Gene: Sopen03g022020

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g022020
  • Transcript Identifier Sopen03g022020.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 53552401-53554039 : negative

Gene Family Information

  • ID HOM05D003457
  • #Genes/#Species 197/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g022020.1

Descriptions

  • Description plastid transcriptionally active 15 (PTAC15) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plastid chromosome, chloroplast, nucleoid | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related | BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006393
ISO
PLAZA Integrative Orthologytermination of mitochondrial transcription AT5G54180
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT5G54180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IEA
InterProdouble-stranded DNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G54180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT5G54180
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G54180
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT5G54180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003690 Transcription termination factor, mitochondrial/chloroplastic
IPR038538 MTERF superfamily, mitochondrial/chloroplastic
Mapman id Description
15.6.1.2.3.5 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC15
15.6.2.2 RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF)