Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 1.7e-162 575.9 274 100.0
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 2.8e-96 355.9 247 69.6
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 2.8e-96 355.9 247 69.6
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 3.6e-96 355.5 249 69.5
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 5.2e-95 351.7 252 67.5
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 5.2e-87 325.1 238 65.1
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 2.2e-85 319.7 255 61.6
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 2.2e-85 319.7 264 59.8
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 8.3e-85 317.8 261 60.2
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 1.1e-84 317.4 254 61.0
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 2.4e-84 316.2 244 62.3
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 3.2e-84 315.8 245 62.0
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 3.2e-84 315.8 262 59.2
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 5.4e-84 315.1 262 59.5
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 9.2e-84 314.3 245 62.9
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 9.2e-84 314.3 248 60.9
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 9.2e-84 314.3 274 55.8
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 1.6e-83 313.5 248 61.3
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 2.0e-83 313.2 264 58.3
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 2.7e-83 312.8 256 58.2
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 4.6e-83 312.0 245 62.4
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 5.9e-83 311.6 249 61.0
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 5.9e-83 311.6 249 60.2
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.0e-82 310.8 246 58.9
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 1.0e-82 310.8 247 61.9
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 2.3e-82 309.7 264 56.1
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 5.0e-82 308.5 259 59.1
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 8.6e-82 307.8 261 57.5
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 1.1e-81 307.4 240 62.1
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 1.5e-81 307.0 245 60.0
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 1.9e-81 306.6 244 59.0
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 2.5e-81 306.2 245 61.2
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 4.3e-81 305.4 239 60.7
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 7.3e-81 304.7 250 58.0
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.2e-80 303.9 244 58.6
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 2.1e-80 303.1 257 58.8
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 3.6e-80 302.4 244 58.2
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 1.1e-79 300.8 245 58.8
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 1.1e-79 300.8 248 59.3
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 1.4e-79 300.4 263 56.7
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 1.8e-79 300.1 261 57.5
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 6.8e-79 298.1 241 60.2
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 6.8e-79 298.1 242 60.3
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 6.8e-79 298.1 253 56.1
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 8.9e-79 297.7 227 63.4
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 1.2e-78 297.4 249 59.8
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 2.0e-78 296.6 248 58.9
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 2.6e-78 296.2 252 57.1
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 3.4e-78 295.8 242 60.3
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 9.8e-78 294.3 249 59.4
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 3.7e-77 292.4 256 57.0
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 3.7e-77 292.4 261 56.7
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 3.7e-77 292.4 248 56.0
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 1.1e-76 290.8 240 59.2
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 1.1e-76 290.8 274 54.0
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.9e-76 290.0 229 60.3
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 3.2e-76 289.3 254 57.5
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 3.2e-76 289.3 254 57.5
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 3.2e-76 289.3 254 57.5
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 4.1e-76 288.9 272 54.8
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 7.0e-76 288.1 253 56.9
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 7.0e-76 288.1 257 56.8
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 7.0e-76 288.1 239 56.9
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 9.2e-76 287.7 251 57.8
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 9.2e-76 287.7 252 57.1
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 9.2e-76 287.7 238 58.4
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 1.2e-75 287.3 247 55.9
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 1.2e-75 287.3 251 57.0
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 2.0e-75 286.6 239 56.5
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 2.7e-75 286.2 244 58.2
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 6.0e-75 285.0 241 60.6
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 1.0e-74 284.3 245 55.1
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 1.3e-74 283.9 250 56.8
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 6.6e-74 281.6 244 57.0
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.1e-73 280.8 244 56.1
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 1.1e-73 280.8 243 54.3
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 2.5e-73 279.6 243 56.0
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 2.5e-73 279.6 282 51.8
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 5.6e-73 278.5 244 55.7
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 7.3e-73 278.1 256 54.7
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 1.6e-72 276.9 262 50.4
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 2.1e-72 276.6 245 56.7
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 1.9e-68 263.5 229 57.6
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 1.2e-67 260.8 249 53.4
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 6.6e-66 255.0 171 67.3
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 1.4e-63 247.3 193 63.7
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 6.8e-63 245.0 195 61.5
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 1.2e-62 244.2 226 55.8
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 1.5e-62 243.8 151 70.9
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 8.4e-61 238.0 152 68.4
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.9e-60 236.9 149 71.8
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 7.8e-59 231.5 192 61.5
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.3e-58 230.7 155 61.9
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 5.6e-57 225.3 159 64.2
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 3.4e-54 216.1 301 39.2
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 5.8e-54 215.3 190 55.8
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 1.3e-53 214.2 254 44.9
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 6.4e-53 211.8 192 55.7
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 9.9e-46 188.0 256 39.5
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 3.8e-45 186.0 187 52.9
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 3.5e-43 179.5 229 41.0
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 1.5e-33 147.5 145 43.4
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 2.5e-33 146.7 138 52.9
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 6.9e-31 138.7 103 63.1
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 4.9e-29 132.5 134 50.0
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 9.7e-25 118.2 138 48.6
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 3.2e-20 103.2 206 30.6
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 9.1e-15 85.1 65 66.2
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 1.2e-14 84.7 99 48.5
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 2.0e-14 84.0 286 29.0
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 2.2e-13 80.5 62 67.7
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 8.5e-13 78.6 194 29.4
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 1.4e-12 77.8 56 57.1
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 3.9e-10 69.7 56 57.1
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 5.1e-10 69.3 164 29.9
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 2.0e-09 67.4 69 44.9
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 1.5e-06 57.8 156 28.8
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 2.0e-06 57.4 41 61.0


User provided reference genes

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