haze_00295 Corylus avellana HOM05D003457 ORTHO05D009746 7.5e-47 191.8 239 44.4
Actinidia28281 Actinidia chinensis HOM05D003457 ORTHO05D009746 4.9e-46 189.1 191 51.8
CSS0014628 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009746 4.9e-46 189.1 186 50.0
TWI23G0525 Tripterygium wilfordii HOM05D003457 ORTHO05D009746 7.1e-45 185.3 185 50.8
Cfa016161 Carpinus fangiana HOM05D003457 ORTHO05D009746 9.2e-45 184.9 218 44.5
Aqoxy4G02698 Aquilegia oxysepala HOM05D003457 ORTHO05D009746 1.2e-44 184.5 186 48.9
Manes.05G197700 Manihot esculenta HOM05D003457 ORTHO05D009746 1.2e-44 184.5 186 49.5
DCAR_010575 Daucus carota HOM05D003457 ORTHO05D009746 2.1e-44 183.7 196 45.9
Prupe.2G318700 Prunus persica HOM05D003457 ORTHO05D009746 1.0e-43 181.4 218 45.4
Lj1P1027T26 Lonicera japonica HOM05D003457 ORTHO05D009746 1.1e-42 177.9 186 52.2
Potri.015G005200 Populus trichocarpa HOM05D003457 ORTHO05D009746 1.1e-42 177.9 240 43.3
TAR375G1036 Trochodendron aralioides HOM05D003457 ORTHO05D009746 1.1e-42 177.9 189 49.7
Ah.07g204680 Amaranthus hybridus HOM05D003457 ORTHO05D009746 1.5e-42 177.6 187 51.3
Thecc.03G208500 Theobroma cacao HOM05D003457 ORTHO05D009746 1.5e-42 177.6 196 44.9
Sabra15G0003700 Salix brachista HOM05D003457 ORTHO05D009746 2.5e-42 176.8 186 47.3
EL10Ac3g05181 Beta vulgaris HOM05D003457 ORTHO05D009746 9.5e-42 174.9 186 51.1
CiPaw.06G041300 Carya illinoinensis HOM05D003457 ORTHO05D009746 2.8e-41 173.3 218 42.7
GSVIVG01038641001 Vitis vinifera HOM05D000015 ORTHO05D001173 2.8e-41 173.3 192 46.9
PGR142G0010 Punica granatum HOM05D003457 ORTHO05D009746 3.6e-41 172.9 266 40.2
QL09p007206 Quercus lobata HOM05D003457 ORTHO05D009746 3.6e-41 172.9 193 47.2
Sc13g0010270 Simmondsia chinensis HOM05D003457 ORTHO05D009746 8.1e-41 171.8 185 47.6
Duzib205G0560 Durio zibethinus HOM05D003457 ORTHO05D009746 1.8e-40 170.6 193 45.1
vmacro10157 Vaccinium macrocarpon HOM05D003457 ORTHO05D009746 2.4e-40 170.2 211 43.6
Lsat_1_v5_gn_2_136541 Lactuca sativa HOM05D003457 ORTHO05D009746 1.2e-39 167.9 199 45.7
AUR62035620 Chenopodium quinoa HOM05D003457 ORTHO05D009746 1.5e-39 167.5 186 47.8
COL.COLO4_14369 Corchorus olitorius HOM05D000015 ORTHO05D001173 2.0e-39 167.2 186 44.1
Gorai.012G000800 Gossypium raimondii HOM05D003457 ORTHO05D009746 2.6e-39 166.8 186 44.6
Gohir.D04G000055 Gossypium hirsutum HOM05D003457 ORTHO05D009746 3.4e-39 166.4 186 44.1
Ciclev10023265m.g Citrus clementina HOM05D003457 ORTHO05D009746 5.8e-39 165.6 187 42.8
Phvul.009G045200 Phaseolus vulgaris HOM05D003457 ORTHO05D009746 7.6e-39 165.2 233 39.1
VMungo1309G1701 Vigna mungo HOM05D003457 ORTHO05D009746 9.9e-39 164.9 184 44.0
Glyma.04G228500 Glycine max HOM05D003457 ORTHO05D009746 4.9e-38 162.5 196 41.3
HanXRQChr07g0206571 Helianthus annuus HOM05D003457 ORTHO05D009746 4.9e-38 162.5 192 43.8
Rhsim09G0209500 Rhododendron simsii HOM05D003457 ORTHO05D009746 8.4e-38 161.8 210 42.4
Atru.chr12.2427 Acer truncatum HOM05D003457 ORTHO05D009746 2.4e-37 160.2 190 42.1
RcHm_v2.0_Chr1g0382851 Rosa chinensis HOM05D003457 ORTHO05D009746 2.4e-37 160.2 239 38.5
Eucgr.K00438 Eucalyptus grandis HOM05D003457 ORTHO05D009746 3.2e-37 159.8 253 37.2
BraA10t43244Z Brassica rapa HOM05D003457 ORTHO05D009746 3.5e-36 156.4 260 37.3
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 3.5e-36 156.4 169 49.1
BolC9t57320H Brassica oleracea HOM05D003457 ORTHO05D009746 6.0e-36 155.6 244 37.3
A10p11500 Brassica napus HOM05D003457 ORTHO05D009746 1.0e-35 154.8 244 37.3
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.0e-35 154.8 186 41.4
Hund21057 Selenicereus undatus HOM05D003457 ORTHO05D009746 1.3e-35 154.5 185 45.9
C09p44480 Brassica napus HOM05D003457 ORTHO05D009746 5.1e-35 152.5 244 37.3
FvH4_7g32910 Fragaria vesca HOM05D003457 ORTHO05D009746 5.1e-35 152.5 186 40.9
THA.LOC104811888 Tarenaya hassleriana HOM05D003457 ORTHO05D009746 5.1e-35 152.5 196 40.3
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.5e-34 151.0 186 40.3
Sp6g16240 Schrenkiella parvula HOM05D003457 ORTHO05D009746 1.9e-34 150.6 186 40.9
Lalb_Chr08g0239621 Lupinus albus HOM05D003457 ORTHO05D009746 4.3e-34 149.4 186 42.5
Thhalv10013278m.g Eutrema salsugineum HOM05D003457 ORTHO05D009746 7.3e-34 148.7 186 41.4
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 7.3e-34 148.7 186 40.9
Lj1g0013970 Lotus japonicus HOM05D003457 ORTHO05D009746 7.3e-34 148.7 195 40.0
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 9.6e-34 148.3 186 40.3
Carub.0008s1449 Capsella rubella HOM05D003457 ORTHO05D009746 3.6e-33 146.4 186 40.3
AT5G54180 Arabidopsis thaliana HOM05D003457 ORTHO05D009746 4.7e-33 146.0 186 40.3
CARHR267390 Cardamine hirsuta HOM05D003457 ORTHO05D009746 1.8e-32 144.1 186 39.2
Gohir.D04G000085 Gossypium hirsutum HOM05D003457 ORTHO05D009746 1.8e-32 144.1 159 44.7
Aa31LG3G9830 Aethionema arabicum HOM05D003457 ORTHO05D009746 5.3e-32 142.5 186 39.2
AL8G29400 Arabidopsis lyrata HOM05D003457 ORTHO05D009746 1.2e-31 141.4 208 36.5
ECA238G0072 Erigeron canadensis HOM05D003457 ORTHO05D009746 2.0e-31 140.6 187 40.6
Eucgr.K00434 Eucalyptus grandis HOM05D003457 ORTHO05D009746 2.6e-31 140.2 173 41.0
THA.LOC104799988 Tarenaya hassleriana HOM05D003457 ORTHO05D009746 3.4e-31 139.8 168 40.5
Medtr3g092710 Medicago truncatula HOM05D003457 ORTHO05D009746 1.7e-30 137.5 186 42.5
TPR.G33660 Trifolium pratense HOM05D003457 ORTHO05D009746 5.4e-29 132.5 186 39.8
MBI04_g27236_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009746 6.2e-25 119.0 211 35.5
Eucgr.K00030 Eucalyptus grandis HOM05D003457 ORTHO05D009746 1.2e-23 114.8 159 37.7
Ca_16778_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009746 8.4e-22 108.6 121 47.1
ATR1155G022 Amborella trichopoda HOM05D003457 ORTHO05D009746 9.3e-21 105.1 195 32.3


User provided reference genes

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