Gene: AT4G04670

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G04670
  • Transcript Identifier AT4G04670.1
  • Gene Type Coding gene
  • Location Chr4 : 2367603-2371990 : positive

Gene Family Information

  • ID HOM05D006172
  • #Genes/#Species 128/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G04670.1
  • uniprot Q8W4K1

Descriptions

  • Description Met-10 like family protein / kelch repeat-containing protein
  • Computational description Met-10 like family protein / kelch repeat-containing protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Protein of unknown function Met10 (InterPro:IPR003402), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915), tRNA wybutosine-synthesizing protein (InterPro:IPR003827); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G18610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031591
ISS
Gene Ontologywybutosine biosynthetic process1
GO:0030488
IBA
Gene OntologytRNA methylation2
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0008152
IEA
GOA Databasemetabolic process
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0102522
IEA
Gene OntologytRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity
GO:0008175
IBA
Gene OntologytRNA methyltransferase activity2
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM, IBA
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015915 Kelch-type beta propeller
IPR006652 Kelch repeat type 1
IPR030382 SAM-dependent methyltransferase TRM5/TYW2-type
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR036602 tRNA wybutosine-synthesizing-like superfamily
IPR003827 tRNA wybutosine-synthesizing protein
Mapman id Description
35.1 not assigned.annotated