Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_52.g17545 Utricularia gibba HOM05D006408 ORTHO05D008038 2.7e-183 645.2 321 100.0
Nitab4.5_0001168g0170 Nicotiana tabacum HOM05D006408 ORTHO05D008038 1.5e-125 453.4 286 78.7
Sopen04g025710 Solanum pennellii HOM05D006408 ORTHO05D008038 2.5e-125 452.6 285 76.8
Peaxi162Scf00066g00222 Petunia axillaris HOM05D006408 ORTHO05D008038 4.3e-125 451.8 277 80.1
MSTRG.22398 Avicennia marina HOM05D006408 ORTHO05D008038 7.4e-125 451.1 327 73.1
Solyc04g057870.3 Solanum lycopersicum HOM05D006408 ORTHO05D008038 9.6e-125 450.7 285 76.5
PGSC0003DMG400028061 Solanum tuberosum HOM05D006408 ORTHO05D008038 4.8e-124 448.4 285 79.6
Cfa018129 Carpinus fangiana HOM05D006408 ORTHO05D008038 1.8e-123 446.4 295 73.6
MELO3C010512.2 Cucumis melo HOM05D006408 ORTHO05D008038 3.1e-123 445.7 285 75.4
ClCG11G015980 Citrullus lanatus HOM05D006408 ORTHO05D008038 9.0e-123 444.1 280 76.1
CsaV3_4G028270 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.2e-122 443.7 285 75.1
CANSAT25G1301 Cannabis sativa HOM05D006408 ORTHO05D008038 1.5e-122 443.4 282 74.1
CAN.G288.5 Capsicum annuum HOM05D006408 ORTHO05D008038 2.0e-122 443.0 286 74.8
Sp1g19130 Schrenkiella parvula HOM05D006408 ORTHO05D008038 2.6e-122 442.6 293 73.7
TAR628G0457 Trochodendron aralioides HOM05D006408 ORTHO05D008038 3.4e-122 442.2 285 74.0
Migut.N03260 Erythranthe guttata HOM05D006408 ORTHO05D008038 6.4e-121 438.0 325 71.7
Cc10_g13760 Coffea canephora HOM05D006408 ORTHO05D008038 1.4e-120 436.8 282 77.3
Cpa.g.sc26.317 Carica papaya HOM05D006408 ORTHO05D008038 2.5e-120 436.0 282 74.5
CiPaw.16G022700 Carya illinoinensis HOM05D006408 ORTHO05D008038 3.2e-120 435.6 280 75.0
CARHR021960 Cardamine hirsuta HOM05D006408 ORTHO05D008038 4.2e-120 435.3 278 75.2
Aqoxy5G02393 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 1.2e-119 433.7 287 72.8
PGR083G0137 Punica granatum HOM05D006408 ORTHO05D008038 1.2e-119 433.7 277 76.2
Manes.02G168400 Manihot esculenta HOM05D006408 ORTHO05D008038 3.5e-119 432.2 273 76.2
THA.LOC104814021 Tarenaya hassleriana HOM05D006408 ORTHO05D008038 3.5e-119 432.2 278 74.5
MBI03_g48069_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 4.6e-119 431.8 285 71.9
PSO017G3385 Papaver somniferum HOM05D006408 ORTHO05D008038 7.9e-119 431.0 282 74.1
PSO170G2303 Papaver somniferum HOM05D006408 ORTHO05D008038 7.9e-119 431.0 282 74.1
RcHm_v2.0_Chr6g0296711 Rosa chinensis HOM05D006408 ORTHO05D008038 2.3e-118 429.5 284 71.8
Aa31LG7G5580 Aethionema arabicum HOM05D006408 ORTHO05D008038 5.1e-118 428.3 331 65.6
Nn1g08961 Nelumbo nucifera HOM05D006408 ORTHO05D008038 8.7e-118 427.6 308 68.2
EL10Ac1g01346 Beta vulgaris HOM05D006408 ORTHO05D008038 1.1e-117 427.2 279 75.3
Thecc.08G133100 Theobroma cacao HOM05D006408 ORTHO05D008038 1.1e-117 427.2 289 73.4
Gorai.005G087700 Gossypium raimondii HOM05D006408 ORTHO05D008038 1.9e-117 426.4 284 72.2
Potri.002G078900 Populus trichocarpa HOM05D006408 ORTHO05D008038 4.3e-117 425.2 274 75.9
MD08G1159400 Malus domestica HOM05D006408 ORTHO05D008038 5.6e-117 424.9 283 71.4
Prupe.1G489500 Prunus persica HOM05D006408 ORTHO05D008038 5.6e-117 424.9 282 71.3
AL1G34740 Arabidopsis lyrata HOM05D006408 ORTHO05D008038 7.4e-117 424.5 277 73.6
Hma1.2p1_1121F.1_g259280 Hydrangea macrophylla HOM05D006408 ORTHO05D008038 9.6e-117 424.1 279 75.3
CSS0036755 Camellia sinensis var. sinensis HOM05D006408 ORTHO05D008038 1.6e-116 423.3 282 76.6
CDE06G0572 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 8.2e-116 421.0 287 70.7
A06p17690 Brassica napus HOM05D006408 ORTHO05D008038 1.4e-115 420.2 278 73.0
BraA06t24861Z Brassica rapa HOM05D006408 ORTHO05D008038 1.4e-115 420.2 278 73.0
FAN20G2488 Fragaria x ananassa HOM05D006408 ORTHO05D008038 2.4e-115 419.5 284 73.9
HanXRQChr02g0045521 Helianthus annuus HOM05D006408 ORTHO05D008038 4.0e-115 418.7 291 69.8
Sed0021255 Sechium edule HOM05D006408 ORTHO05D008038 4.0e-115 418.7 315 70.2
Atru.chr13.1568 Acer truncatum HOM05D006408 ORTHO05D008038 5.3e-115 418.3 276 72.1
Oeu047179.2 Olea europaea HOM05D006408 ORTHO05D008038 5.3e-115 418.3 288 74.7
C05p20590 Brassica napus HOM05D006408 ORTHO05D008038 6.9e-115 417.9 278 72.7
BolC5t30757H Brassica oleracea HOM05D006408 ORTHO05D008038 6.9e-115 417.9 278 72.7
Glyma.04G087000 Glycine max HOM05D006408 ORTHO05D008038 6.9e-115 417.9 277 72.2
AT1G21600 Arabidopsis thaliana HOM05D006408 ORTHO05D008038 2.0e-114 416.4 277 75.8
Eucgr.A00239 Eucalyptus grandis HOM05D006408 ORTHO05D008038 2.0e-114 416.4 289 75.8
Actinidia15213 Actinidia chinensis HOM05D006408 ORTHO05D008038 5.8e-114 414.8 295 71.5
Ca_16607_v3 Cicer arietinum L. HOM05D006408 ORTHO05D008038 5.8e-114 414.8 279 72.8
Glyma.06G117500 Glycine max HOM05D006408 ORTHO05D008038 1.0e-113 414.1 320 65.3
FAN24G2159 Fragaria x ananassa HOM05D006408 ORTHO05D008038 1.7e-113 413.3 284 74.3
Phvul.009G129900 Phaseolus vulgaris HOM05D006408 ORTHO05D008038 4.9e-113 411.8 283 70.0
Ciclev10001886m.g Citrus clementina HOM05D006408 ORTHO05D008038 6.5e-113 411.4 325 67.1
FAN27G1901 Fragaria x ananassa HOM05D006408 ORTHO05D008038 1.4e-112 410.2 284 72.5
VMungo1309G0712 Vigna mungo HOM05D006408 ORTHO05D008038 5.5e-112 408.3 283 70.0
DCAR_003587 Daucus carota HOM05D006408 ORTHO05D008038 7.1e-112 407.9 250 75.6
Psat5g084760 Pisum sativum HOM05D006408 ORTHO05D008038 1.2e-111 407.1 283 70.0
Lj4A682G50 Lonicera japonica HOM05D006408 ORTHO05D008038 1.6e-111 406.8 248 78.6
Medtr3g088605 Medicago truncatula HOM05D006408 ORTHO05D008038 2.7e-111 406.0 279 70.6
CDE04G0676 Ceratophyllum demersum HOM05D006408 ORTHO05D008038 3.5e-111 405.6 296 66.9
ATR0568G086 Amborella trichopoda HOM05D006408 ORTHO05D008038 7.9e-111 404.4 280 69.6
Lalb_Chr08g0241101 Lupinus albus HOM05D006408 ORTHO05D008038 1.0e-110 404.1 276 70.3
TPR.G28811 Trifolium pratense HOM05D006408 ORTHO05D008038 2.3e-110 402.9 284 69.7
Carub.0001s2103 Capsella rubella HOM05D006408 ORTHO05D008038 1.1e-109 400.6 225 81.8
BcaC05g26077 Brassica carinata HOM05D006408 ORTHO05D008038 5.7e-109 398.3 278 73.4
QL09p032485 Quercus lobata HOM05D006408 ORTHO05D008038 1.6e-108 396.7 223 81.2
Gohir.D02G078200 Gossypium hirsutum HOM05D006408 ORTHO05D008038 2.8e-108 396.0 284 71.5
FAN15G0171 Fragaria x ananassa HOM05D006408 ORTHO05D008038 6.3e-108 394.8 253 73.1
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 1.8e-107 393.3 293 68.3
GSVIVG01008807001 Vitis vinifera HOM05D006408 ORTHO05D008038 1.8e-107 393.3 222 82.0
Lsat_1_v5_gn_1_7780 Lactuca sativa HOM05D006408 ORTHO05D008038 4.1e-107 392.1 287 69.7
BcaB07g32155 Brassica carinata HOM05D006408 ORTHO05D008038 5.3e-107 391.7 293 70.6
arahy.Tifrunner.gnm1.ann1.227FW7 Arachis hypogaea HOM05D006408 ORTHO05D008038 9.0e-107 391.0 271 71.6
HPP92_009911 Vanilla planifolia HOM05D006408 ORTHO05D008038 2.0e-106 389.8 282 67.4
arahy.Tifrunner.gnm1.ann1.8X384Y Arachis hypogaea HOM05D006408 ORTHO05D008038 3.4e-106 389.0 271 71.2
FvH4_2g27850 Fragaria vesca HOM05D006408 ORTHO05D008038 6.5e-105 384.8 227 78.0
Lj1g0002290 Lotus japonicus HOM05D006408 ORTHO05D008038 3.6e-103 379.0 286 68.2
Ah.10g032560 Amaranthus hybridus HOM05D006408 ORTHO05D008038 1.3e-100 370.5 278 68.0
SGA_v2.0_scaffold25G11139 Striga asiatica HOM05D006408 ORTHO05D008038 1.5e-98 363.6 360 56.4
BolC8t49731H Brassica oleracea HOM05D006408 ORTHO05D008038 3.8e-97 359.0 336 56.8
A08p28910 Brassica napus HOM05D006408 ORTHO05D008038 5.5e-96 355.1 205 80.0
Nitab4.5_0003978g0010 Nicotiana tabacum HOM05D006408 ORTHO05D008038 6.7e-94 348.2 219 80.8
Gohir.A02G071000 Gossypium hirsutum HOM05D006408 ORTHO05D008038 6.3e-92 341.7 288 63.9
Hund17341 Selenicereus undatus HOM05D006408 ORTHO05D008038 2.6e-90 336.3 246 70.3
Os11g0110100 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 5.9e-90 335.1 233 66.1
Os12g0110400 Oryza sativa ssp. japonica HOM05D006408 ORTHO05D008038 7.7e-90 334.7 234 65.8
Zm00001eb195160 Zea mays HOM05D006408 ORTHO05D008038 1.7e-89 333.6 257 60.3
Thhalv10007813m.g Eutrema salsugineum HOM05D006408 ORTHO05D008038 9.4e-88 327.8 208 75.5
Rhsim06G0091400 Rhododendron simsii HOM05D006408 ORTHO05D008038 1.8e-86 323.6 439 46.5
AUR62007717 Chenopodium quinoa HOM05D006408 ORTHO05D008038 6.7e-86 321.6 279 60.2
AUR62013426 Chenopodium quinoa HOM05D006408 ORTHO05D008038 1.5e-85 320.5 279 59.9
Sc26g0002930 Simmondsia chinensis HOM05D006408 ORTHO05D008038 6.3e-84 315.1 214 71.0
SEGI_15088 Sequoiadendron giganteum HOM05D006408 ORTHO05D008038 8.8e-78 294.7 219 60.3
C08p20930 Brassica napus HOM05D006408 ORTHO05D008038 1.8e-75 287.0 250 59.2
Mapoly0008s0219 Marchantia polymorpha HOM05D006408 ORTHO05D008038 2.4e-75 286.6 250 54.4
vmacro20822 Vaccinium macrocarpon HOM05D006408 ORTHO05D008038 2.2e-73 280.0 167 79.0
Pp3c1_1000 Physcomitrium patens HOM05D006408 ORTHO05D008038 1.9e-72 276.9 283 50.9
Duzib093G1884 Durio zibethinus HOM05D006408 ORTHO05D008038 1.4e-67 260.8 224 59.8
COL.COLO4_06961 Corchorus olitorius HOM05D006408 ORTHO05D008038 1.6e-63 247.3 222 63.1
BraA08t34821Z Brassica rapa HOM05D006408 ORTHO05D008038 2.0e-61 240.4 144 77.1
SMO146G0302 Selaginella moellendorffii HOM05D006408 ORTHO05D008038 9.8e-61 238.0 208 54.3
CsaV3_5G019980 Cucumis sativus L. HOM05D006408 ORTHO05D008038 4.9e-60 235.7 213 55.9
SalBow2G2951 Salvia bowleyana HOM05D006408 ORTHO05D008038 4.9e-60 235.7 225 62.2
CsaV3_UNG224650 Cucumis sativus L. HOM05D006408 ORTHO05D008038 1.8e-54 217.2 206 55.8
MBI03_g28486_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 5.2e-54 215.7 221 53.8
Dinv14691 Davidia involucrata HOM05D006408 ORTHO05D008038 1.3e-52 211.1 136 75.0
MBI03_g39652_MAGBIO Magnolia biondii HOM05D006408 ORTHO05D008038 6.6e-41 172.2 154 58.4
Sabra02G0061800 Salix brachista HOM05D006408 ORTHO05D008038 8.9e-38 161.8 96 79.2
CBR_g40143 Chara braunii HOM05D006408 ORTHO05D008038 3.2e-35 153.3 175 41.7
Aqoxy219s001 Aquilegia oxysepala HOM05D006408 ORTHO05D008038 2.3e-33 147.1 109 65.1
CsaV3_5G018920 Cucumis sativus L. HOM05D006408 ORTHO05D008038 3.4e-29 133.3 154 48.7
BolC5t30909H Brassica oleracea HOM05D006408 ORTHO05D008038 4.6e-26 122.9 61 88.5
AagrBONN_evm.TU.Sc2ySwM_344.4901 Anthoceros agrestis HOM05D006408 ORTHO05D008038 4.9e-20 102.8 77 62.3
Actinidia21278 Actinidia chinensis HOM05D006408 ORTHO05D008038 1.3e-17 94.7 104 49.0
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.2e-11 73.6 43 79.1
CsaV3_UNG111870 Cucumis sativus L. HOM05D006408 ORTHO05D008038 9.3e-11 72.0 71 54.9
CsaV3_UNG115880 Cucumis sativus L. HOM05D006408 ORTHO05D008038 9.3e-11 72.0 71 54.9


User provided reference genes

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