Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 1.1e-210 736.5 391 100.0
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 2.4e-125 453.0 388 63.1
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 3.1e-125 452.6 381 63.3
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 5.8e-124 448.4 394 64.0
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 1.4e-122 443.7 400 62.8
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 1.6e-121 440.3 395 59.0
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 7.9e-121 438.0 364 62.1
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 3.0e-120 436.0 404 56.7
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 6.6e-120 434.9 399 59.9
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 1.5e-119 433.7 383 58.2
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 2.8e-118 429.5 372 63.4
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 3.6e-118 429.1 352 60.8
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 1.8e-117 426.8 389 56.3
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 4.0e-117 425.6 381 61.7
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 9.0e-117 424.5 311 66.9
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 2.0e-116 423.3 382 61.5
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 2.2e-115 419.9 347 63.7
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 3.8e-115 419.1 352 63.9
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 3.8e-115 419.1 303 67.0
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 3.8e-115 419.1 352 59.9
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 6.4e-115 418.3 392 58.2
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 6.4e-115 418.3 396 57.6
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 4.2e-114 415.6 373 59.5
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 7.1e-114 414.8 395 59.0
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 7.1e-114 414.8 368 62.2
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 9.3e-114 414.5 306 65.7
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 1.2e-113 414.1 341 59.2
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 1.2e-113 414.1 349 60.5
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 2.7e-113 412.9 392 59.7
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 4.6e-113 412.1 468 51.7
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 6.0e-113 411.8 366 60.7
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 1.0e-112 411.0 343 60.6
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 1.8e-112 410.2 392 59.4
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 3.0e-112 409.5 312 63.8
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 3.9e-112 409.1 309 63.4
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 5.1e-112 408.7 349 59.9
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 1.5e-111 407.1 364 57.4
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 1.9e-111 406.8 369 60.7
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 5.6e-111 405.2 394 58.4
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 1.3e-110 404.1 399 57.6
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 1.6e-110 403.7 393 57.8
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 2.8e-110 402.9 393 58.0
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 3.7e-110 402.5 365 60.5
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 4.8e-110 402.1 372 56.2
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 1.1e-109 401.0 394 57.9
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 4.0e-109 399.1 311 62.7
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 6.9e-109 398.3 390 58.5
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 9.0e-109 397.9 393 58.5
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 1.2e-108 397.5 349 58.7
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 4.5e-108 395.6 393 56.7
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 5.8e-108 395.2 367 59.4
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 1.7e-107 393.7 367 59.1
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 2.9e-107 392.9 358 60.3
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 3.8e-107 392.5 380 58.9
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 8.4e-107 391.3 478 49.8
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 1.1e-106 391.0 275 68.4
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 2.5e-106 389.8 362 56.4
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 3.2e-106 389.4 302 62.3
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 3.5e-105 386.0 394 53.0
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 7.9e-105 384.8 455 51.9
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 1.0e-104 384.4 390 54.6
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 3.9e-104 382.5 352 58.2
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 6.7e-104 381.7 399 53.9
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 2.8e-102 376.3 392 55.6
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 6.3e-102 375.2 397 55.7
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 6.3e-102 375.2 393 55.0
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 2.4e-101 373.2 393 55.5
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 2.6e-100 369.8 390 56.7
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 4.5e-100 369.0 396 54.0
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.0e-99 367.9 419 50.4
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 1.3e-99 367.5 302 62.3
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 1.3e-99 367.5 302 61.9
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 1.3e-99 367.5 369 56.9
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 2.2e-99 366.7 303 59.4
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 2.9e-99 366.3 303 61.1
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 6.5e-99 365.2 302 61.6
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 6.5e-99 365.2 390 55.6
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 6.5e-99 365.2 390 55.6
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 6.5e-99 365.2 450 49.8
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 3.2e-98 362.8 302 61.3
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 1.2e-97 360.9 390 54.9
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 1.6e-97 360.5 394 53.3
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.6e-97 360.5 302 61.3
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 1.6e-97 360.5 370 54.3
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 4.6e-97 359.0 409 52.6
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 7.4e-95 351.7 476 47.7
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 7.4e-95 351.7 373 53.4
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 3.1e-93 346.3 401 51.6
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.0e-92 343.6 394 52.5
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 2.6e-92 343.2 347 53.3
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 5.9e-92 342.0 370 53.8
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 4.6e-89 332.4 385 51.2
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 3.0e-88 329.7 390 49.7
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.1e-87 327.8 299 55.9
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 2.5e-87 326.6 392 51.0
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 1.3e-86 324.3 380 50.5
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 1.2e-84 317.8 388 49.0
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 1.2e-84 317.8 388 49.0
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 3.4e-84 316.2 423 44.2
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 7.7e-84 315.1 407 43.2
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 1.7e-83 313.9 366 52.7
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 1.6e-81 307.4 308 52.6
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 1.4e-80 304.3 378 49.2
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 6.7e-80 302.0 379 49.9
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 2.2e-78 297.0 334 50.9
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 3.8e-75 286.2 301 52.8
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 5.3e-69 265.8 335 39.7
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 4.5e-68 262.7 334 43.4
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.1e-66 258.1 321 49.2
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 1.5e-66 257.7 365 48.8
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 4.7e-65 252.7 413 38.5
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 4.8e-62 242.7 144 79.2
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.0e-60 237.3 303 47.2
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 2.7e-57 226.9 280 49.6
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.8e-53 214.2 271 51.3
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 3.6e-49 199.9 238 53.8
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 5.2e-48 196.1 181 53.0
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 6.8e-48 195.7 123 78.0
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 7.0e-45 185.7 267 40.4
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 5.4e-37 159.5 385 29.9
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 3.0e-35 153.7 285 34.0
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 2.2e-30 137.5 185 43.8
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 8.3e-30 135.6 93 71.0
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 5.1e-27 126.3 106 62.3
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 4.4e-23 113.2 134 49.3
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 7.1e-21 105.9 68 69.1
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 6.9e-16 89.4 63 58.7
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 9.9e-15 85.5 63 63.5
MSTRG.15763 Avicennia marina HOM05D005778 ORTHO05D038954 1.6e-09 68.2 109 50.5
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 5.3e-08 63.2 53 58.5
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 9.0e-08 62.4 45 64.4
CARHR113280 Cardamine hirsuta HOM05D000125 ORTHO05D009513 2.2e-06 57.8 50 60.0


User provided reference genes

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