Gene: Solyc03g081300.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g081300.4
  • Transcript Identifier Solyc03g081300.4.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 46744558-46746196 : negative

Gene Family Information

  • ID HOM05D003457
  • #Genes/#Species 197/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g081300.4.1
  • uniprot A0A3Q7FMI0
  • gene_id Solyc03g081300

Descriptions

  • Description Mitochodrial transcription termination factor-related protein (AHRD V3.3 *** A0A2U1LA74_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006353
IEA
GOA DatabaseDNA-templated transcription, termination
GO:0009658
IBA
GOA Databasechloroplast organization
GO:0032502
IBA
GOA Databasedevelopmental process
GO:0006393
ISO
PLAZA Integrative Orthologytermination of mitochondrial transcription AT5G54180
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT5G54180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IEA
GOA Databasedouble-stranded DNA binding
GO:0003690
IEA
InterProdouble-stranded DNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G54180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
GOA Databasechloroplast
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT5G54180
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT5G54180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003690 Transcription termination factor, mitochondrial/chloroplastic
IPR038538 MTERF superfamily, mitochondrial/chloroplastic
Mapman id Description
15.6.1.2.3.5 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC15
15.6.2.2 RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF)