Gene: Carub.0006s3250
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0006s3250
- Transcript Identifier Carub.0006s3250.1
- Gene Type Coding gene
- Location scaffold_6 : 14713124-14717536 : positive
Gene Family Information
- ID HOM05D006172
- #Genes/#Species 128/97
- Phylogenetic origin
- ID ORTHO05D005515
- #Genes/#Species 156/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0006s3250.v1.1
- pacid 39248137
- synonym Carubv10000136m.g
Descriptions
- Description 2.1.1.282//2.5.1.114 - tRNA(Phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))- methyltransferase / tRNA-yW synthesizing enzyme-3 // tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase / tRNA-yW synthesizing enzyme-2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015915 | Kelch-type beta propeller |
| IPR030382 | SAM-dependent methyltransferase TRM5/TYW2-type |
| IPR036602 | tRNA wybutosine-synthesizing-like superfamily |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR003827 | tRNA wybutosine-synthesizing protein |
| IPR011498 | Kelch repeat type 2 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |