Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12155 Utricularia gibba HOM05D006172 ORTHO05D005515 1.7e-61 239.2 123 100.0
Migut.M01317 Erythranthe guttata HOM05D006172 ORTHO05D005515 2.1e-32 142.5 106 65.1
SGA_v2.0_scaffold4G01916 Striga asiatica HOM05D006172 ORTHO05D005515 5.3e-31 137.9 94 73.4
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 4.9e-29 131.3 103 62.1
Oeu013636.1 Olea europaea HOM05D006172 ORTHO05D005515 4.9e-29 131.3 103 62.1
Cc09_g01690 Coffea canephora HOM05D006172 ORTHO05D005515 1.9e-28 129.4 94 68.1
VMungo1215G3219 Vigna mungo HOM05D006172 ORTHO05D005515 1.9e-28 129.4 124 56.5
Solyc05g055610.4 Solanum lycopersicum HOM05D006172 ORTHO05D005515 4.2e-28 128.3 102 60.8
ECA236G0092 Erigeron canadensis HOM05D006172 ORTHO05D005515 7.1e-28 127.5 95 64.2
Glyma.07G260400 Glycine max HOM05D006172 ORTHO05D005515 7.1e-28 127.5 127 53.5
Nitab4.5_0000096g0040 Nicotiana tabacum HOM05D006172 ORTHO05D005515 7.1e-28 127.5 115 55.7
Sopen05g034060 Solanum pennellii HOM05D006172 ORTHO05D005515 9.3e-28 127.1 102 59.8
Nitab4.5_0006322g0020 Nicotiana tabacum HOM05D006172 ORTHO05D005515 1.2e-27 126.7 114 57.9
Actinidia28669 Actinidia chinensis HOM05D006172 ORTHO05D005515 1.6e-27 126.3 122 51.6
Thhalv10028391m.g Eutrema salsugineum HOM05D006172 ORTHO05D005515 2.7e-27 125.6 127 53.5
CANSAT56G2229 Cannabis sativa HOM05D006172 ORTHO05D005515 3.5e-27 125.2 126 51.6
Sp6g04230 Schrenkiella parvula HOM05D006172 ORTHO05D005515 4.6e-27 124.8 127 53.5
PGR042G0524 Punica granatum HOM05D006172 ORTHO05D005515 6.0e-27 124.4 121 54.5
Psat4g006680 Pisum sativum HOM05D006172 ORTHO05D005515 1.3e-26 123.2 128 50.8
Haze_06799 Corylus avellana HOM05D006172 ORTHO05D005515 1.8e-26 122.9 123 52.8
TAR626G1786 Trochodendron aralioides HOM05D006172 ORTHO05D005515 2.3e-26 122.5 104 60.6
arahy.Tifrunner.gnm1.ann1.GS5NL2 Arachis hypogaea HOM05D006172 ORTHO05D005515 3.0e-26 122.1 129 51.2
Cpa.g.sc152.15 Carica papaya HOM05D006172 ORTHO05D005515 3.9e-26 121.7 129 52.7
A03p30170 Brassica napus HOM05D006172 ORTHO05D005515 5.1e-26 121.3 123 53.7
BraA03t12201Z Brassica rapa HOM05D006172 ORTHO05D005515 5.1e-26 121.3 123 53.7
Carub.0006s3250 Capsella rubella HOM05D006172 ORTHO05D005515 5.1e-26 121.3 127 52.0
Rhsim13G0154200 Rhododendron simsii HOM05D006172 ORTHO05D005515 5.1e-26 121.3 123 52.0
MELO3C007389.2 Cucumis melo HOM05D006172 ORTHO05D005515 6.7e-26 120.9 126 52.4
arahy.Tifrunner.gnm1.ann1.3R4FRS Arachis hypogaea HOM05D006172 ORTHO05D005515 8.7e-26 120.6 129 50.4
HanXRQChr05g0129541 Helianthus annuus HOM05D006172 ORTHO05D005515 8.7e-26 120.6 121 50.4
HanXRQChr05g0129551 Helianthus annuus HOM05D006172 ORTHO05D005515 8.7e-26 120.6 121 50.4
Sed0002789 Sechium edule HOM05D006172 ORTHO05D005515 8.7e-26 120.6 100 63.0
Lj4g0023330 Lotus japonicus HOM05D006172 ORTHO05D005515 1.1e-25 120.2 126 52.4
Lalb_Chr13g0304211 Lupinus albus HOM05D006172 ORTHO05D005515 1.1e-25 120.2 95 66.3
THA.LOC104813121 Tarenaya hassleriana HOM05D006172 ORTHO05D005515 1.1e-25 120.2 100 61.0
ClCG01G022000 Citrullus lanatus HOM05D006172 ORTHO05D005515 1.5e-25 119.8 126 51.6
Sabra04G0007400 Salix brachista HOM05D006172 ORTHO05D005515 1.5e-25 119.8 111 57.7
CARHR252880 Cardamine hirsuta HOM05D006172 ORTHO05D005515 1.9e-25 119.4 128 51.6
Ca_21083_v3 Cicer arietinum L. HOM05D006172 ORTHO05D005515 1.9e-25 119.4 124 50.8
COL.COLO4_31773 Corchorus olitorius HOM05D006172 ORTHO05D005515 1.9e-25 119.4 126 50.8
Gohir.A05G170200 Gossypium hirsutum HOM05D006172 ORTHO05D005515 1.9e-25 119.4 110 55.5
Peaxi162Scf00627g00035 Petunia axillaris HOM05D006172 ORTHO05D005515 2.5e-25 119.0 107 55.1
Aa31LG9G9740 Aethionema arabicum HOM05D006172 ORTHO05D005515 3.3e-25 118.6 127 51.2
AL6G48130 Arabidopsis lyrata HOM05D006172 ORTHO05D005515 3.3e-25 118.6 127 51.2
AT4G04670 Arabidopsis thaliana HOM05D006172 ORTHO05D005515 3.3e-25 118.6 127 51.2
CSS0038964 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 3.3e-25 118.6 101 58.4
GSVIVG01012726001 Vitis vinifera HOM05D006172 ORTHO05D005515 3.3e-25 118.6 107 56.1
QL05p073195 Quercus lobata HOM05D006172 ORTHO05D005515 4.3e-25 118.2 128 50.0
C03p36400 Brassica napus HOM05D006172 ORTHO05D005515 5.7e-25 117.9 127 52.0
BolC3t15953H Brassica oleracea HOM05D006172 ORTHO05D005515 5.7e-25 117.9 127 52.0
vmacro03686 Vaccinium macrocarpon HOM05D006172 ORTHO05D005515 5.7e-25 117.9 92 63.0
SHI02199 Sapria himalayana HOM05D006172 ORTHO05D005515 7.4e-25 117.5 119 55.5
BcaB01g02576 Brassica carinata HOM05D006172 ORTHO05D005515 9.7e-25 117.1 91 63.7
Duzib192G0085 Durio zibethinus HOM05D006172 ORTHO05D005515 9.7e-25 117.1 126 50.8
Lsat_1_v5_gn_7_15980 Lactuca sativa HOM05D006172 ORTHO05D005515 9.7e-25 117.1 124 47.6
Medtr4g132120 Medicago truncatula HOM05D006172 ORTHO05D005515 1.3e-24 116.7 128 50.0
CAN.G694.33 Capsicum annuum HOM05D006172 ORTHO05D005515 1.6e-24 116.3 93 60.2
Gohir.D05G173300 Gossypium hirsutum HOM05D006172 ORTHO05D005515 2.2e-24 115.9 126 50.0
Gorai.009G178500 Gossypium raimondii HOM05D006172 ORTHO05D005515 2.2e-24 115.9 126 50.0
MD10G1321300 Malus domestica HOM05D006172 ORTHO05D005515 2.2e-24 115.9 113 54.0
RcHm_v2.0_Chr5g0003171 Rosa chinensis HOM05D006172 ORTHO05D005515 2.2e-24 115.9 104 58.7
CSS0050420 Camellia sinensis var. sinensis HOM05D006172 ORTHO05D005515 3.7e-24 115.2 121 51.2
Nn1g07129 Nelumbo nucifera HOM05D006172 ORTHO05D005515 3.7e-24 115.2 106 54.7
Potri.004G015200 Populus trichocarpa HOM05D006172 ORTHO05D005515 8.2e-24 114.0 101 57.4
CAN.G694.35 Capsicum annuum HOM05D006172 ORTHO05D005515 1.1e-23 113.6 94 58.5
DCAR_028182 Daucus carota HOM05D006172 ORTHO05D005515 1.1e-23 113.6 98 58.2
PSO675G8381 Papaver somniferum HOM05D006172 ORTHO05D005515 1.1e-23 113.6 127 48.8
FvH4_3g02080 Fragaria vesca HOM05D006172 ORTHO05D005515 2.4e-23 112.5 94 61.7
FAN21G3941 Fragaria x ananassa HOM05D006172 ORTHO05D005515 2.4e-23 112.5 94 61.7
FAN25G0496 Fragaria x ananassa HOM05D006172 ORTHO05D005515 1.5e-22 109.8 94 60.6
Ah.09g234910 Amaranthus hybridus HOM05D006172 ORTHO05D005515 4.5e-22 108.2 105 52.4
Aqoxy1G02151 Aquilegia oxysepala HOM05D006172 ORTHO05D005515 7.6e-22 107.5 99 55.6
Ciclev10018338m.g Citrus clementina HOM05D006172 ORTHO05D005515 7.6e-22 107.5 105 52.4
EL10Ac8g20057 Beta vulgaris HOM05D006172 ORTHO05D005515 1.0e-21 107.1 112 49.1
TWI38G1682 Tripterygium wilfordii HOM05D006172 ORTHO05D005515 1.7e-21 106.3 129 45.7
Lj1A1230T62 Lonicera japonica HOM05D006172 ORTHO05D005515 2.2e-21 105.9 105 52.4
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 2.9e-21 105.5 122 47.5
ATR0794G123 Amborella trichopoda HOM05D006172 ORTHO05D005515 1.1e-20 103.6 97 55.7
Hund21409 Selenicereus undatus HOM05D006172 ORTHO05D005515 1.1e-20 103.6 96 52.1
AUR62021945 Chenopodium quinoa HOM05D006172 ORTHO05D005515 1.4e-20 103.2 94 55.3
Atru.chr10.2219 Acer truncatum HOM05D006172 ORTHO05D005515 5.5e-20 101.3 94 53.2
Atru.chr10.2224 Acer truncatum HOM05D006172 ORTHO05D005515 5.5e-20 101.3 94 53.2
Sc05g0009220 Simmondsia chinensis HOM05D006172 ORTHO05D005515 3.6e-19 98.6 99 50.5
Sc05g0009930 Simmondsia chinensis HOM05D006172 ORTHO05D005515 3.6e-19 98.6 99 50.5
CDE11G0148 Ceratophyllum demersum HOM05D006172 ORTHO05D005515 7.4e-17 90.9 74 63.5
AUR62012709 Chenopodium quinoa HOM05D006172 ORTHO05D005515 7.4e-17 90.9 84 53.6
Eucgr.E04055 Eucalyptus grandis HOM05D006172 ORTHO05D005515 8.2e-16 87.4 103 43.7
SEGI_01208 Sequoiadendron giganteum HOM05D006172 ORTHO05D005515 6.9e-15 84.3 121 43.0
SMO139G0125 Selaginella moellendorffii HOM05D006172 ORTHO05D005515 3.4e-14 82.0 127 36.2
HPP92_012400 Vanilla planifolia HOM05D006172 ORTHO05D005515 1.1e-12 77.0 86 50.0
MCO05G475 Micromonas commoda HOM05D006172 ORTHO05D005515 7.2e-12 74.3 89 40.4
Pp3c9_15020 Physcomitrium patens HOM05D006172 ORTHO05D005515 1.6e-11 73.2 90 46.7
Cre14.g626634 Chlamydomonas reinhardtii HOM05D006172 ORTHO05D005515 2.1e-11 72.8 97 38.1
Mapoly0137s0034 Marchantia polymorpha HOM05D006172 ORTHO05D005515 4.7e-11 71.6 131 37.4
AagrBONN_evm.TU.Sc2ySwM_362.1355 Anthoceros agrestis HOM05D006172 ORTHO05D005515 1.0e-10 70.5 95 41.1
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 9.7e-09 63.9 70 48.6
PRCOL_00000475 Prasinoderma coloniale HOM05D006172 ORTHO05D005515 9.1e-07 57.4 108 35.2
Cfa027274 Carpinus fangiana HOM05D006172 ORTHO05D005515 3.4e-06 55.5 97 36.1


User provided reference genes

Program Settings